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FFCP PHASE1:Mm9::chr2:34227659..34227674,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18516|HGNC=|UniProt=O35317|association_with_transcript=-101bp_to_ENSMUST00000113132_5end|description=CAGE_peak_3_at_Pbx3_5end|id=chr2:34227659..34227674,-|ontology_enrichment_celltype=CL:0000540!1.36e-08!33;CL:0000047!1.36e-08!33;CL:0000031!1.36e-08!33;CL:0000404!1.36e-08!33;CL:0000117!2.76e-08!23;CL:0000337!2.76e-08!23;CL:0000393!2.43e-07!39;CL:0000211!2.43e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,2.19e-12,33;CL:0000047,2.19e-12,33;CL:0000031,2.19e-12,33;CL:0000404,2.19e-12,33;CL:0000117,1.08e-11,23;CL:0000337,1.08e-11,23;CL:0000393,2.74e-10,39;CL:0000211,2.74e-10,39;CL:0000221,1.09e-08,44;CL:0000133,1.09e-08,44;CL:0002319,5.94e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.13e-11!102;UBERON:0000924!7.13e-11!102;UBERON:0006601!7.13e-11!102;UBERON:0001017!2.48e-10!73;UBERON:0005743!2.48e-10!73;UBERON:0000073!1.46e-09!75;UBERON:0001016!1.46e-09!75;UBERON:0002346!1.36e-08!71;UBERON:0003075!1.36e-08!71;UBERON:0007284!1.36e-08!71;UBERON:0000033!2.79e-08!63;UBERON:0001049!2.94e-07!52;UBERON:0005068!2.94e-07!52;UBERON:0006241!2.94e-07!52;UBERON:0007135!2.94e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.75e-14,73;UBERON:0001016,8.91e-14,75;UBERON:0004121,8.59e-13,95;UBERON:0000924,8.59e-13,95;UBERON:0006601,8.59e-13,95;UBERON:0000073,1.30e-11,54;UBERON:0001049,3.62e-10,52;UBERON:0005068,3.62e-10,52;UBERON:0006241,3.62e-10,52;UBERON:0007135,3.62e-10,52;UBERON:0010371,1.14e-09,73;UBERON:0002346,1.38e-09,64;UBERON:0003075,1.38e-09,64;UBERON:0007284,1.38e-09,64;UBERON:0010314,1.84e-09,92;UBERON:0002420,4.30e-09,8;UBERON:0007245,4.30e-09,8;UBERON:0010009,4.30e-09,8;UBERON:0010011,4.30e-09,8;UBERON:0000454,4.30e-09,8;UBERON:0000955,2.75e-07,47;UBERON:0006238,2.75e-07,47;UBERON:0004111,5.81e-07,122;UBERON:0000025,7.17e-07,114;UBERON:0002020,8.79e-07,34|phase1_expression=2.08193501236232,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0.239316476986009,0,0,0.999329285446988,0.607425802169478,0,0.315462165358238,0.685572168028694,0,0.850432901510698,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.866554859253824,0.498703936075477,0.612508068787107,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.608261587317087,0.734187008646726,0,0,0.659058548203415,0.194429899074283,0.699932108126813,0,0.838913030288682,1.45072428402269,0,0.257259436035947,0.286533439938757,1.03134418455488,2.22548106945558,2.11596391708813,0.633831403506179,0.677689064138264,0.889294796111139,1.3498495759221,0,0.7104801149461,0.898800331555214,0.384218305321555,0.518448061542388,0.405017814995072,0,1.42825492201902,2.20868540951614,1.95985278743926,0.862609239164127,0.919218786610021,1.10115880999389,1.91531007127782,2.61131106535614,1.05509030184155,1.55528994124096,2.08365348222704,1.67509799400829,2.8138130501584,1.98637722109853,1.17851434189467,1.28134512719193,2.05039390407831,0.227178579999552,0.226714680320357,3.47837386442013,0,0,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0,1.41335829804136,2.11265129665021,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,1.03575153458869,1.92974780784272,0.520455980298408,0.304465478312141,1.15307748628029,0.301445281105245,1.05829836422134,0.628332956648377,0,0.289198713839823,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0.718890747035522,0,0.508280908292259,1.64769703345305,2.74500361691176,1.25654352112864,0.521472960576829,0,1.87009240103604,1.1356888414743,0.81471491080253,0.870848794270651,1.26361379216837,0.631325567659422,0.910843100738926,0.919608417733892,0.900310649026746,1.20563854268572,1.08858398642125,0.2562274405697,1.3118241438362,1.03481348295606,0,1.13463648100692,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0.621377317606506,1.64168241986767,1.08037236876609,0.710234206755631,0.787056926989615,0.462801338662135,0.930135779001631,0.268273401399619,1.16765342367169,0.329119699826961,0.164167464079095,0.729619285912702,0.730999937126662,0.439100230582101,0.939444931322602,0.210289948564127,0.308713837137853,0.330418782983798,0.264450566663544,1.06644125267617,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.597423819763102,1.13800740571849,1.02823661348756,0,0.610953983535943,0.969762435838129,1.8936671370386,1.01178459398812,0.738050739898011,0.627994911365499,0.863780147452604,0.592905254174298,0.500535317148282,0.786235980452812,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.35879482704382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|EntrezGene=18516
