FFCP PHASE1:Hg19::chr1:170633410..170633422,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=P54821|association_with_transcript=0bp_to_M95929_5end|coexpression_cluster_id=C851|description=CAGE_peak_2_at_M95929_5end|id=chr1:170633410..170633422,+|ontology_enrichment_celltype=CL:0000055!4.09e-35!180;CL:0000057!2.63e-23!75;CL:0000680!1.04e-13!57;CL:0000056!1.04e-13!57;CL:0000355!1.04e-13!57;CL:0002620!2.08e-13!23;CL:0000187!4.98e-13!54;CL:0000183!4.99e-12!59;CL:0000393!3.96e-10!60;CL:0000211!3.96e-10!60;CL:0000192!8.71e-09!42;CL:0000514!8.71e-09!42;CL:0002334!1.92e-07!12;CL:0000359!3.71e-07!32|ontology_enrichment_celltype_v019=CL:0002620;1.26e-14;23!CL:0000057;3.13e-11;73!CL:0002334;2.67e-08;12!CL:0002556;2.59e-07;6!CL:0002539;3.09e-07;10!CL:0002320;1.00e-06;188|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-26,76;CL:0002620,4.28e-15,23;CL:0000048,1.13e-09,427;CL:0000187,2.33e-09,55;CL:0000680,3.85e-09,58;CL:0000056,3.85e-09,58;CL:0000355,3.85e-09,58;CL:0000723,4.73e-09,433;CL:0002334,2.43e-08,12;CL:0000034,2.90e-08,441;CL:0000393,1.54e-07,61;CL:0000211,1.54e-07,61;CL:0002556,2.49e-07,6;CL:0002539,3.14e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.15e-22!83;UBERON:0002329!1.15e-22!83;UBERON:0003077!1.15e-22!83;UBERON:0003059!1.15e-22!83;UBERON:0007282!1.15e-22!83;UBERON:0009618!1.15e-22!83;UBERON:0007285!1.15e-22!83;UBERON:0004290!3.39e-19!70;UBERON:0002385!1.45e-15!63;UBERON:0001015!1.45e-15!63;UBERON:0000383!1.45e-15!63;UBERON:0001134!1.88e-15!61;UBERON:0002036!1.88e-15!61;UBERON:0003082!1.88e-15!61;UBERON:0000486!2.31e-15!82;UBERON:0000475!1.17e-14!365;UBERON:0003102!6.61e-12!95;UBERON:0005256!1.20e-09!143;UBERON:0002199!1.61e-09!45;UBERON:0002416!1.61e-09!45;UBERON:0002097!2.65e-09!40;UBERON:0007023!8.82e-09!115;UBERON:0000481!4.47e-08!347;UBERON:0000479!9.02e-08!787;UBERON:0000468!9.65e-08!659|ontology_enrichment_uberon_v019=UBERON:0002385;4.27e-09;31!UBERON:0001015;4.27e-09;31!UBERON:0000383;4.27e-09;31!UBERON:0002204;8.77e-09;70!UBERON:0002384;1.68e-08;198!UBERON:0007100;5.93e-08;25!UBERON:0000948;1.00e-07;22!UBERON:0002097;2.10e-07;41!UBERON:0001758;2.59e-07;6!UBERON:0003672;2.59e-07;6!UBERON:0004237;3.09e-07;10!UBERON:0004695;3.09e-07;10!UBERON:0002111;3.09e-07;10!UBERON:0004178;3.09e-07;10!UBERON:0000075;3.70e-07;16!UBERON:0002199;6.07e-07;46!UBERON:0002416;6.07e-07;46!UBERON:0001434;6.15e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.29e-15,73;UBERON:0002329,1.09e-14,71;UBERON:0003059,1.09e-14,71;UBERON:0007282,1.09e-14,71;UBERON:0004290,1.09e-14,71;UBERON:0009618,1.09e-14,71;UBERON:0003077,2.77e-14,72;UBERON:0007285,2.77e-14,72;UBERON:0003102,4.78e-13,99;UBERON:0007503,4.12e-12,78;UBERON:0000486,4.25e-12,83;UBERON:0001134,2.03e-10,62;UBERON:0002036,2.03e-10,62;UBERON:0003082,2.03e-10,62;UBERON:0002199,3.14e-10,46;UBERON:0002416,3.14e-10,46;UBERON:0002097,3.19e-10,41;UBERON:0002385,9.35e-10,64;UBERON:0001015,9.35e-10,64;UBERON:0000383,9.35e-10,64;UBERON:0001758,2.49e-07,6;UBERON:0003672,2.49e-07,6;UBERON:0005256,2.65e-07,122;UBERON:0004237,3.14e-07,10;UBERON:0004695,3.14e-07,10;UBERON:0002111,3.14e-07,10;UBERON:0004178,3.14e-07,10;UBERON:0003104,4.77e-07,160;UBERON:0009142,4.77e-07,160;UBERON:0000075,5.45e-07,16;UBERON:0007100,6.40e-07,27;UBERON:0002067,8.81e-07,9;UBERON:0004016,8.81e-07,9;UBERON:0010083,8.81e-07,9|phase1_expression=1.45342703416445,0.856402095563933