Personal tools

FFCP PHASE1:Mm9::chr8:87237692..87237703,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=18032|HGNC=|MCL_coexpression_id=2484|UniProt=|association_with_transcript=263bp_to_ENSMUST00000132236_5end|description=CAGE_peak_12_at_Nfix_5end|id=chr8:87237692..87237703,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!2.58e-11!122;UBERON:0000025!3.09e-11!114;UBERON:0000956!1.81e-09!21;UBERON:0001869!1.81e-09!21;UBERON:0000203!1.81e-09!21;UBERON:0002020!4.92e-08!34;UBERON:0002619!1.40e-07!17;UBERON:0001049!1.50e-07!52;UBERON:0005068!1.50e-07!52;UBERON:0006241!1.50e-07!52;UBERON:0007135!1.50e-07!52;UBERON:0002791!3.15e-07!29;UBERON:0003528!3.15e-07!29;UBERON:0001893!3.15e-07!29;UBERON:0002021!4.19e-07!10;UBERON:0000411!4.19e-07!10;UBERON:0001950!4.19e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.97e-15,21;UBERON:0001869,2.97e-15,21;UBERON:0000203,2.97e-15,21;UBERON:0002021,8.09e-13,10;UBERON:0000411,8.09e-13,10;UBERON:0001950,8.09e-13,10;UBERON:0002619,4.42e-12,17;UBERON:0003528,3.75e-11,29;UBERON:0002791,3.75e-11,29;UBERON:0001893,3.75e-11,29;UBERON:0002020,4.18e-10,34;UBERON:0001049,1.70e-08,52;UBERON:0005068,1.70e-08,52;UBERON:0006241,1.70e-08,52;UBERON:0007135,1.70e-08,52;UBERON:0002616,2.61e-08,46;UBERON:0000955,5.00e-08,47;UBERON:0006238,5.00e-08,47;UBERON:0002346,1.64e-07,64;UBERON:0003075,1.64e-07,64;UBERON:0007284,1.64e-07,64;UBERON:0010371,2.40e-07,73;UBERON:0002780,3.35e-07,39;UBERON:0001890,3.35e-07,39;UBERON:0006240,3.35e-07,39;UBERON:0000073,3.47e-07,54;UBERON:0004121,5.72e-07,95;UBERON:0000924,5.72e-07,95;UBERON:0006601,5.72e-07,95;UBERON:0003080,6.39e-07,40;UBERON:0001017,8.55e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.11514624341466,1.65192076945513,0,1.30815093828268,0.659058548203415,1.94429899074283,1.53985063787899,2.87505128729943,0,0,0,1.02903774414379,0.85960031981627,0,0.404632921719196,0.528990979272033,0.633831403506179,0,1.77858959222228,0,0,0,0.898800331555214,3.45796474789399,1.97010263386108,3.78016627328734,2.73422449756797,0.571301968807607,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.766124028511126,0.153606533256243,0.131886287730194,0.365950574409639,0,0,1.12552522006336,0.15279824777681,1.47314292736834,0.854230084794618,0.745597783301202,0,0.0755715601067855,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,1.1930122580464,0.259786004602869,0.70667914902068,0,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.289198713839823,0,1.61766849947409,2.65009822152472,1.93950101254089,0,2.34224637609238,1.67557365450764,0.255457055208591,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.521472960576829,1.02286182932132,0.41557608911912,0.324482526135515,0.916554274652847,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0,0.360124259610698,0.452114453507145,0.884474488967262,1.2811372028485,0.374806898238915,2.32833033665114,0,0.567318240503458,0.351902248327898,0.876782929710299,2.22437799380478,1.74126083261083,1.23469281844766,0.398068533636986,0,0.257347907114715,0,0,0,0.540186184383045,0.710234206755631,0.196764231747404,0.462801338662135,0.930135779001631,0.268273401399619,0.350296027101508,0.329119699826961,1.64167464079095,0.729619285912702,0.584799949701329,0.878200461164203,0.402619256281115,1.26173969138476,7.40913209130848,0,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0,0.380451252225118,0,0,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0.114248512609729,0,0.610953983535943,1.16371492300575,0.420814919341911,0.379419222745544,0.590440591918409,0.156998727841375,0,0.889357881261447,0.166845105716094,0,0.449724224769707,0.405720242777006,0,0.25462585178142,0,0,0.823684239564244,4.31304619582064,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,0.923765950833023,0,0.977789858652155,0.848725428875941,0.469380496577004,0.335012514883631,1.42826184531608,0.390267295715598,0.630540576424764,1.55025282754142,1.2756381492599,1.14704320301017,0.863424909329478,0.723245292907558,0,0,1.96705709207614,0.551873492609465,0.642202359951168,0.35163505977661,0.819674726883377,2.01976741763498,0.315508219416257,0,0.646270193198397,0,0,0,0,0,0,0,0.851640511249612,1.24645922567079,0.977321756121456,