FFCP PHASE1:Hg19::chr1:86043992..86044008,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23576|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2715|TSSclassifier=S|UniProt=Q5HYC8,B4E3V1|association_with_transcript=37bp_to_ENST00000535924,NM_001134445,uc001dlc.2_5end|coexpression_cluster_id=C934|description=CAGE_peak_7_at_DDAH1_5end|id=chr1:86043992..86044008,-|ontology_enrichment_celltype=CL:0000055!5.27e-39!180;CL:0000057!9.49e-23!75;CL:0000680!9.90e-15!57;CL:0000056!9.90e-15!57;CL:0000355!9.90e-15!57;CL:0000187!2.88e-13!54;CL:0000183!3.15e-12!59;CL:0002620!6.39e-11!23;CL:0000393!1.37e-10!60;CL:0000211!1.37e-10!60;CL:0000192!1.88e-10!42;CL:0000514!1.88e-10!42;CL:0000222!2.73e-10!119;CL:0002334!2.11e-08!12;CL:0000359!5.87e-08!32|ontology_enrichment_celltype_v019=CL:0002334;3.50e-11;12!CL:0000187;2.82e-09;55!CL:0000192;4.70e-09;43!CL:0000359;3.34e-08;32!CL:0002620;5.55e-08;23!CL:0000057;6.00e-08;73!CL:0002320;1.18e-07;188!CL:0000393;1.66e-07;61!CL:0000211;1.66e-07;61!CL:0000134;2.37e-07;55!CL:0000048;4.72e-07;58!CL:0000723;7.80e-07;61|ontology_enrichment_celltype_v019_2=CL:0000057,2.73e-21,76;CL:0000680,5.74e-18,58;CL:0000056,5.74e-18,58;CL:0000355,5.74e-18,58;CL:0000048,2.17e-16,427;CL:0000187,5.55e-16,55;CL:0000723,1.49e-15,433;CL:0000034,1.77e-14,441;CL:0000393,3.64e-13,61;CL:0000211,3.64e-13,61;CL:0000192,1.69e-12,43;CL:0000514,1.69e-12,43;CL:0002334,3.16e-11,12;CL:0000222,1.34e-09,121;CL:0000359,4.80e-09,32;CL:0002620,5.88e-08,23|ontology_enrichment_development_v019=CL:0000355;2.49e-09;58!CL:0000514;4.70e-09;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.50e-17!83;UBERON:0002329!1.50e-17!83;UBERON:0003077!1.50e-17!83;UBERON:0003059!1.50e-17!83;UBERON:0007282!1.50e-17!83;UBERON:0009618!1.50e-17!83;UBERON:0007285!1.50e-17!83;UBERON:0004290!3.29e-15!70;UBERON:0000486!5.80e-13!82;UBERON:0001134!6.59e-13!61;UBERON:0002036!6.59e-13!61;UBERON:0003082!6.59e-13!61;UBERON:0002385!1.25e-12!63;UBERON:0001015!1.25e-12!63;UBERON:0000383!1.25e-12!63;UBERON:0005256!1.25e-12!143;UBERON:0000475!3.90e-10!365;UBERON:0002100!6.84e-09!216;UBERON:0004923!3.03e-08!57;UBERON:0004872!3.73e-08!84;UBERON:0000481!1.64e-07!347;UBERON:0002199!1.86e-07!45;UBERON:0002416!1.86e-07!45;UBERON:0003102!2.57e-07!95;UBERON:0003104!6.92e-07!238;UBERON:0009142!6.92e-07!238|ontology_enrichment_uberon_v019=UBERON:0003688;9.58e-08;6!UBERON:0002358;9.58e-08;6!UBERON:0003684;9.58e-08;6!UBERON:0001178;9.58e-08;6!UBERON:0002385;1.95e-07;31!UBERON:0001015;1.95e-07;31!UBERON:0000383;1.95e-07;31!UBERON:0002384;2.96e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.29e-16,73;UBERON:0001134,6.70e-16,62;UBERON:0002036,6.70e-16,62;UBERON:0003082,6.70e-16,62;UBERON:0002329,7.05e-16,71;UBERON:0003059,7.05e-16,71;UBERON:0007282,7.05e-16,71;UBERON:0004290,7.05e-16,71;UBERON:0009618,7.05e-16,71;UBERON:0002385,9.12e-16,64;UBERON:0001015,9.12e-16,64;UBERON:0000383,9.12e-16,64;UBERON:0003077,1.89e-15,72;UBERON:0007285,1.89e-15,72;UBERON:0007503,1.18e-14,78;UBERON:0000486,6.92e-13,83;UBERON:0005256,3.91e-11,122;UBERON:0003104,6.71e-08,160;UBERON:0009142,6.71e-08,160;UBERON:0003688,1.01e-07,6;UBERON:0002358,1.01e-07,6;UBERON:0003684,1.01e-07,6;UBERON:0001178,1.01e-07,6;UBERON:0000490,1.49e-07,148|phase1_expression=8.3572054464456,8.13581990785736,22.6936590594514,6.00439790118782,3.5756887554183,7.85104671690