FFCP PHASE1:Mm9::chr13:105077113..105077142,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=68|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:105077113..105077142,+|id=chr13:105077113..105077142,+|ontology_enrichment_celltype=CL:0000542!1.81e-09!13;CL:0000051!1.81e-09!13;CL:0000838!5.51e-09!12;CL:0000738!6.24e-09!17;CL:0002087!6.24e-09!17;CL:0000084!2.56e-08!11;CL:0000827!2.56e-08!11;CL:0000988!3.57e-08!32;CL:0002032!3.57e-08!32;CL:0000037!3.57e-08!32;CL:0000566!3.57e-08!32;CL:0000837!3.57e-08!32;CL:0000791!1.57e-07!9;CL:0000789!1.57e-07!9;CL:0002420!1.57e-07!9;CL:0002419!1.57e-07!9;CL:0000790!1.57e-07!9;CL:0002031!5.73e-07!25;CL:0000624!6.90e-07!8|ontology_enrichment_celltype_v019_2=CL:0000542,5.82e-15,13;CL:0000051,5.82e-15,13;CL:0000838,3.82e-14,12;CL:0000738,1.24e-13,17;CL:0002087,1.24e-13,17;CL:0000988,1.85e-13,32;CL:0002032,1.85e-13,32;CL:0000037,1.85e-13,32;CL:0000837,1.85e-13,32;CL:0002031,3.70e-13,25;CL:0000084,5.15e-13,11;CL:0000827,5.15e-13,11;CL:0000791,1.10e-11,9;CL:0000789,1.10e-11,9;CL:0002420,1.10e-11,9;CL:0002419,1.10e-11,9;CL:0000790,1.10e-11,9;CL:0000624,1.34e-10,8;CL:0000893,2.06e-08,6;CL:0002489,2.06e-08,6;CL:0000898,2.06e-08,6;CL:0000809,2.06e-08,6;CL:0000810,2.06e-08,6;CL:0000895,2.06e-08,6;CL:0000808,2.06e-08,6;CL:0000894,2.06e-08,6;CL:0000806,2.06e-08,6;CL:0000807,2.06e-08,6;CL:0000805,2.06e-08,6;CL:0002425,2.06e-08,6;CL:0002436,2.06e-08,6;CL:0002427,2.06e-08,6;CL:0002428,2.06e-08,6;CL:0002429,2.06e-08,6;CL:0002433,2.06e-08,6;CL:0002431,2.06e-08,6;CL:0002432,2.06e-08,6;CL:0002320,6.32e-08,46;CL:0000134,6.32e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.02e-12!48;UBERON:0002390!3.59e-12!45;UBERON:0003061!3.59e-12!45;UBERON:0004177!5.71e-12!29;UBERON:0002370!2.75e-11!23;UBERON:0000974!2.75e-11!23;UBERON:0004807!2.75e-11!23;UBERON:0005058!2.75e-11!23;UBERON:0003351!2.75e-11!23;UBERON:0009113!2.75e-11!23;UBERON:0003295!2.75e-11!23;UBERON:0009722!2.75e-11!23;UBERON:0005562!2.75e-11!23;UBERON:0007690!2.75e-11!23;UBERON:0000072!4.67e-11!27;UBERON:0006562!1.28e-10!24;UBERON:0001557!1.28e-10!24;UBERON:0001042!1.28e-10!24;UBERON:0008814!1.28e-10!24;UBERON:0009145!1.28e-10!24;UBERON:0003408!3.67e-10!24;UBERON:0003081!7.66e-10!88;UBERON:0000063!5.81e-08!35;UBERON:0002405!3.57e-07!70;UBERON:0000065!5.46e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.81e-21,45;UBERON:0003061,4.81e-21,45;UBERON:0002193,1.52e-20,48;UBERON:0002405,1.52e-20,48;UBERON:0004177,4.60e-20,29;UBERON:0005057,4.60e-20,29;UBERON:0002370,6.94e-20,23;UBERON:0000974,6.94e-20,23;UBERON:0004807,6.94e-20,23;UBERON:0005058,6.94e-20,23;UBERON:0003351,6.94e-20,23;UBERON:0009113,6.94e-20,23;UBERON:0003295,6.94e-20,23;UBERON:0009722,6.94e-20,23;UBERON:0005562,6.94e-20,23;UBERON:0007690,6.94e-20,23;UBERON:0006562,1.01e-18,24;UBERON:0003408,1.01e-18,24;UBERON:0001557,1.01e-18,24;UBERON:0001042,1.01e-18,24;UBERON:0008814,1.01e-18,24;UBERON:0009145,1.01e-18,24;UBERON:0000072,2.36e-18,27;UBERON:0007811,7.13e-16,36;UBERON:0000153,3.05e-15,43;UBERON:0000077,4.53e-15,35;UBERON:0003081,5.51e-14,87;UBERON:0000065,2.27e-09,41;UBERON:0001004,5.67e-09,42;UBERON:0002384,6.32e-08,46;UBERON:0000926,1.15e-07,120;UBERON:0004120,1.15e-07,120;UBERON:0006603,1.15e-07,120|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,14.5909355488981,16.3314917695933,9.12851652655775,39.2089147236406,25.7664073554937,7.36163138704185,6.6439505838438,1.33243904726265,1.41732687172878,0,6.62470547252299,6.99283611389