FFCP PHASE1:Hg19::chr1:68257400..68257442,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:68257400..68257442,-|id=chr1:68257400..68257442,-|ontology_enrichment_celltype=CL:0000055!3.23e-32!180;CL:0000222!2.07e-27!119;CL:0000057!4.78e-22!75;CL:0000192!3.92e-16!42;CL:0000514!3.92e-16!42;CL:0000680!6.37e-16!57;CL:0000056!6.37e-16!57;CL:0000355!6.37e-16!57;CL:0000187!2.22e-15!54;CL:0000359!3.99e-14!32;CL:0000183!5.97e-14!59;CL:0000077!1.92e-13!19;CL:0000393!1.07e-12!60;CL:0000211!1.07e-12!60;CL:0000213!4.36e-12!57;CL:0000215!4.36e-12!57;CL:0000220!1.41e-11!246;CL:0000548!2.03e-11!679;CL:0000004!2.03e-11!679;CL:0000255!2.03e-11!679;CL:0002321!3.43e-11!248;CL:0000012!5.56e-11!682;CL:0002620!1.80e-10!23;CL:0000144!3.74e-09!625|ontology_enrichment_celltype_v019=CL:0000077;5.95e-18;19!CL:0000359;2.20e-15;32!CL:0000192;5.24e-12;43!CL:0002620;9.22e-10;23!CL:0000057;1.25e-08;73!CL:0002556;4.59e-08;6!CL:0000213;3.16e-07;58!CL:0000215;3.16e-07;58|ontology_enrichment_celltype_v019_2=CL:0000222,3.20e-23,121;CL:0000077,3.00e-18,19;CL:0000057,1.77e-17,76;CL:0000359,4.85e-16,32;CL:0000192,2.05e-14,43;CL:0000514,2.05e-14,43;CL:0000213,2.97e-13,58;CL:0000215,2.97e-13,58;CL:0002321,1.09e-10,250;CL:0000187,3.52e-10,55;CL:0002620,3.68e-10,23;CL:0000680,5.17e-10,58;CL:0000056,5.17e-10,58;CL:0000355,5.17e-10,58;CL:0000076,1.94e-08,63;CL:0000393,2.30e-08,61;CL:0000211,2.30e-08,61;CL:0002556,4.38e-08,6|ontology_enrichment_development_v019=CL:0000514;5.24e-12;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.20e-19!83;UBERON:0002329!1.20e-19!83;UBERON:0003077!1.20e-19!83;UBERON:0003059!1.20e-19!83;UBERON:0007282!1.20e-19!83;UBERON:0009618!1.20e-19!83;UBERON:0007285!1.20e-19!83;UBERON:0001637!5.15e-19!42;UBERON:0003509!5.15e-19!42;UBERON:0004572!5.15e-19!42;UBERON:0002049!1.22e-18!79;UBERON:0007798!1.22e-18!79;UBERON:0004290!1.92e-16!70;UBERON:0002385!3.73e-15!63;UBERON:0001015!3.73e-15!63;UBERON:0000383!3.73e-15!63;UBERON:0001981!4.69e-15!60;UBERON:0007500!4.69e-15!60;UBERON:0004537!4.69e-15!60;UBERON:0006965!4.69e-15!60;UBERON:0001134!4.76e-15!61;UBERON:0002036!4.76e-15!61;UBERON:0003082!4.76e-15!61;UBERON:0000055!7.25e-15!69;UBERON:0004573!3.65e-14!33;UBERON:0004571!3.65e-14!33;UBERON:0004872!7.79e-14!84;UBERON:0000486!1.68e-13!82;UBERON:0004535!2.01e-13!110;UBERON:0001009!1.99e-12!113;UBERON:0000490!2.73e-10!138;UBERON:0005256!4.39e-10!143;UBERON:0002100!2.58e-09!216;UBERON:0000947!2.10e-08!21;UBERON:0010191!2.10e-08!21;UBERON:0003914!1.11e-07!118;UBERON:0000475!1.40e-07!365;UBERON:0003102!2.15e-07!95;UBERON:0002199!8.38e-07!45;UBERON:0002416!8.38e-07!45|ontology_enrichment_uberon_v019=UBERON:0001637;4.97e-17;42!UBERON:0003509;4.97e-17;42!UBERON:0004572;4.97e-17;42!UBERON:0004573;1.61e-14;33!UBERON:0004571;1.61e-14;33!UBERON:0007500;3.02e-09;56!UBERON:0001981;3.02e-09;56!UBERON:0004537;3.02e-09;56!UBERON:0000947;6.78e-09;21!UBERON:0010191;6.78e-09;21!UBERON:0001758;4.59e-08;6!UBERON:0003672;4.59e-08;6!UBERON:0000075;7.96e-08;16!UBERON:0000055;5.85e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.85e-23,42;UBERON:0003509,3.85e-23,42;UBERON:0004572,3.85e-23,42;UBERON:0004573,4.22e-16,33;UBERON:0004571,4.22e-16,33;UBERON:0007500,3.31e-15,59;UBERON:0001981,3.31e-15,59;UBERON:0004537,3.31e-15,59;UBERON:0006965,3.31