332,2.53299878168311,0,0.783556884599516,0.491467873003018,0,1.31064823278103,1.05506791291381,0.37129905888014,0,1.34465029290355,0,2.19093027116212,1.95173119516203,0.61560529038394,0.612002073732759,1.25381888591235,2.28988789704845,1.23186982565596,5.52387614217132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,8.56679164351653,2.53007406669196,5.0133791063589,6.37324683427624,1.5905718941022,1.94653948121054,0.850813354476611,1.77383517970051,2.98638271356629,0.523916301990851,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.71153252537342,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,15.4061305025549,11.143485026483,7.28250494472703,4.58938593198102,3.54668382198357,7.28880880184999,2.1349799145941,2.4666754841716,4.04574346019696,0.808264032418128,0.163461903113459,0.302714855289863,0,0.234321431833797,0.624320153660641,0.570471821544449,2.24173020827702,0.587172493218824,0.971237666208789,0.561803226808994,0.61246251376468,1.22834317311768,0.619954687054593,5.94001428641027,7.91254173691382,0.910161361938026,1.43723628363248,0.841680569770331,1.37630371859161,2.77064115484183,7.02364193409341,12.5659996277598,5.85928429735728,1.92834711372036,5.56107870635472,10.8914268297469,15.471028784648,3.90118424909723,3.19462840639161,7.72921620136887,11.353128236227,7.42615861861571,4.48210223741514,5.55354303337052,17.673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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2715 | |||
|TSSclassifier=S | |||
|UniProt=Q5HYC8,B4E3V1 | |||
|association_with_transcript=37bp_to_ENST00000535924,NM_001134445,uc001dlc.2_5end | |||
|coexpression_cluster_id=C934 | |||
|description=CAGE_peak_7_at_DDAH1_5end | |||
|id=chr1:86043992..86044008,- | |||
|ontology_enrichment_celltype=CL:0000055!5.27e-39!180;CL:0000057!9.49e-23!75;CL:0000680!9.90e-15!57;CL:0000056!9.90e-15!57;CL:0000355!9.90e-15!57;CL:0000187!2.88e-13!54;CL:0000183!3.15e-12!59;CL:0002620!6.39e-11!23;CL:0000393!1.37e-10!60;CL:0000211!1.37e-10!60;CL:0000192!1.88e-10!42;CL:0000514!1.88e-10!42;CL:0000222!2.73e-10!119;CL:0002334!2.11e-08!12;CL:0000359!5.87e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.50e-11;12!CL:0000187;2.82e-09;55!CL:0000192;4.70e-09;43!CL:0000359;3.34e-08;32!CL:0002620;5.55e-08;23!CL:0000057;6.00e-08;73!CL:0002320;1.18e-07;188!CL:0000393;1.66e-07;61!CL:0000211;1.66e-07;61!CL:0000134;2.37e-07;55!CL:0000048;4.72e-07;58!CL:0000723;7.80e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.73e-21,76;CL:0000680,5.74e-18,58;CL:0000056,5.74e-18,58;CL:0000355,5.74e-18,58;CL:0000048,2.17e-16,427;CL:0000187,5.55e-16,55;CL:0000723,1.49e-15,433;CL:0000034,1.77e-14,441;CL:0000393,3.64e-13,61;CL:0000211,3.64e-13,61;CL:0000192,1.69e-12,43;CL:0000514,1.69e-12,43;CL:0002334,3.16e-11,12;CL:0000222,1.34e-09,121;CL:0000359,4.80e-09,32;CL:0002620,5.88e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000355;2.49e-09;58!CL:0000514;4.70e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.50e-17!83;UBERON:0002329!1.50e-17!83;UBERON:0003077!1.50e-17!83;UBERON:0003059!1.50e-17!83;UBERON:0007282!1.50e-17!83;UBERON:0009618!1.50e-17!83;UBERON:0007285!1.50e-17!83;UBERON:0004290!3.29e-15!70;UBERON:0000486!5.80e-13!82;UBERON:0001134!6.59e-13!61;UBERON:0002036!6.59e-13!61;UBERON:0003082!6.59e-13!61;UBERON:0002385!1.25e-12!63;UBERON:0001015!1.25e-12!63;