FFCP PHASE1:Mm9::chr12:4925036..4925055,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=433|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:4925036..4925055,-|id=chr12:4925036..4925055,-|ontology_enrichment_celltype=CL:0000838!1.43e-09!12;CL:0000988!5.82e-09!32;CL:0002032!5.82e-09!32;CL:0000037!5.82e-09!32;CL:0000566!5.82e-09!32;CL:0000837!5.82e-09!32;CL:0000084!8.01e-09!11;CL:0000827!8.01e-09!11;CL:0002320!1.77e-08!46;CL:0000134!1.77e-08!46;CL:0000542!2.70e-08!13;CL:0000051!2.70e-08!13;CL:0000219!8.19e-08!54;CL:0000791!1.09e-07!9;CL:0000789!1.09e-07!9;CL:0002420!1.09e-07!9;CL:0002419!1.09e-07!9;CL:0000790!1.09e-07!9;CL:0000738!2.62e-07!17;CL:0002087!2.62e-07!17;CL:0000624!5.25e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,2.53e-30,32;CL:0002032,2.53e-30,32;CL:0000037,2.53e-30,32;CL:0000837,2.53e-30,32;CL:0002320,9.68e-28,46;CL:0000134,9.68e-28,46;CL:0000838,6.31e-26,12;CL:0000542,1.04e-23,13;CL:0000051,1.04e-23,13;CL:0000084,1.19e-23,11;CL:0000827,1.19e-23,11;CL:0000219,1.14e-22,54;CL:0000738,2.28e-20,17;CL:0002087,2.28e-20,17;CL:0000791,3.29e-20,9;CL:0000789,3.29e-20,9;CL:0002420,3.29e-20,9;CL:0002419,3.29e-20,9;CL:0000790,3.29e-20,9;CL:0002031,6.88e-20,25;CL:0000034,1.33e-19,97;CL:0000624,3.91e-18,8;CL:0000723,8.15e-17,91;CL:0000048,8.15e-17,91;CL:0000893,5.25e-14,6;CL:0002489,5.25e-14,6;CL:0000898,5.25e-14,6;CL:0000809,5.25e-14,6;CL:0000810,5.25e-14,6;CL:0000895,5.25e-14,6;CL:0000808,5.25e-14,6;CL:0000894,5.25e-14,6;CL:0000806,5.25e-14,6;CL:0000807,5.25e-14,6;CL:0000805,5.25e-14,6;CL:0002425,5.25e-14,6;CL:0002436,5.25e-14,6;CL:0002427,5.25e-14,6;CL:0002428,5.25e-14,6;CL:0002429,5.25e-14,6;CL:0002433,5.25e-14,6;CL:0002431,5.25e-14,6;CL:0002432,5.25e-14,6;CL:0000049,2.89e-10,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.26e-07,3;DOID:4045,4.26e-07,3|ontology_enrichment_uberon=UBERON:0002193!5.66e-13!48;UBERON:0002390!2.91e-12!45;UBERON:0003061!2.91e-12!45;UBERON:0001004!3.78e-10!42;UBERON:0003081!8.16e-10!88;UBERON:0000065!8.89e-10!41;UBERON:0002405!1.75e-09!70;UBERON:0004177!3.43e-09!29;UBERON:0002384!1.77e-08!46;UBERON:0001041!4.48e-08!92;UBERON:0003408!1.95e-07!24;UBERON:0002370!4.51e-07!23;UBERON:0000974!4.51e-07!23;UBERON:0004807!4.51e-07!23;UBERON:0005058!4.51e-07!23;UBERON:0003351!4.51e-07!23;UBERON:0009113!4.51e-07!23;UBERON:0003295!4.51e-07!23;UBERON:0009722!4.51e-07!23;UBERON:0005562!4.51e-07!23;UBERON:0007690!4.51e-07!23;UBERON:0000077!6.75e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.68e-28,46;UBERON:0002390,2.80e-10,45;UBERON:0003061,2.80e-10,45;UBERON:0002371,1.78e-09,16;UBERON:0002193,2.17e-09,48;UBERON:0002405,2.17e-09,48;UBERON:0002204,1.57e-08,32|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.33575854382378,0,6.45616617207881,5.91312633037,7.0219357896598,2.39705155515707,1.83475965689274,3.59521532855532,4.28359971853087,0,0.202475267389826,0,2.5236973228659,1.50825876966313,2.97072756258621,0.0850432901510698,2.6808556824239,1.04479915655574,0.159992422793407,0.68822784320151,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,2.09265815368454,3.1253413780952,1.57057123192139,5.29408339227913,1.36609096991689,2.91306211818692,0.251793635951155,0.202753862439029,0,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,5.36904339384756,2.17608642603403,3.36093799142464,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,1.97773272513395,1.4209602298922,0.898800331555214,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