268,3.81950686618227,0.425216450755349,1.48936426801328,2.08959831311148,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.377690453926732,0.811015449756117,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,8.38913030288682,5.80289713609076,7.05796978199174,0.257259436035947,0,0,0.606949382578793,0,0,0,0,0,0,1.4209602298922,0.898800331555214,1.15265491596466,0,0.135005938331691,0.210324961351382,1.42825492201902,1.76694832761291,0.489963196859816,0.287536413054709,0,2.20231761998777,0.893811366596314,0.768032666281217,0.263772575460388,0.274462930807229,0,0.558365998002762,1.12552522006336,0.763991238884051,2.65165726926301,3.84403538157578,0.931997229126503,0.302904773332736,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,1.69012103732017,2.56652954828636,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.34255163915718,3.6251303710604,0.445326417194474,0,0.304465478312141,0.691846491768175,0.60289056221049,0.587943535678524,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0.628340120440365,0,1.1981512450592,0.599902730993408,1.39777249780371,0.898743836428936,0,0.502617408451458,0.347648640384553,0.511430914660661,1.0389402227978,1.1356888414743,0.916554274652847,0.995255764880744,0,0.210441855886474,3.25301107406759,1.83921683546778,0.360124259610698,1.05493372485001,0.5442919932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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:105077113..105077142,+ | |||
|id=chr13:105077113..105077142,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.81e-09!13;CL:0000051!1.81e-09!13;CL:0000838!5.51e-09!12;CL:0000738!6.24e-09!17;CL:0002087!6.24e-09!17;CL:0000084!2.56e-08!11;CL:0000827!2.56e-08!11;CL:0000988!3.57e-08!32;CL:0002032!3.57e-08!32;CL:0000037!3.57e-08!32;CL:0000566!3.57e-08!32;CL:0000837!3.57e-08!32;CL:0000791!1.57e-07!9;CL:0000789!1.57e-07!9;CL:0002420!1.57e-07!9;CL:0002419!1.57e-07!9;CL:0000790!1.57e-07!9;CL:0002031!5.73e-07!25;CL:0000624!6.90e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.82e-15,13;CL:0000051,5.82e-15,13;CL:0000838,3.82e-14,12;CL:0000738,1.24e-13,17;CL:0002087,1.24e-13,17;CL:0000988,1.85e-13,32;CL:0002032,1.85e-13,32;CL:0000037,1.85e-13,32;CL:0000837,1.85e-13,32;CL:0002031,3.70e-13,25;CL:0000084,5.15e-13,11;CL:0000827,5.15e-13,11;CL:0000791,1.10e-11,9;CL:0000789,1.10e-11,9;CL:0002420,1.10e-11,9;CL:0002419,1.10e-11,9;CL:0000790,1.10e-11,9;CL:0000624,1.34e-10,8;CL:0000893,2.06e-08,6;CL:0002489,2.06e-08,6;CL:0000898,2.06e-08,6;CL:0000809,2.06e-08,6;CL:0000810,2.06e-08,6;CL:0000895,2.06e-08,6;CL:0000808,2.06e-08,6;CL:0000894,2.06e-08,6;CL:0000806,2.06e-08,6;CL:0000807,2.06e-08,6;CL:0000805,2.06e-08,6;CL:0002425,2.06e-08,6;CL:0002436,2.06e-08,6;CL:0002427,2.06e-08,6;CL:0002428,2.06e-08,6;CL:0002429,2.06e-08,6;CL:0002433,2.06e-08,6;CL:0002431,2.06e-08,6;CL:0002432,2.06e-08,6;CL:0002320,6.32e-08,46;CL:0000134,6.32e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.02e-12!48;UBERON:0002390!3.59e-12!45;UBERON:0003061!3.59e-12!45;UBERON:0004177!5.71e-12!29;UBERON:0002370!2.75e-11!23;UBERON:0000974!2.75e-11!23;UBERON:0004807!2.75e-11!23;UBERON:0005058!2.75e-11!23;UBERON:0003351!2.75e-11!23;UBERON:0009113!2.75e-11!23;UBERON:0003295!2.75e-11!23;UBERON:0009722!2.75e-11!23;UBERON:0005562!2.75e-11!23;UBERON:0007690!2.75e-11!23;UBERON:0000072!4.67e-11!27;UBERON:0006562!1.28e-10!24;UBERON:0001557!1.28e-10!24;UBERON:0001042!1.28e-10!24;UBERON:0008814!1.28e-10!24;UBERON:0009145!1.28e-10!24;UBERON:0003408!3.67e-10!24;UBERON:0003081!7.66e-10!88;UBERON:0000063!5.81e-08!35;UBERON:0002405!3.57e-07!70;UBERON:0000065!5.46e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.81e-21,45;UBERON:0003061,4.81e-21,45;UBERON:0002193,1.52e-20,48;UBERON:0002405,1.52e-20,48;UBERON:0004177,4.60e-20,29;UBERON:0005057,4.60e-20,29;UBERON:0002370,6.94e-20,23;UBERON:0000974,6.94e-20,23;UBERON:0004807,6.94e-20,23;UBERON:0005058,6.94e-20,23;UBERON:0003351,6.94e-20,23;UBERON:0009113,6.94e-20,23;UBERON:0003295,6.94e-20,23;UBERON:0009722,6.94e-20,23;UBERON:0005562,6.94e-20,23;UBERON:0007690,6.94e-20,23;UBERON:0006562,1.01e-18,24;UBERON:0003408,1.01e-18,24;UBERON:0001557,1.01e-18,24;UBERON:0001042,1.01e-18,24;UBERON:0008814,1.01e-18,24;UBERON:0009145,1.01e-18,24;UBERON:0000072,2.36e-18,27;UBERON:0007811,7.13e-16,36;UBERON:0000153,3.05e-15,43;UBERON:0000077,4.53e-15,35;UBERON:0003081,5.51e-14,87;UBERON:0000065,2.27e-09,41;UBERON:0001004,5.67e-09,42;UBERON:0002384,6.32e-08,46;UBERON:0000926,1.15e-07,120;UBERON:0004120,1.15e-07,120;UBERON:0006603,1.15e-07,120 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,14.5909355488981,16.3314917695933,9.12851652655775,39.2089147236406,25.7664073554937,7.36163138704185,6.6439505838438,1.33243904726265,1.41732687172878,0,6.62470547252299,6.99283611389268,3.81950686618227,0.425216450755349,1.48936426801328,2.08959831311148,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.377690453926732,0.811015449756117,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,8.38913030288682,5.80289713609076,7.05796978199174,0.257259436035947,0,0,0.606949382578793,0,0,0,0,0,0,1.4209602298922,0.898800331555214,1.15265491596466,0,0.135005938331691,0.210324961351382,1.42825492201902,1.76694832761291,0.489963196859816,0.287536413054709,0,2.20231761998777,0.893811366596314,0.768032666281217,0.263772575460388,0.274462930807229,0,0.558365998002762,1.12552522006336,0.763991238884051,2.65165726926301,3.84403538157578,0.931997229126503,0.302904773332736,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,1.69012103732017,2.56652954828636,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.34255163915718,3.6251303710604,0.445326417194474,0,0.304465478312141,0.691846491768175,0.60289056221049,0.587943535678524,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0.628340120440365,0,1.1981512450592,0.599902730993408,1.39777249780371,0.898743836428936,0,0.502617408451458,0.347648640384553,0.511430914660661,1.0389402227978,1.1356888414743,0.916554274652847,0.995255764880744,0,0.210441855886474,3.25301107406759,1.83921683546778,0.360124259610698,1.05493372485001,0.544291993210623,1.15302348256365,0.374806898238915,0.517406741478031,0.862271971731369,1.70195472151037,1.58356011747554,0.876782929710299,1.39023624612799,0.348252166522167,0.205782136407943,2.38841120182192,1.40442637462647,0.257347907114715,0.852490498186778,5.17814431338755,3.51789089971644,1.80062061461015,1.42046841351126,1.37734962223183,1.23413690309903,1.16266972375204,1.07309360559848,1.05088808130453,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,0.102904612379284,0.330418782983798,0,2.34617075588757,3.0190767341857,0.644337306610467,0,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0,0.58489226135736,0.898819408654221,0,0.199141273254367,0,1.14248512609729,1.1270773567308,1.01825663922657,1.74557238450863,1.05203729835478,0.569128834118316,0.590440591918409,0.784993639206874,0.863780147452604,0,0.83422