UBERON:0000383!1.25e-12!63;UBERON:0005256!1.25e-12!143;UBERON:0000475!3.90e-10!365;UBERON:0002100!6.84e-09!216;UBERON:0004923!3.03e-08!57;UBERON:0004872!3.73e-08!84;UBERON:0000481!1.64e-07!347;UBERON:0002199!1.86e-07!45;UBERON:0002416!1.86e-07!45;UBERON:0003102!2.57e-07!95;UBERON:0003104!6.92e-07!238;UBERON:0009142!6.92e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.58e-08;6!UBERON:0002358;9.58e-08;6!UBERON:0003684;9.58e-08;6!UBERON:0001178;9.58e-08;6!UBERON:0002385;1.95e-07;31!UBERON:0001015;1.95e-07;31!UBERON:0000383;1.95e-07;31!UBERON:0002384;2.96e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.29e-16,73;UBERON:0001134,6.70e-16,62;UBERON:0002036,6.70e-16,62;UBERON:0003082,6.70e-16,62;UBERON:0002329,7.05e-16,71;UBERON:0003059,7.05e-16,71;UBERON:0007282,7.05e-16,71;UBERON:0004290,7.05e-16,71;UBERON:0009618,7.05e-16,71;UBERON:0002385,9.12e-16,64;UBERON:0001015,9.12e-16,64;UBERON:0000383,9.12e-16,64;UBERON:0003077,1.89e-15,72;UBERON:0007285,1.89e-15,72;UBERON:0007503,1.18e-14,78;UBERON:0000486,6.92e-13,83;UBERON:0005256,3.91e-11,122;UBERON:0003104,6.71e-08,160;UBERON:0009142,6.71e-08,160;UBERON:0003688,1.01e-07,6;UBERON:0002358,1.01e-07,6;UBERON:0003684,1.01e-07,6;UBERON:0001178,1.01e-07,6;UBERON:0000490,1.49e-07,148 | |||
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| |||
|short_description=p7@DDAH1 | |||
}} |
Revision as of 06:59, 12 September 2013
Short description: | p7@DDAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_DDAH1_5end |
Coexpression cluster: | C934_basal_Preadipocyte_Adipocyte_Fibroblast_Mesenchymal_spindle_Myoblast |
Association with transcript: | 37bp_to_ENST00000535924, NM_001134445, uc001dlc.2_5end |
EntrezGene: | DDAH1 |
HGNC: | 2715 |
UniProt: | Q5HYC8B4E3V1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.73e-21 | 76 |
muscle precursor cell | 5.74e-18 | 58 |
myoblast | 5.74e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.74e-18 | 58 |
multi fate stem cell | 2.17e-16 | 427 |
muscle cell | 5.55e-16 | 55 |
somatic stem cell | 1.49e-15 | 433 |
stem cell | 1.77e-14 | 441 |
electrically responsive cell | 3.64e-13 | 61 |
electrically active cell | 3.64e-13 | 61 |
smooth muscle cell | 1.69e-12 | 43 |
smooth muscle myoblast | 1.69e-12 | 43 |
preadipocyte | 3.16e-11 | 12 |
mesodermal cell | 1.34e-09 | 121 |
vascular associated smooth muscle cell | 4.80e-09 | 32 |
skin fibroblast | 5.88e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.29e-16 | 73 |
skeletal muscle tissue | 6.70e-16 | 62 |
striated muscle tissue | 6.70e-16 | 62 |
myotome | 6.70e-16 | 62 |
somite | 7.05e-16 | 71 |
presomitic mesoderm | 7.05e-16 | 71 |
presumptive segmental plate | 7.05e-16 | 71 |
dermomyotome | 7.05e-16 | 71 |
trunk paraxial mesoderm | 7.05e-16 | 71 |
muscle tissue | 9.12e-16 | 64 |
musculature | 9.12e-16 | 64 |
musculature of body | 9.12e-16 | 64 |
paraxial mesoderm | 1.89e-15 | 72 |
presumptive paraxial mesoderm | 1.89e-15 | 72 |
epithelial vesicle | 1.18e-14 | 78 |
multilaminar epithelium | 6.92e-13 | 83 |
trunk mesenchyme | 3.91e-11 | 122 |
mesenchyme | 6.71e-08 | 160 |
entire embryonic mesenchyme | 6.71e-08 | 160 |
omentum | 1.01e-07 | 6 |
peritoneum | 1.01e-07 | 6 |
abdominal cavity | 1.01e-07 | 6 |
visceral peritoneum | 1.01e-07 | 6 |
unilaminar epithelium | 1.49e-07 | 148 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.