FFCP PHASE1:Mm9::chr10:39451724..39451735,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|UniProt=|association_with_transcript=37bp_to_ENSMUST00000153113,uc007ewb.1_5end|description=CAGE_peak_2_at_ENSMUST00000153113_5end,CAGE_peak_2_at_uc007ewb.1_5end|id=chr10:39451724..39451735,-|ontology_enrichment_celltype=CL:0000117!1.32e-07!23;CL:0000337!1.32e-07!23;CL:0000393!3.98e-07!39;CL:0000211!3.98e-07!39;CL:0000540!4.20e-07!33;CL:0000047!4.20e-07!33;CL:0000031!4.20e-07!33;CL:0000404!4.20e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-13,23;CL:0000337,9.45e-13,23;CL:0000540,1.18e-09,33;CL:0000047,1.18e-09,33;CL:0000031,1.18e-09,33;CL:0000404,1.18e-09,33;CL:0002319,5.28e-08,43;CL:0002612,6.51e-08,3;CL:0000221,9.39e-08,44;CL:0000133,9.39e-08,44;CL:0000393,9.60e-08,39;CL:0000211,9.60e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.55e-11!73;UBERON:0005743!5.55e-11!73;UBERON:0000073!3.20e-10!75;UBERON:0001016!3.20e-10!75;UBERON:0001049!3.17e-09!52;UBERON:0005068!3.17e-09!52;UBERON:0006241!3.17e-09!52;UBERON:0007135!3.17e-09!52;UBERON:0004121!7.46e-09!102;UBERON:0000924!7.46e-09!102;UBERON:0006601!7.46e-09!102;UBERON:0002020!4.03e-08!34;UBERON:0000033!5.78e-08!63;UBERON:0002346!8.99e-08!71;UBERON:0003075!8.99e-08!71;UBERON:0007284!8.99e-08!71;UBERON:0000955!2.93e-07!50;UBERON:0006238!2.93e-07!50;UBERON:0002616!6.75e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.10e-14,6;UBERON:0005174,2.10e-14,6;UBERON:0001137,2.10e-14,6;UBERON:0002020,3.41e-13,34;UBERON:0001049,1.10e-12,52;UBERON:0005068,1.10e-12,52;UBERON:0006241,1.10e-12,52;UBERON:0007135,1.10e-12,52;UBERON:0001948,1.37e-12,5;UBERON:0002315,1.37e-12,5;UBERON:0001017,1.59e-12,73;UBERON:0000073,3.27e-12,54;UBERON:0001016,4.77e-12,75;UBERON:0003076,6.85e-12,12;UBERON:0003057,6.85e-12,12;UBERON:0002346,8.95e-11,64;UBERON:0003075,8.95e-11,64;UBERON:0007284,8.95e-11,64;UBERON:0004121,1.94e-09,95;UBERON:0000924,1.94e-09,95;UBERON:0006601,1.94e-09,95;UBERON:0010371,7.00e-09,73;UBERON:0002257,6.51e-08,3|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.16787927191189,0,0,0.563154888606667,0,0,0.159544317990673,0,0.0874204024189974,0.666219523631325,0.202475267389826,0,0.157731082679119,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0.755380907853464,0.811015449756117,0.917733760808408,0,0.436050312760893,0.659058548203415,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.76272340924412,1.08004750665353,0.630974884054146,3.14216082844184,1.76694832761291,0.857435594504678,0.670918297127655,0,2.20231761998777,0.893811366596314,0.153606533256243,1.18697658957174,1.09785172322892,0.52091337055676,0.837548997004143,2.25105044012672,0.45839474333043,1.47314292736834,1.70846016958924,1.3047961207771,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.561777680527007,0.681721290312231,0.519572009205738,0.35333957451034,0.422530259330042,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.470354828542819,0.125666591329675,0,0.289198713839823,0,0.808834249737046,0.662524555381181,0,0,0.292780797011547,1.46612694769419,0.255457055208591,0.239630249011841,0,0.127070227073065,0.898743836428936,0.915001205637253,1.88481528169297,0.347648640384553,0.767146371990992,0.83115217823824,0.811206315338788,0,0.248813941220186,0,0.841767423545896,0.260240885925407,0,0.360124259610698,0.60281927134286,0.680364991513279,0.512454881139399,0.655912071918102,1.81092359517311,0.431135985865684,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0.398068533636986,0,0.257347907114715,0,0,0.469052119962192,0,0,0.983821158737019,0.308534225774757,0,0.268273401399619,0.467061369468678,0.987359099480883,0.164167464079095,0.243206428637567,0.292399974850665,0,0,1.89260953707715,2.16099685996497,0,0.264450566663544,1.06644125267617,0.232236671860439,0.257734922644187,0.605050573870028,0.22237804384487,0.570676878337677,0,0.164698954724011,0.502670417600539,0.795825888164603,0.779856348476481,0,0.216138049874694,0.199141273254367,0.569003702859245,0.571242563048644,0,0.814605311381257,0.581857461502877,0.771494018793504,0.316182685621286,0,0,0.246794327843601,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0.744281895337007,0,0.252578877947112,0.538192240565737,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.848725428875941,0.469380496577004,0.167506257441816,0.952174563544055,0.585400943573396,1.26108115284953,0.221464689648775,0.956728611944923,0.983179888294428,0.345369963731791,0.578596234326046,0,0,0,0.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| ||