e-15,59;UBERON:0002049,8.57e-14,78;UBERON:0007798,8.57e-14,78;UBERON:0004872,6.15e-13,83;UBERON:0000055,1.29e-12,68;UBERON:0007524,3.11e-10,73;UBERON:0004535,4.83e-10,109;UBERON:0002329,7.14e-10,71;UBERON:0003059,7.14e-10,71;UBERON:0007282,7.14e-10,71;UBERON:0004290,7.14e-10,71;UBERON:0009618,7.14e-10,71;UBERON:0003077,1.34e-09,72;UBERON:0007285,1.34e-09,72;UBERON:0001009,1.95e-09,112;UBERON:0003102,3.34e-09,99;UBERON:0000486,5.15e-09,83;UBERON:0001134,8.15e-09,62;UBERON:0002036,8.15e-09,62;UBERON:0003082,8.15e-09,62;UBERON:0007503,8.26e-09,78;UBERON:0000947,1.11e-08,21;UBERON:0010191,1.11e-08,21;UBERON:0002385,2.79e-08,64;UBERON:0001015,2.79e-08,64;UBERON:0000383,2.79e-08,64;UBERON:0001758,4.38e-08,6;UBERON:0003672,4.38e-08,6;UBERON:0000075,7.43e-08,16;UBERON:0000490,1.55e-07,148;UBERON:0003914,8.12e-07,117;UBERON:0002097,8.35e-07,41;UBERON:0003129,9.62e-07,7|phase1_expression=0.908391896352783,0.642301571672949,0.845726424575827,1.0007329835313,0.893922188854576,2.61701557230111,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,2.84662611808107,3.64537113300707,2.01697543935533,1.20538905604795,4.38186054232424,0,0.246242116153576,1.63200552995402,0,1.43117993565528,1.09499540058307,1.25542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,3.2529523714611,8.0214065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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:68257400..68257442,- | |||
|id=chr1:68257400..68257442,- | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-32!180;CL:0000222!2.07e-27!119;CL:0000057!4.78e-22!75;CL:0000192!3.92e-16!42;CL:0000514!3.92e-16!42;CL:0000680!6.37e-16!57;CL:0000056!6.37e-16!57;CL:0000355!6.37e-16!57;CL:0000187!2.22e-15!54;CL:0000359!3.99e-14!32;CL:0000183!5.97e-14!59;CL:0000077!1.92e-13!19;CL:0000393!1.07e-12!60;CL:0000211!1.07e-12!60;CL:0000213!4.36e-12!57;CL:0000215!4.36e-12!57;CL:0000220!1.41e-11!246;CL:0000548!2.03e-11!679;CL:0000004!2.03e-11!679;CL:0000255!2.03e-11!679;CL:0002321!3.43e-11!248;CL:0000012!5.56e-11!682;CL:0002620!1.80e-10!23;CL:0000144!3.74e-09!625 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.95e-18;19!CL:0000359;2.20e-15;32!CL:0000192;5.24e-12;43!CL:0002620;9.22e-10;23!CL:0000057;1.25e-08;73!CL:0002556;4.59e-08;6!CL:0000213;3.16e-07;58!CL:0000215;3.16e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.20e-23,121;CL:0000077,3.00e-18,19;CL:0000057,1.77e-17,76;CL:0000359,4.85e-16,32;CL:0000192,2.05e-14,43;CL:0000514,2.05e-14,43;CL:0000213,2.97e-13,58;CL:0000215,2.97e-13,58;CL:0002321,1.09e-10,250;CL:0000187,3.52e-10,55;CL:0002620,3.68e-10,23;CL:0000680,5.17e-10,58;CL:0000056,5.17e-10,58;CL:0000355,5.17e-10,58;CL:0000076,1.94e-08,63;CL:0000393,2.30e-08,61;CL:0000211,2.30e-08,61;CL:0002556,4.38e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000514;5.24e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.20e-19!83;UBERON:0002329!1.20e-19!83;UBERON:0003077!1.20e-19!83;UBERON:0003059!1.20e-19!83;UBERON:0007282!1.20e-19!83;UBERON:0009618!1.20e-19!83;UBERON:0007285!1.20e-19!83;UBERON:0001637!5.15e-19!42;UBERON:0003509!5.15e-19!42;UBERON:0004572!5.15e-19!42;UBERON:0002049!1.22e-18!79;UBERON:0007798!1.22e-18!79;UBERON:0004290!1.92e-16!70;UBERON:0002385!3.73e-15!63;UBERON:0001015!3.73e-15!63;UBERON:0000383!3.73e-15!