|HGNC=
|UniProt=O35317
|association_with_transcript=-101bp_to_ENSMUST00000113132_5end
|description=CAGE_peak_3_at_Pbx3_5end
|id=chr2:34227659..34227674,-
|ontology_enrichment_celltype=CL:0000540!1.36e-08!33;CL:0000047!1.36e-08!33;CL:0000031!1.36e-08!33;CL:0000404!1.36e-08!33;CL:0000117!2.76e-08!23;CL:0000337!2.76e-08!23;CL:0000393!2.43e-07!39;CL:0000211!2.43e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.19e-12,33;CL:0000047,2.19e-12,33;CL:0000031,2.19e-12,33;CL:0000404,2.19e-12,33;CL:0000117,1.08e-11,23;CL:0000337,1.08e-11,23;CL:0000393,2.74e-10,39;CL:0000211,2.74e-10,39;CL:0000221,1.09e-08,44;CL:0000133,1.09e-08,44;CL:0002319,5.94e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!7.13e-11!102;UBERON:0000924!7.13e-11!102;UBERON:0006601!7.13e-11!102;UBERON:0001017!2.48e-10!73;UBERON:0005743!2.48e-10!73;UBERON:0000073!1.46e-09!75;UBERON:0001016!1.46e-09!75;UBERON:0002346!1.36e-08!71;UBERON:0003075!1.36e-08!71;UBERON:0007284!1.36e-08!71;UBERON:0000033!2.79e-08!63;UBERON:0001049!2.94e-07!52;UBERON:0005068!2.94e-07!52;UBERON:0006241!2.94e-07!52;UBERON:0007135!2.94e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.75e-14,73;UBERON:0001016,8.91e-14,75;UBERON:0004121,8.59e-13,95;UBERON:0000924,8.59e-13,95;UBERON:0006601,8.59e-13,95;UBERON:0000073,1.30e-11,54;UBERON:0001049,3.62e-10,52;UBERON:0005068,3.62e-10,52;UBERON:0006241,3.62e-10,52;UBERON:0007135,3.62e-10,52;UBERON:0010371,1.14e-09,73;UBERON:0002346,1.38e-09,64;UBERON:0003075,1.38e-09,64;UBERON:0007284,1.38e-09,64;UBERON:0010314,1.84e-09,92;UBERON:0002420,4.30e-09,8;UBERON:0007245,4.30e-09,8;UBERON:0010009,4.30e-09,8;UBERON:0010011,4.30e-09,8;UBERON:0000454,4.30e-09,8;UBERON:0000955,2.75e-07,47;UBERON:0006238,2.75e-07,47;UBERON:0004111,5.81e-07,122;UBERON:0000025,7.17e-07,114;UBERON:0002020,8.79e-07,34
|phase1_expression=2.08193501236232,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0.239316476986009,0,0,0.999329285446988,0.607425802169478,0,0.315462165358238,0.685572168028694,0,0.850432901510698,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.866554859253824,0.498703936075477,0.612508068787107,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.608261587317087,0.734187008646726,0,0,0.659058548203415,0.194429899074283,0.699932108126813,0,0.838913030288682,1.45072428402269,0,0.257259436035947,0.286533439938757,1.03134418455488,2.22548106945558,2.11596391708813,0.633831403506179,0.677689064138264,0.889294796111139,1.3498495759221,0,0.7104801149461,0.898800331555214,0.384218305321555,0.518448061542388,0.405017814995072,0,1.42825492201902,2.20868540951614,1.95985278743926,0.862609239164127,0.919218786610021,1.10115880999389,1.91531007127782,2.61131106535614,1.05509030184155,1.55528994124096,2.08365348222704,1.67509799400829,2.8138130501584,1.98637722109853,1.17851434189467,1.28134512719193,2.05039390407831,0.227178579999552,0.226714680320357,3.47837386442013,0,0,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0,1.41335829804136,2.11265129665021,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,1.03575153458869,1.92974780784272,0.520455980298408,0.304465478312141,1.15307748628029,0.301445281105245,1.05829836422134,0.628332956648377,0,0.289198713839823,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0.718890747035522,0,0.508280908292259,1.64769703345305,2.74500361691176,1.25654352112864,0.521472960576829,0,1.87009240103604,1.1356888414743,0.81471491080253,0.870848794270651,1.26361379216837,0.631325567659422,0.910843100738926,0.919608417733892,0.900310649026746,1.20563854268572,1.08858398642125,0.2562274405697,1.3