|EntrezGene= | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENSMUST00000153113,uc007ewb.1_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000153113_5end,CAGE_peak_2_at_uc007ewb.1_5end | |||
|id=chr10:39451724..39451735,- | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-07!23;CL:0000337!1.32e-07!23;CL:0000393!3.98e-07!39;CL:0000211!3.98e-07!39;CL:0000540!4.20e-07!33;CL:0000047!4.20e-07!33;CL:0000031!4.20e-07!33;CL:0000404!4.20e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-13,23;CL:0000337,9.45e-13,23;CL:0000540,1.18e-09,33;CL:0000047,1.18e-09,33;CL:0000031,1.18e-09,33;CL:0000404,1.18e-09,33;CL:0002319,5.28e-08,43;CL:0002612,6.51e-08,3;CL:0000221,9.39e-08,44;CL:0000133,9.39e-08,44;CL:0000393,9.60e-08,39;CL:0000211,9.60e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.55e-11!73;UBERON:0005743!5.55e-11!73;UBERON:0000073!3.20e-10!75;UBERON:0001016!3.20e-10!75;UBERON:0001049!3.17e-09!52;UBERON:0005068!3.17e-09!52;UBERON:0006241!3.17e-09!52;UBERON:0007135!3.17e-09!52;UBERON:0004121!7.46e-09!102;UBERON:0000924!7.46e-09!102;UBERON:0006601!7.46e-09!102;UBERON:0002020!4.03e-08!34;UBERON:0000033!5.78e-08!63;UBERON:0002346!8.99e-08!71;UBERON:0003075!8.99e-08!71;UBERON:0007284!8.99e-08!71;UBERON:0000955!2.93e-07!50;UBERON:0006238!2.93e-07!50;UBERON:0002616!6.75e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.10e-14,6;UBERON:0005174,2.10e-14,6;UBERON:0001137,2.10e-14,6;UBERON:0002020,3.41e-13,34;UBERON:0001049,1.10e-12,52;UBERON:0005068,1.10e-12,52;UBERON:0006241,1.10e-12,52;UBERON:0007135,1.10e-12,52;UBERON:0001948,1.37e-12,5;UBERON:0002315,1.37e-12,5;UBERON:0001017,1.59e-12,73;UBERON:0000073,3.27e-12,54;UBERON:0001016,4.77e-12,75;UBERON:0003076,6.85e-12,12;UBERON:0003057,6.85e-12,12;UBERON:0002346,8.95e-11,64;UBERON:0003075,8.95e-11,64;UBERON:0007284,8.95e-11,64;UBERON:0004121,1.94e-09,95;UBERON:0000924,1.94e-09,95;UBERON:0006601,1.94e-09,95;UBERON:0010371,7.00e-09,73;UBERON:0002257,6.51e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.16787927191189,0,0,0.563154888606667,0,0,0.159544317990673,0,0.0874204024189974,0.666219523631325,0.202475267389826,0,0.157731082679119,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0.755380907853464,0.811015449756117,0.917733760808408,0,0.436050312760893,0.659058548203415,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.76272340924412,1.08004750665353,0.630974884054146,3.14216082844184,1.76694832761291,0.857435594504678,0.670918297127655,0,2.20231761998777,0.893811366596314,0.153606533256243,1.18697658957174,1.09785172322892,0.52091337055676,0.837548997004143,2.25105044012672,0.45839474333043,1.47314292736834,1.70846016958924,1.3047961207771,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.561777680527007,0.681721290312231,0.519572009205738,0.35333957451034,0.422530259330042,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.470354828542819,0.125666591329675,0,0.289198713839823,0,0.808834249737046,0.662524555381181,0,0,0.292780797011547,1.46612694769419,0.255457055208591,0.239630249011841,0,0.127070227073065,0.898743836428936,0.915001205637253,1.88481528169297,0.347648640384553,0.767146371990992,0.83115217823824,0.811206315338788,0,0.248813941220186,0,0.841767423545896,0.260240885925407,0,0.360124259610698,0.60281927134286,0.680364991513279,0.512454881139399,0.655912071918102,1.81092359517311,0.431135985865684,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0.398068533636986,0,0.257347907114715,0,0,0.469052119962192,0,0,0.983821158737019,0.308534225774757,0,0.268273401399619,0.467061369468678,0.987359099480883,0.164167464079095,0.243206428637567,0.292399974850665,0,0,1.89260953707715,2.16099685996497,0,0.264450566663544,1.06644125267617,0.232236671860439,0.257734922644187,0.605050573870028,0.22237804384487,0.570676878337677,0,0.