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.822745103010605,0.304464949114599,0.23467170806371,0,0.441056796109924,0.16488625294148,0.322928853391811,1.20625849856312,0.835606408021955,0.492422699235184,0.874442509889552,1.11255181206306,0.512612642393558,0.206386867963223,0.370389054739423,0,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.972048067396211,0.627264888043406,0.655087691238533,1.61837215661785,0.495920734352016,0,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,1.68956125490778,0.704143431874524,0.651021924219751,0.419437377702843,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,3.40095575422817,0,0,0,1.35232715822533,1.31377732815827,1.28206136987086,0.643105137237198,0.501572104035363,2.82375921308533,3.22227665555024,3.43737308063638,2.23409137046794,0.685082519770642,1.5107877947794,2.02506750069542,3.15224842256954,2.71885445390523,1.55328093525546,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,0.419226325255965,0,0,0,0.320919209591815,0,0.50695859978048,0,0.37456602987953,0.320125762024346,0.229741875822453,0,0.811190281613988,0.192909220463705,0,0.441596760403192,1.71434626192708,0.532427418478012,1.1921809497366,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0.789209134313529,0.407412341537585,0.561142271657738,0.830445126869219,0.394017929502254,0,0.154936841185966,0.192906610981141,0.749431733813838,0.935726433781634,1.50409737833809,2.86932498103265,0.661774257358546,0.695603506861264|short_description=p12@Nfix}}
|EntrezGene=18032
|HGNC=
|MCL_coexpression_id=2484
|UniProt=
|association_with_transcript=263bp_to_ENSMUST00000132236_5end
|description=CAGE_peak_12_at_Nfix_5end
|id=chr8:87237692..87237703,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!2.58e-11!122;UBERON:0000025!3.09e-11!114;UBERON:0000956!1.81e-09!21;UBERON:0001869!1.81e-09!21;UBERON:0000203!1.81e-09!21;UBERON:0002020!4.92e-08!34;UBERON:0002619!1.40e-07!17;UBERON:0001049!1.50e-07!52;UBERON:0005068!1.50e-07!52;UBERON:0006241!1.50e-07!52;UBERON:0007135!1.50e-07!52;UBERON:0002791!3.15e-07!29;UBERON:0003528!3.15e-07!29;UBERON:0001893!3.15e-07!29;UBERON:0002021!4.19e-07!10;UBERON:0000411!4.19e-07!10;UBERON:0001950!4.19e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.97e-15,21;UBERON:0001869,2.97e-15,21;UBERON:0000203,2.97e-15,21;UBERON:0002021,8.09e-13,10;UBERON:0000411,8.09e-13,10;UBERON:0001950,8.09e-13,10;UBERON:0002619,4.42e-12,17;UBERON:0003528,3.75e-11,29;UBERON:0002791,3.75e-11,29;UBERON:0001893,3.75e-11,29;UBERON:0002020,4.18e-10,34;UBERON:0001049,1.70e-08,52;UBERON:0005068,1.70e-08,52;UBERON:0006241,1.70e-08,52;UBERON:0007135,1.70e-08,52;UBERON:0002616,2.61e-08,46;UBERON:0000955,5.00e-08,47;UBERON:0006238,5.00e-08,47;UBERON:0002346,1.64e-07,64;UBERON:0003075,1.64e-07,64;UBERON:0007284,1.64e-07,64;UBERON:0010371,2.40e-07,73;UBERON:0002780,3.35e-07,39;UBERON:0001890,3.35e-07,39;UBERON:0006240,3.35e-07,39;UBERON:0000073,3.47e-07,54;UBERON:0004121,5.72e-07,95;UBERON:0000924,5.72e-07,95;UBERON:0006601,5.72e-07,95;UBERON:0003080,6.39e-07,40;UBERON:0001017,8.55e-07,73
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.11514624341466,1.65192076945513,0,1.30815093828268,0.659058548203415,1.94429899074283,1.53985063787899,2.87505128729943,0,0,0,1.02903774414379,0.85960031981627,0,0.404632921719196,0.528990979272033,0.633831403506179,0,1.77858959222228,0,0,0,0.898800331555214,3.45796474789399,1.97010263386108,3.78016627328734,2.73422449756797,0.571301968807607,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.766124028511126,0.153606533256243,0.131886287730194,0.365950574409639,0,0,1.12552522006336,0.15279824777681,1.47314292736834,0.854230084794618,0.745597783301202,0,0.0755715601067855,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,1.1930122580464,0.259786004602869,0.70667914902068,0,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.289198713839823,0,1.61766849947409,2.65009822152472,1.93950101254089,0,2.34224637609238,1.67557365450764,0.255457055208591,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.521472960576829,1.02286182932132,0.41557608911912,0.324482526135515,0.916554274652847,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0,0.360124259610698,0.452114453507145