FFCP PHASE1:Mm9::chr15:76356879..76356882,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=39|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:76356879..76356882,+|id=chr15:76356879..76356882,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.32e-21!71;UBERON:0003075!3.32e-21!71;UBERON:0007284!3.32e-21!71;UBERON:0000033!5.34e-17!63;UBERON:0004121!2.14e-15!102;UBERON:0000924!2.14e-15!102;UBERON:0006601!2.14e-15!102;UBERON:0003056!4.67e-15!49;UBERON:0002616!2.61e-14!49;UBERON:0001017!2.78e-14!73;UBERON:0005743!2.78e-14!73;UBERON:0000955!1.01e-13!50;UBERON:0006238!1.01e-13!50;UBERON:0001049!1.73e-13!52;UBERON:0005068!1.73e-13!52;UBERON:0006241!1.73e-13!52;UBERON:0007135!1.73e-13!52;UBERON:0000073!2.15e-13!75;UBERON:0001016!2.15e-13!75;UBERON:0003080!1.29e-10!40;UBERON:0007811!1.93e-10!86;UBERON:0000153!3.48e-10!94;UBERON:0002780!6.09e-10!39;UBERON:0001890!6.09e-10!39;UBERON:0006240!6.09e-10!39;UBERON:0002020!1.54e-07!34;UBERON:0002791!4.28e-07!29;UBERON:0003528!4.28e-07!29;UBERON:0001893!4.28e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.60e-13,64;UBERON:0003075,1.60e-13,64;UBERON:0007284,1.60e-13,64;UBERON:0000073,4.01e-12,54;UBERON:0010371,1.50e-11,73;UBERON:0003056,2.80e-11,49;UBERON:0001049,9.70e-11,52;UBERON:0005068,9.70e-11,52;UBERON:0006241,9.70e-11,52;UBERON:0007135,9.70e-11,52;UBERON:0002616,2.27e-10,46;UBERON:0000955,4.11e-10,47;UBERON:0006238,4.11e-10,47;UBERON:0004121,1.32e-09,95;UBERON:0000924,1.32e-09,95;UBERON:0006601,1.32e-09,95;UBERON:0010314,1.20e-08,92;UBERON:0001017,2.10e-08,73;UBERON:0001016,4.03e-08,75;UBERON:0003080,6.39e-08,40;UBERON:0002021,2.46e-07,10;UBERON:0000411,2.46e-07,10;UBERON:0001950,2.46e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.734187008646726,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0,0,0,0.766763768145891,2.75765635983006,1.10115880999389,0.893811366596314,0.153606533256243,0.395658863190582,0.548925861614458,0,0,0,1.5279824777681,1.17851434189467,0.427115042397309,0.372798891650601,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0.484875253135222,0,2.92780797011547,4.1889341362691,0.255457055208591,0,0,0,1.49790639404823,0.457500602818626,0.753926112677186,0.695297280769106,1.02286182932132,0.83115217823824,1.62241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.884474488967262,1.0249097622788,1.21812241927647,1.55222022443409,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.841159794256509,0.308713837137853,0,0,0,0.464473343720877,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0.776152102696527,0.643011105094777,0.177340233642274,0,0.822745103010605,0,0,0,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0.388902376688095,0.129159823477731,0,0,0,0,0.241584120826006,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.89038500578056,0,0.755393897389701,2.02506750069542,0.45032120322422,0,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,1.21553358534147,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr15:76356879..76356882,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:76356879..76356882,+ | |||
