FFCP PHASE1:Mm9::chr18:5334307..5334329,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=855|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:5334307..5334329,-|id=chr18:5334307..5334329,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,1.52e-13,9;CL:0000789,1.52e-13,9;CL:0002420,1.52e-13,9;CL:0002419,1.52e-13,9;CL:0000790,1.52e-13,9;CL:0000838,1.39e-12,12;CL:0000542,1.70e-11,13;CL:0000051,1.70e-11,13;CL:0000624,2.01e-11,8;CL:0000084,7.42e-11,11;CL:0000827,7.42e-11,11;CL:0000988,8.73e-10,32;CL:0002032,8.73e-10,32;CL:0000037,8.73e-10,32;CL:0000837,8.73e-10,32;CL:0000738,1.98e-08,17;CL:0002087,1.98e-08,17;CL:0002320,2.43e-08,46;CL:0000134,2.43e-08,46;CL:0002031,5.99e-08,25;CL:0000893,4.07e-07,6;CL:0002489,4.07e-07,6;CL:0000898,4.07e-07,6;CL:0000809,4.07e-07,6;CL:0000810,4.07e-07,6;CL:0000895,4.07e-07,6;CL:0000808,4.07e-07,6;CL:0000894,4.07e-07,6;CL:0000806,4.07e-07,6;CL:0000807,4.07e-07,6;CL:0000805,4.07e-07,6;CL:0002425,4.07e-07,6;CL:0002436,4.07e-07,6;CL:0002427,4.07e-07,6;CL:0002428,4.07e-07,6;CL:0002429,4.07e-07,6;CL:0002433,4.07e-07,6;CL:0002431,4.07e-07,6;CL:0002432,4.07e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.12e-07!23;UBERON:0000974!4.12e-07!23;UBERON:0004807!4.12e-07!23;UBERON:0005058!4.12e-07!23;UBERON:0003351!4.12e-07!23;UBERON:0009113!4.12e-07!23;UBERON:0003295!4.12e-07!23;UBERON:0009722!4.12e-07!23;UBERON:0005562!4.12e-07!23;UBERON:0007690!4.12e-07!23;UBERON:0000065!6.14e-07!41;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.89e-12,23;UBERON:0000974,4.89e-12,23;UBERON:0004807,4.89e-12,23;UBERON:0005058,4.89e-12,23;UBERON:0003351,4.89e-12,23;UBERON:0009113,4.89e-12,23;UBERON:0003295,4.89e-12,23;UBERON:0009722,4.89e-12,23;UBERON:0005562,4.89e-12,23;UBERON:0007690,4.89e-12,23;UBERON:0006562,2.00e-11,24;UBERON:0003408,2.00e-11,24;UBERON:0001557,2.00e-11,24;UBERON:0001042,2.00e-11,24;UBERON:0008814,2.00e-11,24;UBERON:0009145,2.00e-11,24;UBERON:0000072,7.22e-10,27;UBERON:0004177,5.20e-09,29;UBERON:0005057,5.20e-09,29;UBERON:0000077,1.66e-08,35;UBERON:0003929,1.71e-08,55;UBERON:0000490,1.73e-08,66;UBERON:0002384,2.43e-08,46;UBERON:0002390,4.83e-07,45;UBERON:0003061,4.83e-07,45;UBERON:0005911,7.66e-07,69;UBERON:0007811,8.99e-07,36|phase1_expression=0.160148847104794,0,0.909998478779072,3.32710632437513,3.00537437967808,0.16787927191189,0.467225281191051,9.03863264091034,4.36445038670167,2.57470978954193,0.34243593645101,0.638177271962691,9.92964233600993,5.42006494997784,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0.84877930359606,0.510259740906419,0.297872853602656,0,0.159992422793407,0,0.57423196411502,0,0,0,0,0,1.27006134691926,1.23012957516914,0,1.73310971850765,0.498703936075477,2.85837098767317,1.67412652294763,3.1253413780952,0.523523743973798,6.47054636834116,4.78131839470912,2.42755176515577,0.503587271902309,0.304130793658544,0.367093504323363,0,0.436050312760893,0,0.388859798148567,0.279972843250725,0,1.8456086666351,7.25362142011344,3.6970317905671,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,1.97773272513395,0,0.898800331555214,0,0.103689612308478,0,0,0.856952953211411,0,0.244981598429908,0.191690942036473,0.919218786610021,1.10115880999389,0.127687338085188,0.46081959976873,0.659431438650969,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0.151143120213571,6.08715426273523,0,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,2.54805239706646,0,0,0.506719730950197,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.599075622529601,1.19980546198682,1.14363204365758,0.149790639404823,1.37250180845588,0.125654352112864,0,