552858047,1.37591296579242,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0.739012760666419,0.568474235311454,0.162964976442026,0.848725428875941,0,0,0,0.390267295715598,0,0.44292937929755,0.797273843287435,0.81931657357869,0.690739927463582,0.144649058581512,0,2.71952841909355,0,0,0.481651769963376,0.703270119553219,0,0,0.94652465824877,0,1.72338718186239,0,1.11399337041197,0.566153061577665,0.404810701674894,0,0,0,0.851640511249612,0,0.651547837414304,0.494910368917606,0,0.485561272309963,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,1.70219802876894,4.86164953884538,0.258717367565509,0.643011105094777,1.41872186913819,0.713475270408282,0.493647061806363,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0.361877549568935,0.119372344003136,0.164140899745061,0,1.11255181206306,2.22132145037209,0.412773735926445,1.11116716421827,0.376736914009382,1.6403307326523,1.14389086603261,1.18984900995699,1.39951452323658,0.829199842826543,0,2.84702394223022,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.747582730219894,0.330916980914195,0.388902376688095,0.129159823477731,0.675824501963113,0.704143431874524,0.5208175393758,0.104859344425711,0.724752362478018,0,8.84831137758899,1.41907650703115,2.15693010046137,2.20865399062252,1.9692936523423,3.57626438606277,5.16840432935866,3.54454865218985,4.74542314756294,5.71551049912499,5.34378781225255,7.21188317474168,6.92725259810372,9.58390597888865,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0.460325236507177,0,2.06223818812425,0,0,0.675022500231806,0,1.35942722695261,0,1.3492355185943,1.19707462020309,1.19513524027894,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.749132059759059,0.576226371643824,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.564656282491984,0.592302255241736,0.548783918618318,0.26306971143784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| |||
|short_description=p@chr13:105077113..105077142,+ | |||
}} |
Revision as of 23:46, 12 September 2013
Short description: | p@chr13:105077113..105077142, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:105077113..105077142, + |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.81e-21 | 45 |
blood island | 4.81e-21 | 45 |
hemolymphoid system | 1.52e-20 | 48 |
immune system | 1.52e-20 | 48 |
hemopoietic organ | 4.60e-20 | 29 |
immune organ | 4.60e-20 | 29 |
thymus | 6.94e-20 | 23 |
neck | 6.94e-20 | 23 |
respiratory system epithelium | 6.94e-20 | 23 |
hemolymphoid system gland | 6.94e-20 | 23 |
pharyngeal epithelium | 6.94e-20 | 23 |
thymic region | 6.94e-20 | 23 |
pharyngeal gland | 6.94e-20 | 23 |
entire pharyngeal arch endoderm | 6.94e-20 | 23 |
thymus primordium | 6.94e-20 | 23 |
early pharyngeal endoderm | 6.94e-20 | 23 |
pharynx | 1.01e-18 | 24 |
gland of gut | 1.01e-18 | 24 |
upper respiratory tract | 1.01e-18 | 24 |
chordate pharynx | 1.01e-18 | 24 |
pharyngeal arch system | 1.01e-18 | 24 |
pharyngeal region of foregut | 1.01e-18 | 24 |
segment of respiratory tract | 2.36e-18 | 27 |
craniocervical region | 7.13e-16 | 36 |
anterior region of body | 3.05e-15 | 43 |
mixed endoderm/mesoderm-derived structure | 4.53e-15 | 35 |
lateral plate mesoderm | 5.51e-14 | 87 |
respiratory tract | 2.27e-09 | 41 |
respiratory system | 5.67e-09 | 42 |
connective tissue | 6.32e-08 | 46 |
mesoderm | 1.15e-07 | 120 |
mesoderm-derived structure | 1.15e-07 | 120 |
presumptive mesoderm | 1.15e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.