63;UBERON:0001981!4.69e-15!60;UBERON:0007500!4.69e-15!60;UBERON:0004537!4.69e-15!60;UBERON:0006965!4.69e-15!60;UBERON:0001134!4.76e-15!61;UBERON:0002036!4.76e-15!61;UBERON:0003082!4.76e-15!61;UBERON:0000055!7.25e-15!69;UBERON:0004573!3.65e-14!33;UBERON:0004571!3.65e-14!33;UBERON:0004872!7.79e-14!84;UBERON:0000486!1.68e-13!82;UBERON:0004535!2.01e-13!110;UBERON:0001009!1.99e-12!113;UBERON:0000490!2.73e-10!138;UBERON:0005256!4.39e-10!143;UBERON:0002100!2.58e-09!216;UBERON:0000947!2.10e-08!21;UBERON:0010191!2.10e-08!21;UBERON:0003914!1.11e-07!118;UBERON:0000475!1.40e-07!365;UBERON:0003102!2.15e-07!95;UBERON:0002199!8.38e-07!45;UBERON:0002416!8.38e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.97e-17;42!UBERON:0003509;4.97e-17;42!UBERON:0004572;4.97e-17;42!UBERON:0004573;1.61e-14;33!UBERON:0004571;1.61e-14;33!UBERON:0007500;3.02e-09;56!UBERON:0001981;3.02e-09;56!UBERON:0004537;3.02e-09;56!UBERON:0000947;6.78e-09;21!UBERON:0010191;6.78e-09;21!UBERON:0001758;4.59e-08;6!UBERON:0003672;4.59e-08;6!UBERON:0000075;7.96e-08;16!UBERON:0000055;5.85e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.85e-23,42;UBERON:0003509,3.85e-23,42;UBERON:0004572,3.85e-23,42;UBERON:0004573,4.22e-16,33;UBERON:0004571,4.22e-16,33;UBERON:0007500,3.31e-15,59;UBERON:0001981,3.31e-15,59;UBERON:0004537,3.31e-15,59;UBERON:0006965,3.31e-15,59;UBERON:0002049,8.57e-14,78;UBERON:0007798,8.57e-14,78;UBERON:0004872,6.15e-13,83;UBERON:0000055,1.29e-12,68;UBERON:0007524,3.11e-10,73;UBERON:0004535,4.83e-10,109;UBERON:0002329,7.14e-10,71;UBERON:0003059,7.14e-10,71;UBERON:0007282,7.14e-10,71;UBERON:0004290,7.14e-10,71;UBERON:0009618,7.14e-10,71;UBERON:0003077,1.34e-09,72;UBERON:0007285,1.34e-09,72;UBERON:0001009,1.95e-09,112;UBERON:0003102,3.34e-09,99;UBERON:0000486,5.15e-09,83;UBERON:0001134,8.15e-09,62;UBERON:0002036,8.15e-09,62;UBERON:0003082,8.15e-09,62;UBERON:0007503,8.26e-09,78;UBERON:0000947,1.11e-08,21;UBERON:0010191,1.11e-08,21;UBERON:0002385,2.79e-08,64;UBERON:0001015,2.79e-08,64;UBERON:0000383,2.79e-08,64;UBERON:0001758,4.38e-08,6;UBERON:0003672,4.38e-08,6;UBERON:0000075,7.43e-08,16;UBERON:0000490,1.55e-07,148;UBERON:0003914,8.12e-07,117;UBERON:0002097,8.35e-07,41;UBERON:0003129,9.62e-07,7 | |||
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| |||
|short_description=p@chr1:68257400..68257442,- | |||
}} |
Revision as of 06:36, 12 September 2013
Short description: | p@chr1:68257400..68257442, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:68257400..68257442, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.20e-23 | 121 |
mesothelial cell | 3.00e-18 | 19 |
fibroblast | 1.77e-17 | 76 |
vascular associated smooth muscle cell | 4.85e-16 | 32 |
smooth muscle cell | 2.05e-14 | 43 |
smooth muscle myoblast | 2.05e-14 | 43 |
lining cell | 2.97e-13 | 58 |
barrier cell | 2.97e-13 | 58 |
embryonic cell | 1.09e-10 | 250 |
muscle cell | 3.52e-10 | 55 |
skin fibroblast | 3.68e-10 | 23 |
muscle precursor cell | 5.17e-10 | 58 |
myoblast | 5.17e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.17e-10 | 58 |
squamous epithelial cell | 1.94e-08 | 63 |
electrically responsive cell | 2.30e-08 | 61 |
electrically active cell | 2.30e-08 | 61 |
fibroblast of periodontium | 4.38e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.