0.255715457330331,0.62336413367868,0.486723789203273,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0.689706313300419,0.360124259610698,0.150704817835715,0.680364991513279,0.512454881139399,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0,0,2.31613116403244,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.324275238183423,0.584799949701329,0.658650345873152,0.268412837520744,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0.380451252225118,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.758671603812327,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.482354319504834,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.369506380333209,0.1894914117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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=855 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:5334307..5334329,- | |||
|id=chr18:5334307..5334329,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.52e-13,9;CL:0000789,1.52e-13,9;CL:0002420,1.52e-13,9;CL:0002419,1.52e-13,9;CL:0000790,1.52e-13,9;CL:0000838,1.39e-12,12;CL:0000542,1.70e-11,13;CL:0000051,1.70e-11,13;CL:0000624,2.01e-11,8;CL:0000084,7.42e-11,11;CL:0000827,7.42e-11,11;CL:0000988,8.73e-10,32;CL:0002032,8.73e-10,32;CL:0000037,8.73e-10,32;CL:0000837,8.73e-10,32;CL:0000738,1.98e-08,17;CL:0002087,1.98e-08,17;CL:0002320,2.43e-08,46;CL:0000134,2.43e-08,46;CL:0002031,5.99e-08,25;CL:0000893,4.07e-07,6;CL:0002489,4.07e-07,6;CL:0000898,4.07e-07,6;CL:0000809,4.07e-07,6;CL:0000810,4.07e-07,6;CL:0000895,4.07e-07,6;CL:0000808,4.07e-07,6;CL:0000894,4.07e-07,6;CL:0000806,4.07e-07,6;CL:0000807,4.07e-07,6;CL:0000805,4.07e-07,6;CL:0002425,4.07e-07,6;CL:0002436,4.07e-07,6;CL:0002427,4.07e-07,6;CL:0002428,4.07e-07,6;CL:0002429,4.07e-07,6;CL:0002433,4.07e-07,6;CL:0002431,4.07e-07,6;CL:0002432,4.07e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.12e-07!23;UBERON:0000974!4.12e-07!23;UBERON:0004807!4.12e-07!23;UBERON:0005058!4.12e-07!23;UBERON:0003351!4.12e-07!23;UBERON:0009113!4.12e-07!23;UBERON:0003295!4.12e-07!23;UBERON:0009722!4.12e-07!23;UBERON:0005562!4.12e-07!23;UBERON:0007690!4.12e-07!23;UBERON:0000065!6.14e-07!41;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.89e-12,23;UBERON:0000974,4.89e-12,23;UBERON:0004807,4.89e-12,23;UBERON:0005058,4.89e-12,23;UBERON:0003351,4.89e-12,23;UBERON:0009113,4.89e-12,23;UBERON:0003295,4.89e-12,23;UBERON:0009722,4.89e-12,23;UBERON:0005562,4.89e-12,23;UBERON:0007690,4.89e-12,23;UBERON:0006562,2.00e-11,24;UBERON:0003408,2.00e-11,24;UBERON:0001557,2.00e-11,24;UBERON:0001042,2.00e-11,24;UBERON:0008814,2.00e-11,24;UBERON:0009145,2.00e-11,24;UBERON:0000072,7.22e-10,27;UBERON:0004177,5.20e-09,29;UBERON:0005057,5.20e-09,29;UBERON:0000077,1.66e-08,35;UBERON:0003929,1.71e-08,55;UBERON:0000490,1.73e-08,66;UBERON:0002384,2.43e-08,46;UBERON:0002390,4.83e-07,45;UBERON:0003061,4.83e-07,45;UBERON:0005911,7.66e-07,69;UBERON:0007811,8.99e-07,36 | |||
|phase1_expression=0.160148847104794,0,0.909998478779072,3.32710632437513,3.00537437967808,0.16787927191189,0.467225281191051,9.03863264091034,4.36445038670167,2.57470978954193,0.34243593645101,0.638177271962691,9.92964233600993,5.42006494997784,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0.84877930359606,0.510259740906419,0.297872853602656,0,0.159992422793407,0,0.57423196411502,0,0,0,0,0,1.27006134691926,1.23012957516914,0,1.73310971850765,0.498703936075477,2.85837098767317,1.67412652294763,3.1253413780952,0.523523743973798,6.47054636834116,4.78131839470912,2.42755176515577,0.503587271902309,0.304130793658544,0.367093504323363