,0.884474488967262,1.2811372028485,0.374806898238915,2.32833033665114,0,0.567318240503458,0.351902248327898,0.876782929710299,2.22437799380478,1.74126083261083,1.23469281844766,0.398068533636986,0,0.257347907114715,0,0,0,0.540186184383045,0.710234206755631,0.196764231747404,0.462801338662135,0.930135779001631,0.268273401399619,0.350296027101508,0.329119699826961,1.64167464079095,0.729619285912702,0.584799949701329,0.878200461164203,0.402619256281115,1.26173969138476,7.40913209130848,0,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0,0.380451252225118,0,0,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0.114248512609729,0,0.610953983535943,1.16371492300575,0.420814919341911,0.379419222745544,0.590440591918409,0.156998727841375,0,0.889357881261447,0.166845105716094,0,0.449724224769707,0.405720242777006,0,0.25462585178142,0,0,0.823684239564244,4.31304619582064,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,0.923765950833023,0,0.977789858652155,0.848725428875941,0.469380496577004,0.335012514883631,1.42826184531608,0.390267295715598,0.630540576424764,1.55025282754142,1.2756381492599,1.14704320301017,0.863424909329478,0.723245292907558,0,0,1.96705709207614,0.551873492609465,0.642202359951168,0.35163505977661,0.819674726883377,2.01976741763498,0.315508219416257,0,0.646270193198397,0,0,0,0,0,0,0,0.851640511249612,1.24645922567079,0.977321756121456,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.822745103010605,0.304464949114599,0.23467170806371,0,0.441056796109924,0.16488625294148,0.322928853391811,1.20625849856312,0.835606408021955,0.492422699235184,0.874442509889552,1.11255181206306,0.512612642393558,0.206386867963223,0.370389054739423,0,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.972048067396211,0.627264888043406,0.655087691238533,1.61837215661785,0.495920734352016,0,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,1.68956125490778,0.704143431874524,0.651021924219751,0.419437377702843,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,3.40095575422817,0,0,0,1.35232715822533,1.31377732815827,1.28206136987086,0.643105137237198,0.501572104035363,2.82375921308533,3.22227665555024,3.43737308063638,2.23409137046794,0.685082519770642,1.5107877947794,2.02506750069542,3.15224842256954,2.71885445390523,1.55328093525546,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,0.419226325255965,0,0,0,0.320919209591815,0,0.50695859978048,0,0.37456602987953,0.320125762024346,0.229741875822453,0,0.811190281613988,0.192909220463705,0,0.441596760403192,1.71434626192708,0.532427418478012,1.1921809497366,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0.789209134313529,0.407412341537585,0.561142271657738,0.830445126869219,0.394017929502254,0,0.154936841185966,0.192906610981141,0.749431733813838,0.935726433781634,1.50409737833809,2.86932498103265,0.661774257358546,0.695603506861264
|short_description=p12@Nfix
}}

Revision as of 16:17, 14 September 2013

Short description:p12@Nfix
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Nfix_5end
Coexpression cluster:MCL_coexpression_mm9:2484
Association with transcript: 263bp_to_ENSMUST00000132236_5end
EntrezGene:Nfix
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Nfix

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cerebral cortex2.97e-1521
cerebral hemisphere2.97e-1521
pallium2.97e-1521
occipital lobe8.09e-1310
visual cortex8.09e-1310
neocortex8.09e-1310
regional part of cerebral cortex4.42e-1217
brain grey matter3.75e-1129
regional part of telencephalon3.75e-1129
telencephalon3.75e-1129
gray matter4.18e-1034
neural tube1.70e-0852
neural rod1.70e-0852
future spinal cord1.70e-0852
neural keel1.70e-0852
regional part of brain2.61e-0846
brain5.00e-0847
future brain5.00e-0847
neurectoderm1.64e-0764
neural plate1.64e-0764
presumptive neural plate1.64e-0764
ecto-epithelium2.40e-0773
regional part of forebrain3.35e-0739
forebrain3.35e-0739
future forebrain3.35e-0739
regional part of nervous system3.47e-0754
ectoderm-derived structure5.72e-0795
ectoderm5.72e-0795
presumptive ectoderm5.72e-0795
anterior neural tube6.39e-0740
central nervous system8.55e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:87237692..87237703,-&oldid=3056371"