FFCP PHASE1:Mm9::chr15:66392651..66392662,-: Difference between revisions
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|id=chr15:66392651..66392662,- | |id=chr15:66392651..66392662,- | ||
|ontology_enrichment_celltype=CL:0000988!4.75e-09!32;CL:0002032!4.75e-09!32;CL:0000037!4.75e-09!32;CL:0000566!4.75e-09!32;CL:0000837!4.75e-09!32;CL:0002031!9.98e-08!25 | |ontology_enrichment_celltype=CL:0000988!4.75e-09!32;CL:0002032!4.75e-09!32;CL:0000037!4.75e-09!32;CL:0000566!4.75e-09!32;CL:0000837!4.75e-09!32;CL:0002031!9.98e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.68e-09,9;CL:0000789,5.68e-09,9;CL:0002420,5.68e-09,9;CL:0002419,5.68e-09,9;CL:0000790,5.68e-09,9;CL:0000838,8.39e-09,12;CL:0000988,2.57e-08,32;CL:0002032,2.57e-08,32;CL:0000037,2.57e-08,32;CL:0000837,2.57e-08,32;CL:0000542,4.76e-08,13;CL:0000051,4.76e-08,13;CL:0002031,8.92e-08,25;CL:0000738,1.17e-07,17;CL:0002087,1.17e-07,17;CL:0000624,1.90e-07,8;CL:0000084,3.23e-07,11;CL:0000827,3.23e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.77e-09,3;DOID:4045,4.77e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.95e-14!48;UBERON:0002390!1.56e-12!45;UBERON:0003061!1.56e-12!45;UBERON:0002405!2.06e-10!70;UBERON:0004177!6.54e-10!29;UBERON:0003081!1.69e-09!88;UBERON:0003408!7.22e-09!24;UBERON:0006562!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0002370!2.89e-08!23;UBERON:0000974!2.89e-08!23;UBERON:0004807!2.89e-08!23;UBERON:0005058!2.89e-08!23;UBERON:0003351!2.89e-08!23;UBERON:0009113!2.89e-08!23;UBERON:0003295!2.89e-08!23;UBERON:0009722!2.89e-08!23;UBERON:0005562!2.89e-08!23;UBERON:0007690!2.89e-08!23;UBERON:0001004!3.21e-08!42;UBERON:0000072!8.07e-08!27;UBERON:0000065!1.05e-07!41;UBERON:0002530!6.49e-07!65 | |ontology_enrichment_uberon=UBERON:0002193!9.95e-14!48;UBERON:0002390!1.56e-12!45;UBERON:0003061!1.56e-12!45;UBERON:0002405!2.06e-10!70;UBERON:0004177!6.54e-10!29;UBERON:0003081!1.69e-09!88;UBERON:0003408!7.22e-09!24;UBERON:0006562!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0002370!2.89e-08!23;UBERON:0000974!2.89e-08!23;UBERON:0004807!2.89e-08!23;UBERON:0005058!2.89e-08!23;UBERON:0003351!2.89e-08!23;UBERON:0009113!2.89e-08!23;UBERON:0003295!2.89e-08!23;UBERON:0009722!2.89e-08!23;UBERON:0005562!2.89e-08!23;UBERON:0007690!2.89e-08!23;UBERON:0001004!3.21e-08!42;UBERON:0000072!8.07e-08!27;UBERON:0000065!1.05e-07!41;UBERON:0002530!6.49e-07!65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.29e-16,24;UBERON:0002370,8.15e-15,23;UBERON:0000974,8.15e-15,23;UBERON:0004807,8.15e-15,23;UBERON:0005058,8.15e-15,23;UBERON:0003351,8.15e-15,23;UBERON:0009113,8.15e-15,23;UBERON:0003295,8.15e-15,23;UBERON:0009722,8.15e-15,23;UBERON:0005562,8.15e-15,23;UBERON:0007690,8.15e-15,23;UBERON:0006562,4.44e-14,24;UBERON:0001557,4.44e-14,24;UBERON:0001042,4.44e-14,24;UBERON:0008814,4.44e-14,24;UBERON:0009145,4.44e-14,24;UBERON:0002193,3.31e-12,48;UBERON:0002405,3.31e-12,48;UBERON:0000072,3.38e-12,27;UBERON:0002390,1.18e-11,45;UBERON:0003061,1.18e-11,45;UBERON:0004177,3.67e-11,29;UBERON:0005057,3.67e-11,29;UBERON:0007811,7.03e-10,36;UBERON:0000077,8.99e-09,35;UBERON:0002530,1.02e-08,65;UBERON:0001004,4.85e-08,42;UBERON:0000153,8.73e-08,43;UBERON:0000065,4.29e-07,41 | |||
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|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.422366166455,1.17032263160997,0.171217968225505,0.159544317990673,2.05440875917447,3.84649770643589,0.333109761815663,0.404950534779652,0.699561878128147,2.83915948822414,2.87940310572051,0.84877930359606,0,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,11.3003540298965,5.4693474116666,16.2292360631877,14.7057872007754,12.294818729252,8.25367600152961,0,0,0,0,0,0,0,0,0,1.8456086666351,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.529000920747499,