164698954724011,0.502670417600539,0.795825888164603,0.779856348476481,0,0.216138049874694,0.199141273254367,0.569003702859245,0.571242563048644,0,0.814605311381257,0.581857461502877,0.771494018793504,0.316182685621286,0,0,0.246794327843601,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0.744281895337007,0,0.252578877947112,0.538192240565737,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.848725428875941,0.469380496577004,0.167506257441816,0.952174563544055,0.585400943573396,1.26108115284953,0.221464689648775,0.956728611944923,0.983179888294428,0.345369963731791,0.578596234326046,0,0,0,0.551873492609465,0.80275294993896,1.28932855251423,0,1.26235463602186,0.94652465824877,0,0.646270193198397,1.43381278771531,0.668396022247182,0.566153061577665,0,0.876767573733936,0.395287777946524,0.963963949265421,0.141940085208269,0.35613120733451,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0.922305443831782,0,0,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.532020700926821,0.713475270408282,1.15184314421485,0.304464949114599,0,0.21183207086382,0,0.98931751764888,0.807322133479528,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,1.11255181206306,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0,0.339956859987711,0.559805809294632,0.138199973804424,0.954670618015114,0.474503990371703,0.203319467126849,0.540026704109006,0.627264888043406,0.436725127492355,0.674321731924103,0.41326727862668,0,0.648074866458964,0.621339313086926,6.76431526421028,0.299033092087958,0.330916980914195,0.583353565032143,0.645799117388655,0,0.704143431874524,0.651021924219751,0.943734099831398,2.65742532908607,5.76060012515731,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.381034033274999,0.403304740547362,0.292373642219257,0.481059208201647,0.233753804363138,0.906921534460845,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.549454872801795,0.428736758158132,0.501572104035363,0,0,2.29158205375759,0.68741272937475,0,0,0.675022500231806,0.900642406448441,0.906284817968409,2.5888015587591,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.919217542250071,1.11123363900808,0.618105171716683,0,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.640251524048693,0.918967503289812,0.952587382566147,0.347652977834566,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.436039249896986,0.5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| |||
|short_description=p2@ENSMUST00000153113,p2@uc007ewb.1 | |||
}} |
Revision as of 16:40, 12 September 2013
Short description: | p2@ENSMUST00000153113, p2@uc007ewb.1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000153113_5end, CAGE_peak_2_at_uc007ewb.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENSMUST00000153113, uc007ewb.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.45e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.45e-13 | 23 |
neuron | 1.18e-09 | 33 |
neuronal stem cell | 1.18e-09 | 33 |
neuroblast | 1.18e-09 | 33 |
electrically signaling cell | 1.18e-09 | 33 |
neural cell | 5.28e-08 | 43 |
neuron of the ventral spinal cord | 6.51e-08 | 3 |
ectodermal cell | 9.39e-08 | 44 |
neurectodermal cell | 9.39e-08 | 44 |
electrically responsive cell | 9.60e-08 | 39 |
electrically active cell | 9.60e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.10e-14 | 6 |
dorsal region element | 2.10e-14 | 6 |
dorsum | 2.10e-14 | 6 |
gray matter | 3.41e-13 | 34 |
neural tube | 1.10e-12 | 52 |
neural rod | 1.10e-12 | 52 |
future spinal cord | 1.10e-12 | 52 |
neural keel | 1.10e-12 | 52 |
regional part of spinal cord | 1.37e-12 | 5 |
gray matter of spinal cord | 1.37e-12 | 5 |
central nervous system | 1.59e-12 | 73 |
regional part of nervous system | 3.27e-12 | 54 |
nervous system | 4.77e-12 | 75 |
posterior neural tube | 6.85e-12 | 12 |
chordal neural plate | 6.85e-12 | 12 |
neurectoderm | 8.95e-11 | 64 |
neural plate | 8.95e-11 | 64 |
presumptive neural plate | 8.95e-11 | 64 |
ectoderm-derived structure | 1.94e-09 | 95 |
ectoderm | 1.94e-09 | 95 |
presumptive ectoderm | 1.94e-09 | 95 |
ecto-epithelium | 7.00e-09 | 73 |
ventral horn of spinal cord | 6.51e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.