,0,0.436050312760893,0,0.388859798148567,0.279972843250725,0,1.8456086666351,7.25362142011344,3.6970317905671,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,1.97773272513395,0,0.898800331555214,0,0.103689612308478,0,0,0.856952953211411,0,0.244981598429908,0.191690942036473,0.919218786610021,1.10115880999389,0.127687338085188,0.46081959976873,0.659431438650969,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0.151143120213571,6.08715426273523,0,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,2.54805239706646,0,0,0.506719730950197,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.599075622529601,1.19980546198682,1.14363204365758,0.149790639404823,1.37250180845588,0.125654352112864,0,0.255715457330331,0.62336413367868,0.486723789203273,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0.689706313300419,0.360124259610698,0.150704817835715,0.680364991513279,0.512454881139399,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0,0,2.31613116403244,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.324275238183423,0.584799949701329,0.658650345873152,0.268412837520744,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0.380451252225118,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.758671603812327,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.482354319504834,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.952174563544055,0,0.315270288212382,0.44292937929755,0.159454768657487,1.14704320301017,0.863424909329478,0.867894351489069,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,1.92792789853084,0.425820255624806,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,0,0.646793418913773,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0.849892149969277,1.95932033253121,2.21119958087078,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,1.58005560314089,0,0.102710957164827,0.51968329191118,0.716106782669926,1.39076948346885,0.961563596159751,1.62458479892035,1.9183625490148,0.838274873204998,1.41156659191577,1.07203668813728,1.92423683280659,0.935015217452552,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,1.22769312950907,0.309873682371932,0.578719832943424,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr18:5334307..5334329,- | |||
}} |
Revision as of 16:20, 13 September 2013
Short description: | p@chr18:5334307..5334329, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:5334307..5334329, - |
Coexpression cluster: | MCL_coexpression_mm9:855 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.89e-12 | 23 |
neck | 4.89e-12 | 23 |
respiratory system epithelium | 4.89e-12 | 23 |
hemolymphoid system gland | 4.89e-12 | 23 |
pharyngeal epithelium | 4.89e-12 | 23 |
thymic region | 4.89e-12 | 23 |
pharyngeal gland | 4.89e-12 | 23 |
entire pharyngeal arch endoderm | 4.89e-12 | 23 |
thymus primordium | 4.89e-12 | 23 |
early pharyngeal endoderm | 4.89e-12 | 23 |
pharynx | 2.00e-11 | 24 |
gland of gut | 2.00e-11 | 24 |
upper respiratory tract | 2.00e-11 | 24 |
chordate pharynx | 2.00e-11 | 24 |
pharyngeal arch system | 2.00e-11 | 24 |
pharyngeal region of foregut | 2.00e-11 | 24 |
segment of respiratory tract | 7.22e-10 | 27 |
hemopoietic organ | 5.20e-09 | 29 |
immune organ | 5.20e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 1.66e-08 | 35 |
gut epithelium | 1.71e-08 | 55 |
unilaminar epithelium | 1.73e-08 | 66 |
connective tissue | 2.43e-08 | 46 |
hematopoietic system | 4.83e-07 | 45 |
blood island | 4.83e-07 | 45 |
endo-epithelium | 7.66e-07 | 69 |
craniocervical region | 8.99e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.