FFCP PHASE1:Hg19::chr1:154943212..154943230,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |||
|TSSclassifier=S | |||
|UniProt=B4DL02,P29353 | |||
|association_with_transcript=0bp_to_ENST00000368443,ENST00000368445,ENST00000368449,ENST00000448116,NM_001130040,NM_183001,uc001ffv.2,uc001ffw.2_5end | |||
|coexpression_cluster_id=C2529 | |||
|description=CAGE_peak_1_at_SHC1_5end | |||
|id=chr1:154943212..154943230,- | |||
|ontology_enrichment_celltype=CL:0002321!1.06e-35!248;CL:0000220!1.23e-35!246;CL:0000055!1.55e-30!180;CL:0000222!3.45e-24!119;CL:0000183!4.79e-17!59;CL:0000680!4.12e-15!57;CL:0000056!4.12e-15!57;CL:0000355!4.12e-15!57;CL:0000187!1.20e-14!54;CL:0000066!7.66e-14!254;CL:0000057!8.26e-14!75;CL:0000393!7.14e-13!60;CL:0000211!7.14e-13!60;CL:0000548!2.02e-12!679;CL:0000004!2.02e-12!679;CL:0000255!2.02e-12!679;CL:0000192!2.69e-12!42;CL:0000514!2.69e-12!42;CL:0000144!1.03e-11!625;CL:0000012!1.07e-11!682;CL:0002371!6.18e-10!591;CL:0000213!1.73e-09!57;CL:0000215!1.73e-09!57;CL:0000359!1.95e-09!32;CL:0000076!1.04e-07!62;CL:0000221!1.11e-07!71;CL:0002078!3.22e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.88e-09;43!CL:0000359;5.28e-09;32!CL:0000187;7.38e-09;55!CL:0000393;4.12e-07;61!CL:0000211;4.12e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.36e-36,250;CL:0000222,4.11e-25,121;CL:0000680,1.75e-15,58;CL:0000056,1.75e-15,58;CL:0000355,1.75e-15,58;CL:0000187,5.13e-15,55;CL:0000057,3.67e-14,76;CL:0000066,2.75e-13,253;CL:0000393,3.17e-13,61;CL:0000211,3.17e-13,61;CL:0000192,1.19e-12,43;CL:0000514,1.19e-12,43;CL:0000213,6.24e-10,58;CL:0000215,6.24e-10,58;CL:0000359,1.79e-09,32;CL:0000221,4.18e-08,72;CL:0000076,5.53e-08,63;CL:0002078,1.22e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;2.88e-09;43!CL:0000355;8.96e-09;58!CL:0000222;1.02e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@SHC1 | |||
}} |
Revision as of 00:41, 12 September 2013
Short description: | p1@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SHC1_5end |
Coexpression cluster: | C2529_Mesenchymal_Corneal_Urothelial_Cardiac_salivary_Sebocyte_Esophageal |
Association with transcript: | 0bp_to_ENST00000368443, ENST00000368445, ENST00000368449, ENST00000448116, NM_001130040, NM_183001, uc001ffv.2, uc001ffw.2_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | B4DL02P29353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.36e-36 | 250 |
mesodermal cell | 4.11e-25 | 121 |
muscle precursor cell | 1.75e-15 | 58 |
myoblast | 1.75e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-15 | 58 |
muscle cell | 5.13e-15 | 55 |
fibroblast | 3.67e-14 | 76 |
epithelial cell | 2.75e-13 | 253 |
electrically responsive cell | 3.17e-13 | 61 |
electrically active cell | 3.17e-13 | 61 |
smooth muscle cell | 1.19e-12 | 43 |
smooth muscle myoblast | 1.19e-12 | 43 |
lining cell | 6.24e-10 | 58 |
barrier cell | 6.24e-10 | 58 |
vascular associated smooth muscle cell | 1.79e-09 | 32 |
ectodermal cell | 4.18e-08 | 72 |
squamous epithelial cell | 5.53e-08 | 63 |
meso-epithelial cell | 1.22e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.