|id=chr15:76356879..76356882,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.32e-21!71;UBERON:0003075!3.32e-21!71;UBERON:0007284!3.32e-21!71;UBERON:0000033!5.34e-17!63;UBERON:0004121!2.14e-15!102;UBERON:0000924!2.14e-15!102;UBERON:0006601!2.14e-15!102;UBERON:0003056!4.67e-15!49;UBERON:0002616!2.61e-14!49;UBERON:0001017!2.78e-14!73;UBERON:0005743!2.78e-14!73;UBERON:0000955!1.01e-13!50;UBERON:0006238!1.01e-13!50;UBERON:0001049!1.73e-13!52;UBERON:0005068!1.73e-13!52;UBERON:0006241!1.73e-13!52;UBERON:0007135!1.73e-13!52;UBERON:0000073!2.15e-13!75;UBERON:0001016!2.15e-13!75;UBERON:0003080!1.29e-10!40;UBERON:0007811!1.93e-10!86;UBERON:0000153!3.48e-10!94;UBERON:0002780!6.09e-10!39;UBERON:0001890!6.09e-10!39;UBERON:0006240!6.09e-10!39;UBERON:0002020!1.54e-07!34;UBERON:0002791!4.28e-07!29;UBERON:0003528!4.28e-07!29;UBERON:0001893!4.28e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.60e-13,64;UBERON:0003075,1.60e-13,64;UBERON:0007284,1.60e-13,64;UBERON:0000073,4.01e-12,54;UBERON:0010371,1.50e-11,73;UBERON:0003056,2.80e-11,49;UBERON:0001049,9.70e-11,52;UBERON:0005068,9.70e-11,52;UBERON:0006241,9.70e-11,52;UBERON:0007135,9.70e-11,52;UBERON:0002616,2.27e-10,46;UBERON:0000955,4.11e-10,47;UBERON:0006238,4.11e-10,47;UBERON:0004121,1.32e-09,95;UBERON:0000924,1.32e-09,95;UBERON:0006601,1.32e-09,95;UBERON:0010314,1.20e-08,92;UBERON:0001017,2.10e-08,73;UBERON:0001016,4.03e-08,75;UBERON:0003080,6.39e-08,40;UBERON:0002021,2.46e-07,10;UBERON:0000411,2.46e-07,10;UBERON:0001950,2.46e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.734187008646726,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0,0,0,0.766763768145891,2.75765635983006,1.10115880999389,0.893811366596314,0.153606533256243,0.395658863190582,0.548925861614458,0,0,0,1.5279824777681,1.17851434189467,0.427115042397309,0.372798891650601,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0.484875253135222,0,2.92780797011547,4.1889341362691,0.255457055208591,0,0,0,1.49790639404823,0.457500602818626,0.753926112677186,0.695297280769106,1.02286182932132,0.83115217823824,1.62241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.884474488967262,1.0249097622788,1.21812241927647,1.55222022443409,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.841159794256509,0.308713837137853,0,0,0,0.464473343720877,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0.776152102696527,0.643011105094777,0.177340233642274,0,0.822745103010605,0,0,0,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0.388902376688095,0.129159823477731,0,0,0,0,0.241584120826006,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.89038500578056,0,0.755393897389701,2.02506750069542,0.45032120322422,0,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,1.21553358534147,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:76356879..76356882,+ | |||
}} |
Revision as of 10:59, 13 September 2013
Short description: | p@chr15:76356879..76356882, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:76356879..76356882, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.60e-13 | 64 |
neural plate | 1.60e-13 | 64 |
presumptive neural plate | 1.60e-13 | 64 |
regional part of nervous system | 4.01e-12 | 54 |
ecto-epithelium | 1.50e-11 | 73 |
pre-chordal neural plate | 2.80e-11 | 49 |
neural tube | 9.70e-11 | 52 |
neural rod | 9.70e-11 | 52 |
future spinal cord | 9.70e-11 | 52 |
neural keel | 9.70e-11 | 52 |
regional part of brain | 2.27e-10 | 46 |
brain | 4.11e-10 | 47 |
future brain | 4.11e-10 | 47 |
ectoderm-derived structure | 1.32e-09 | 95 |
ectoderm | 1.32e-09 | 95 |
presumptive ectoderm | 1.32e-09 | 95 |
structure with developmental contribution from neural crest | 1.20e-08 | 92 |
central nervous system | 2.10e-08 | 73 |
nervous system | 4.03e-08 | 75 |
anterior neural tube | 6.39e-08 | 40 |
occipital lobe | 2.46e-07 | 10 |
visual cortex | 2.46e-07 | 10 |
neocortex | 2.46e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.