,0.704772020479856,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0.783556884599516,0.245733936501509,0,0,0,1.23766352960047,1.32558950291166,8.74022690387308,6.02694528023977,7.30310090387373,6.8310591830671,0,1.22400414746552,0,1.14494394852423,1.36874425072884,0.502170558379211,0.152826811495903,0.0821005894499457,0.393553906568396,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.895037932904712,2.1686349143074,3.50936537445123,1.30361867064741,4.7717156823066,2.43317435151318,0.0945348171640679,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,2.58070378531837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,6.20489507156441,0.926864265692532,1.72101972449288,6.02936249737207,1.68203280042692,0,1.2333377420858,2.8008993185979,1.0776853765575,1.30769522490767,0.151357427644931,0,2.10889288650417,5.61888138294577,3.99330275081114,5.97794722207204,1.52664848236894,2.5899671098901,2.24721290723598,4.28723759635276,3.93069815397658,4.44300859055791,7.12801714369232,7.66527480763526,0,0,3.03005005117319,2.75260743718321,6.37247465613621,7.46261955497424,8.88814607817157,8.26309323986282,0.567160915800105,2.33206526395521,3.41691822109708,2.96704661623387,0.900273288253207,3.60683852334536,2.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=P54821 | |||
|association_with_transcript=0bp_to_M95929_5end | |||
|coexpression_cluster_id=C851 | |||
|description=CAGE_peak_2_at_M95929_5end | |||
|id=chr1:170633410..170633422,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.09e-35!180;CL:0000057!2.63e-23!75;CL:0000680!1.04e-13!57;CL:0000056!1.04e-13!57;CL:0000355!1.04e-13!57;CL:0002620!2.08e-13!23;CL:0000187!4.98e-13!54;CL:0000183!4.99e-12!59;CL:0000393!3.96e-10!60;CL:0000211!3.96e-10!60;CL:0000192!8.71e-09!42;CL:0000514!8.71e-09!42;CL:0002334!1.92e-07!12;CL:0000359!3.71e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.26e-14;23!CL:0000057;3.13e-11;73!CL:0002334;2.67e-08;12!CL:0002556;2.59e-07;6!CL:0002539;3.09e-07;10!CL:0002320;1.00e-06;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-26,76;CL:0002620,4.28e-15,23;CL:0000048,1.13e-09,427;CL:0000187,2.33e-09,55;CL:0000680,3.85e-09,58;CL:0000056,3.85e-09,58;CL:0000355,3.85e-09,58;CL:0000723,4.73e-09,433;CL:0002334,2.43e-08,12;CL:0000034,2.90e-08,441;CL:0000393,1.54e-07,61;CL:0000211,1.54e-07,61;CL:0002556,2.49e-07,6;CL:0002539,3.14e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.15e-22!83;UBERON:0002329!1.15e-22!83;UBERON:0003077!1.15e-22!83;UBERON:0003059!1.15e-22!83;UBERON:0007282!1.15e-22!83;UBERON:0009618!1.15e-22!83;UBERON:0007285!1.15e-22!83;UBERON:0004290!3.39e-19!70;UBERON:0002385!1.45e-15!63;UBERON:0001015!1.45e-15!63;UBERON:0000383!1.45e-15!63;UBERON:0001134!1.88e-15!61;UBERON:0002036!1.88e-15!61;UBERON:0003082!1.88e-15!61;UBERON:0000486!2.31e-15!82;UBERON:0000475!1.17e-14!365;UBERON:0003102!6.61e-12!95;UBERON:0005256!1.20e-09!143;UBERON:0002199!1.61e-09!45;UBERON:0002416!1.61e-09!45;UBERON:0002097!2.65e-09!40;UBERON:0007023!8.82e-09!115;UBERON:0000481!4.47e-08!347;UBERON:0000479!9.02e-08!787;UBERON:0000468!9.65e-08!