118241438362,1.03481348295606,0,1.13463648100692,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0.621377317606506,1.64168241986767,1.08037236876609,0.710234206755631,0.787056926989615,0.462801338662135,0.930135779001631,0.268273401399619,1.16765342367169,0.329119699826961,0.164167464079095,0.729619285912702,0.730999937126662,0.439100230582101,0.939444931322602,0.210289948564127,0.308713837137853,0.330418782983798,0.264450566663544,1.06644125267617,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.597423819763102,1.13800740571849,1.02823661348756,0,0.610953983535943,0.969762435838129,1.8936671370386,1.01178459398812,0.738050739898011,0.627994911365499,0.863780147452604,0.592905254174298,0.500535317148282,0.786235980452812,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.923765950833023,0.947457058852424,1.30371981153621,0.509235257325564,0.704070744865506,1.17254380209271,1.42826184531608,1.95133647857799,0.472905432318573,1.10732344824387,1.59454768657487,1.47476983244164,1.03610989119537,0.723245292907558,3.01582567878545,0.54390568381871,0.491764273019036,0.275936746304732,2.24770825982909,2.10981035865966,0.491804836130026,0.252470927204373,0.94652465824877,0,0.430846795465598,0.716906393857656,0,1.41538265394416,1.21443210502468,1.16902343164525,1.97643888973262,8.35435422696698,0.425820255624806,0.534196811001766,0.651547837414304,0.329940245945071,0,0.728341908464944,0.604647113929502,1.32023555829129,0.295301892880773,1.22974059177571,0.516856586336442,2.54473610634254,1.78248689192361,0.948110273807448,1.05418608574999,2.06271086496374,1.36175842301515,1.62054984628179,0.517434735131018,1.07168517515796,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0.938686832254841,0,0.220528398054962,0.8244312647074,0.645857706783622,1.02531972377865,0.596861720015682,0.492422699235184,0,1.29797711407357,0.512612642393558,0.412773735926445,0.740778109478847,0.188368457004691,1.0935538217682,0.228778173206523,0.339956859987711,0.559805809294632,0.690999869022119,2.86401185404534,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0,0.674321731924103,1.1571483801547,0.785267825952089,0.388844919875379,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0.258319646955462,0.506868376472335,0.469428954583016,0.781226309063701,0.314578033277133,0.483168241652012,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0.240390899039938,0,0.302899349844443,0.304827226619999,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.453460767230423,0,0.538283139656854,0.503653849092235,0.579568782096571,0.375364950902364,0.183151624267265,0.643105137237198,0,0.564751842617067,1.38097570952153,0.572895513439397,0.68741272937475,0,0.755393897389701,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.830298780673413,1.19707462020309,0.170733605754134,0.729320151204882,0.209613162627982,0.367687016900028,1.11123363900808,0.618105171716683,0,0.252697211763798,0,0.943131706930381,0.37456602987953,0.768301828858431,0.861532034334199,0.476293691283074,1.0429589335037,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.953744759789284,0.872078499793971,1.12931256498397,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0,0.593175090620871,0.492522411877817,0.818462086339379,0.619747364743864,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.231867835620421
|short_description=p3@Pbx3
}}

Revision as of 23:52, 13 September 2013

Short description:p3@Pbx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pbx3_5end
Coexpression cluster:NA
Association with transcript: -101bp_to_ENSMUST00000113132_5end
EntrezGene:Pbx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pbx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.19e-1233
neuronal stem cell2.19e-1233
neuroblast2.19e-1233
electrically signaling cell2.19e-1233
CNS neuron (sensu Vertebrata)1.08e-1123
neuroblast (sensu Vertebrata)1.08e-1123
electrically responsive cell2.74e-1039
electrically active cell2.74e-1039
ectodermal cell1.09e-0844
neurectodermal cell1.09e-0844
neural cell5.94e-0843







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