.302286240427142,1.44932244350839,0,2.03991400112325,0,0.649776417447669,0.896053774194671,0.280888840263504,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0.578397427679647,0,0.323533699894818,0.220841518460394,0,0,0,0,0,5.27186547826049,5.99902730993408,4.06624726633807,0.149790639404823,0,0,0.173824320192276,0,0,0,0.407357455401265,0.746441823660558,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,3.51106593656617,2.57347907114715,3.12579849335152,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,0.369506380333209,0,0.162964976442026,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,1.75620283072019,0.472905432318573,0.8858587585951,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0.790575555893047,0,0,0,0,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.328281799490123,0,0.18542530201051,0.854354403989263,0.412773735926445,0.925972636848558,0.376736914009382,0.546776910884101,0.686334519619568,2.71965487990169,3.63873776041511,2.48759952847963,0.954670618015114,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0,0.209718688851422,0.483168241652012,0,1.26404448251271,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0.590758108698309,0.504832249740738,0.685861259894999,0.403304740547362,0.877120926657772,0.673482891482306,0.935015217452552,0,0,0.179427713218951,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0|short_description=p@chr12:4925036..4925055,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=433 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:4925036..4925055,- | |||
|id=chr12:4925036..4925055,- | |||
|ontology_enrichment_celltype=CL:0000838!1.43e-09!12;CL:0000988!5.82e-09!32;CL:0002032!5.82e-09!32;CL:0000037!5.82e-09!32;CL:0000566!5.82e-09!32;CL:0000837!5.82e-09!32;CL:0000084!8.01e-09!11;CL:0000827!8.01e-09!11;CL:0002320!1.77e-08!46;CL:0000134!1.77e-08!46;CL:0000542!2.70e-08!13;CL:0000051!2.70e-08!13;CL:0000219!8.19e-08!54;CL:0000791!1.09e-07!9;CL:0000789!1.09e-07!9;CL:0002420!1.09e-07!9;CL:0002419!1.09e-07!9;CL:0000790!1.09e-07!9;CL:0000738!2.62e-07!17;CL:0002087!2.62e-07!17;CL:0000624!5.25e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.53e-30,32;CL:0002032,2.53e-30,32;CL:0000037,2.53e-30,32;CL:0000837,2.53e-30,32;CL:0002320,9.68e-28,46;CL:0000134,9.68e-28,46;CL:0000838,6.31e-26,12;CL:0000542,1.04e-23,13;CL:0000051,1.04e-23,13;CL:0000084,1.19e-23,11;CL:0000827,1.19e-23,11;CL:0000219,1.14e-22,54;CL:0000738,2.28e-20,17;CL:0002087,2.28e-20,17;CL:0000791,3.29e-20,9;CL:0000789,3.29e-20,9;CL:0002420,3.29e-20,9;CL:0002419,3.29e-20,9;CL:0000790,3.29e-20,9;CL:0002031,6.88e-20,25;CL:0000034,1.33e-19,97;CL:0000624,3.91e-18,8;CL:0000723,8.15e-17,91;CL:0000048,8.15e-17,91;CL:0000893,5.25e-14,6;CL:0002489,5.25e-14,6;CL:0000898,5.25e-14,6;CL:0000809,5.25e-14,6;CL:0000810,5.25e-14,6;CL:0000895,5.25e-14,6;CL:0000808,5.25e-14,6;CL:0000894,5.25e-14,6;CL:0000806,5.25e-14,6;CL:0000807,5.25e-14,6;CL:0000805,5.25e-14,6;CL:0002425,5.25e-14,6;CL:0002436,5.25e-14,6;CL:0002427,5.25e-14,6;CL:0002428,5.25e-14,6;CL:0002429,5.25e-14,6;CL:0002433,5.25e-14,6;CL:0002431,5.25e-14,6;CL:0002432,5.25e-14,6;CL:0000049,2.89e-10,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.26e-07,3;DOID:4045,4.26e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.66e-13!48;UBERON:0002390!2.91e-12!45;UBERON:0003061!2.91e-12!45;UBERON:0001004!3.78e-10!42;UBERON:0003081!8.16e-10!88;UBERON:0000065!8.89e-10!41;UBERON:0002405!1.75e-09!70;UBERON:0004