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.27e-09;31!UBERON:0001015;4.27e-09;31!UBERON:0000383;4.27e-09;31!UBERON:0002204;8.77e-09;70!UBERON:0002384;1.68e-08;198!UBERON:0007100;5.93e-08;25!UBERON:0000948;1.00e-07;22!UBERON:0002097;2.10e-07;41!UBERON:0001758;2.59e-07;6!UBERON:0003672;2.59e-07;6!UBERON:0004237;3.09e-07;10!UBERON:0004695;3.09e-07;10!UBERON:0002111;3.09e-07;10!UBERON:0004178;3.09e-07;10!UBERON:0000075;3.70e-07;16!UBERON:0002199;6.07e-07;46!UBERON:0002416;6.07e-07;46!UBERON:0001434;6.15e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.29e-15,73;UBERON:0002329,1.09e-14,71;UBERON:0003059,1.09e-14,71;UBERON:0007282,1.09e-14,71;UBERON:0004290,1.09e-14,71;UBERON:0009618,1.09e-14,71;UBERON:0003077,2.77e-14,72;UBERON:0007285,2.77e-14,72;UBERON:0003102,4.78e-13,99;UBERON:0007503,4.12e-12,78;UBERON:0000486,4.25e-12,83;UBERON:0001134,2.03e-10,62;UBERON:0002036,2.03e-10,62;UBERON:0003082,2.03e-10,62;UBERON:0002199,3.14e-10,46;UBERON:0002416,3.14e-10,46;UBERON:0002097,3.19e-10,41;UBERON:0002385,9.35e-10,64;UBERON:0001015,9.35e-10,64;UBERON:0000383,9.35e-10,64;UBERON:0001758,2.49e-07,6;UBERON:0003672,2.49e-07,6;UBERON:0005256,2.65e-07,122;UBERON:0004237,3.14e-07,10;UBERON:0004695,3.14e-07,10;UBERON:0002111,3.14e-07,10;UBERON:0004178,3.14e-07,10;UBERON:0003104,4.77e-07,160;UBERON:0009142,4.77e-07,160;UBERON:0000075,5.45e-07,16;UBERON:0007100,6.40e-07,27;UBERON:0002067,8.81e-07,9;UBERON:0004016,8.81e-07,9;UBERON:0010083,8.81e-07,9 | |||
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| |||
|short_description=p2@M95929 | |||
}} |
Revision as of 01:42, 12 September 2013
Short description: | p2@M95929 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_M95929_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | 0bp_to_M95929_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-26 | 76 |
skin fibroblast | 4.28e-15 | 23 |
multi fate stem cell | 1.13e-09 | 427 |
muscle cell | 2.33e-09 | 55 |
muscle precursor cell | 3.85e-09 | 58 |
myoblast | 3.85e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.85e-09 | 58 |
somatic stem cell | 4.73e-09 | 433 |
preadipocyte | 2.43e-08 | 12 |
stem cell | 2.90e-08 | 441 |
electrically responsive cell | 1.54e-07 | 61 |
electrically active cell | 1.54e-07 | 61 |
fibroblast of periodontium | 2.49e-07 | 6 |
aortic smooth muscle cell | 3.14e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.29e-15 | 73 |
somite | 1.09e-14 | 71 |
presomitic mesoderm | 1.09e-14 | 71 |
presumptive segmental plate | 1.09e-14 | 71 |
dermomyotome | 1.09e-14 | 71 |
trunk paraxial mesoderm | 1.09e-14 | 71 |
paraxial mesoderm | 2.77e-14 | 72 |
presumptive paraxial mesoderm | 2.77e-14 | 72 |
surface structure | 4.78e-13 | 99 |
epithelial vesicle | 4.12e-12 | 78 |
multilaminar epithelium | 4.25e-12 | 83 |
skeletal muscle tissue | 2.03e-10 | 62 |
striated muscle tissue | 2.03e-10 | 62 |
myotome | 2.03e-10 | 62 |
integument | 3.14e-10 | 46 |
integumental system | 3.14e-10 | 46 |
skin of body | 3.19e-10 | 41 |
muscle tissue | 9.35e-10 | 64 |
musculature | 9.35e-10 | 64 |
musculature of body | 9.35e-10 | 64 |
periodontium | 2.49e-07 | 6 |
dentition | 2.49e-07 | 6 |
trunk mesenchyme | 2.65e-07 | 122 |
blood vessel smooth muscle | 3.14e-07 | 10 |
arterial system smooth muscle | 3.14e-07 | 10 |
artery smooth muscle tissue | 3.14e-07 | 10 |
aorta smooth muscle tissue | 3.14e-07 | 10 |
mesenchyme | 4.77e-07 | 160 |
entire embryonic mesenchyme | 4.77e-07 | 160 |
subdivision of skeletal system | 5.45e-07 | 16 |
primary circulatory organ | 6.40e-07 | 27 |
dermis | 8.81e-07 | 9 |
dermatome | 8.81e-07 | 9 |
future dermis | 8.81e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.