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0.11418387971906,2.07150306917737,1.03909497345377,0,1.21786191324856,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0.510914110417183,0.838705871541442,0,1.27070227073065,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.1066395619397,0.257347907114715,0.852490498186778,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0,0.329119699826961,1.14917224855367,0.972825714550269,0.730999937126662,0.658650345873152,0.805238512562231,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.797273843287435,0.327726629431476,0.518054945597687,0.723245292907558,1.50791283939272,0.54390568381871,2.95058563811422,0.275936746304732,0.160550589987792,0,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.36175842301515,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.582961673259701,0,0.341741761595705,0.412773735926445,0.370389054739423,0.188368457004691,0.410082683163076,0.228778173206523,1.69978429993855,2.23922323717853,0.829199842826543,0,0,0,0.216010681643603,0,0,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.314578033277133,0,0,1.58005560314089,0,0.102710957164827,0.389762468933385,0.537080087002444,1.19208812868759,2.04332264183947,1.18151621739662,1.31256384932592,2.28620419965,2.01652370273681,2.14407337627455,2.5977197242889,4.20756847853648,0.453460767230423,0,0,0,0,0.563047426353546,0,0,1.50471631210609,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p4@Tmem71 | |short_description=p4@Tmem71 | ||
}} | }} |
Revision as of 13:58, 13 November 2012
Short description: | p4@Tmem71 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmem71_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -43bp_to_ENSMUST00000048372, NM_172514, uc007wad.1_5end |
EntrezGene: | Tmem71 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.68e-09 | 9 |
alpha-beta T cell | 5.68e-09 | 9 |
immature T cell | 5.68e-09 | 9 |
mature T cell | 5.68e-09 | 9 |
immature alpha-beta T cell | 5.68e-09 | 9 |
lymphoid lineage restricted progenitor cell | 8.39e-09 | 12 |
hematopoietic cell | 2.57e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.57e-08 | 32 |
hematopoietic stem cell | 2.57e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.57e-08 | 32 |
lymphocyte | 4.76e-08 | 13 |
common lymphoid progenitor | 4.76e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 8.92e-08 | 25 |
leukocyte | 1.17e-07 | 17 |
nongranular leukocyte | 1.17e-07 | 17 |
CD4-positive, alpha-beta T cell | 1.90e-07 | 8 |
T cell | 3.23e-07 | 11 |
pro-T cell | 3.23e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 2.29e-16 | 24 |
thymus | 8.15e-15 | 23 |
neck | 8.15e-15 | 23 |
respiratory system epithelium | 8.15e-15 | 23 |
hemolymphoid system gland | 8.15e-15 | 23 |
pharyngeal epithelium | 8.15e-15 | 23 |
thymic region | 8.15e-15 | 23 |
pharyngeal gland | 8.15e-15 | 23 |
entire pharyngeal arch endoderm | 8.15e-15 | 23 |
thymus primordium | 8.15e-15 | 23 |
early pharyngeal endoderm | 8.15e-15 | 23 |
pharynx | 4.44e-14 | 24 |
upper respiratory tract | 4.44e-14 | 24 |
chordate pharynx | 4.44e-14 | 24 |
pharyngeal arch system | 4.44e-14 | 24 |
pharyngeal region of foregut | 4.44e-14 | 24 |
hemolymphoid system | 3.31e-12 | 48 |
immune system | 3.31e-12 | 48 |
segment of respiratory tract | 3.38e-12 | 27 |
hematopoietic system | 1.18e-11 | 45 |
blood island | 1.18e-11 | 45 |
hemopoietic organ | 3.67e-11 | 29 |
immune organ | 3.67e-11 | 29 |
craniocervical region | 7.03e-10 | 36 |
mixed endoderm/mesoderm-derived structure | 8.99e-09 | 35 |
gland | 1.02e-08 | 65 |
respiratory system | 4.85e-08 | 42 |
anterior region of body | 8.73e-08 | 43 |
respiratory tract | 4.29e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.77e-09 | 3 |
muscle cancer | 4.77e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.