177!3.43e-09!29;UBERON:0002384!1.77e-08!46;UBERON:0001041!4.48e-08!92;UBERON:0003408!1.95e-07!24;UBERON:0002370!4.51e-07!23;UBERON:0000974!4.51e-07!23;UBERON:0004807!4.51e-07!23;UBERON:0005058!4.51e-07!23;UBERON:0003351!4.51e-07!23;UBERON:0009113!4.51e-07!23;UBERON:0003295!4.51e-07!23;UBERON:0009722!4.51e-07!23;UBERON:0005562!4.51e-07!23;UBERON:0007690!4.51e-07!23;UBERON:0000077!6.75e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.68e-28,46;UBERON:0002390,2.80e-10,45;UBERON:0003061,2.80e-10,45;UBERON:0002371,1.78e-09,16;UBERON:0002193,2.17e-09,48;UBERON:0002405,2.17e-09,48;UBERON:0002204,1.57e-08,32 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.33575854382378,0,6.45616617207881,5.91312633037,7.0219357896598,2.39705155515707,1.83475965689274,3.59521532855532,4.28359971853087,0,0.202475267389826,0,2.5236973228659,1.50825876966313,2.97072756258621,0.0850432901510698,2.6808556824239,1.04479915655574,0.159992422793407,0.68822784320151,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,2.09265815368454,3.1253413780952,1.57057123192139,5.29408339227913,1.36609096991689,2.91306211818692,0.251793635951155,0.202753862439029,0,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,5.36904339384756,2.17608642603403,3.36093799142464,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,1.97773272513395,1.4209602298922,0.898800331555214,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.302286240427142,1.44932244350839,0,2.03991400112325,0,0.649776417447669,0.896053774194671,0.280888840263504,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0.578397427679647,0,0.323533699894818,0.220841518460394,0,0,0,0,0,5.27186547826049,5.99902730993408,4.06624726633807,0.149790639404823,0,0,0.173824320192276,0,0,0,0.407357455401265,0.746441823660558,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,3.51106593656617,2.57347907114715,3.12579849335152,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,0.369506380333209,0,0.162964976442026,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,1.75620283072019,0.472905432318573,0.8858587585951,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0.790575555893047,0,0,0,0,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.328281799490123,0,0.18542530201051,0.854354403989263,0.412773735926445,0.925972636848558,0.376736914009382,0.546776910884101,0.686334519619568,2.71965487990169,3.63873776041511,2.48759952847963,0.954670618015114,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0,0.209718688851422,0.483168241652012,0,1.26404448251271,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0.590758108698309,0.504832249740738,0.685861259894999,0.403304740547362,0.877120926657772,0.673482891482306,0.935015217452552,0,0,0.179427713218951,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr12:4925036..4925055,- | |||
}} |
Revision as of 22:53, 12 September 2013
Short description: | p@chr12:4925036..4925055, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:4925036..4925055, - |
Coexpression cluster: | MCL_coexpression_mm9:433 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.68e-28 | 46 |
hematopoietic system | 2.80e-10 | 45 |
blood island | 2.80e-10 | 45 |
bone marrow | 1.78e-09 | 16 |
hemolymphoid system | 2.17e-09 | 48 |
immune system | 2.17e-09 | 48 |
musculoskeletal system | 1.57e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.26e-07 | 3 |
muscle cancer | 4.26e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.