FFCP PHASE1:Hg19::chr11:78127822..78127826,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C407|description=CAGE_peak_at_chr11:78127822..78127826,-|id=chr11:78127822..78127826,-|ontology_enrichment_celltype=CL:0000766!7.28e-29!76;CL:0002057!2.27e-26!42;CL:0000763!1.48e-25!112;CL:0000049!1.48e-25!112;CL:0000037!2.20e-25!172;CL:0000566!2.20e-25!172;CL:0000738!5.06e-25!140;CL:0000557!2.37e-23!71;CL:0000860!5.32e-23!45;CL:0000988!7.77e-23!182;CL:0002032!5.48e-22!165;CL:0000837!5.48e-22!165;CL:0000839!8.06e-22!70;CL:0002009!1.55e-21!65;CL:0002194!9.50e-21!63;CL:0000576!9.50e-21!63;CL:0000040!9.50e-21!63;CL:0000559!9.50e-21!63;CL:0002031!2.09e-17!124;CL:0002087!4.32e-17!119;CL:0002393!3.89e-08!9;CL:0002397!3.89e-08!9;CL:0000094!2.46e-07!8|ontology_enrichment_celltype_v019=CL:0000576;6.14e-32;48!CL:0000860;6.58e-31;33!CL:0002057;6.58e-31;33!CL:0000766;4.29e-28;69!CL:0000473;1.85e-25;39!CL:0000234;1.85e-25;39!CL:0000094;2.95e-16;8!CL:0000763;2.56e-14;100!CL:0002393;3.91e-13;6!CL:0002397;3.91e-13;6!CL:0000738;1.69e-11;136!CL:0000081;2.50e-11;11!CL:0002087;3.29e-11;104!CL:0000775;9.65e-08;3!CL:0000226;2.55e-07;3!CL:0000842;2.55e-07;3!CL:0000988;4.35e-07;177!CL:0000875;4.54e-07;3!CL:0002396;4.54e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,1.29e-66,72;CL:0000557,9.15e-52,67;CL:0000860,3.54e-51,42;CL:0002057,3.54e-51,42;CL:0000839,2.53e-50,66;CL:0000763,4.74e-50,108;CL:0000049,4.74e-50,108;CL:0000473,2.01e-48,48;CL:0000234,2.01e-48,48;CL:0002009,2.43e-48,61;CL:0000738,4.57e-48,136;CL:0002194,6.50e-48,59;CL:0000576,6.50e-48,59;CL:0000040,6.50e-48,59;CL:0000559,6.50e-48,59;CL:0000037,7.79e-44,168;CL:0000988,1.44e-40,177;CL:0002032,1.57e-38,161;CL:0000837,1.57e-38,161;CL:0002031,7.87e-34,120;CL:0002087,1.20e-33,115;CL:0002393,1.31e-18,9;CL:0002397,1.31e-18,9;CL:0000094,1.55e-16,8;CL:0000134,1.02e-11,354;CL:0000081,1.59e-11,11;CL:0002320,3.94e-11,361;CL:0000219,4.28e-09,386;CL:0000775,9.78e-08,3;CL:0000048,1.63e-07,427;CL:0000226,2.94e-07,3;CL:0000842,2.94e-07,3;CL:0000034,3.42e-07,441;CL:0000723,3.62e-07,433;CL:0000875,4.59e-07,3;CL:0002396,4.59e-07,3|ontology_enrichment_development_v019=CL:0002057;1.87e-34;42!CL:0000049;1.33e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.40e-28!102;UBERON:0003061!1.40e-28!102;UBERON:0002193!2.36e-26!112;UBERON:0002371!2.15e-20!80;UBERON:0001474!2.04e-19!86;UBERON:0004765!1.62e-14!101;UBERON:0001434!1.62e-14!101;UBERON:0002405!1.15e-13!115;UBERON:0003081!1.34e-09!216;UBERON:0007023!1.66e-08!115;UBERON:0000178!3.40e-08!15;UBERON:0000179!3.40e-08!15;UBERON:0000463!3.40e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-14;15!UBERON:0000179;2.03e-14;15!UBERON:0000463;2.03e-14;15!UBERON:0002390;1.79e-08;32!UBERON:0002298;4.25e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-58,98;UBERON:0003061,1.32e-58,98;UBERON:0002193,1.55e-51,108;UBERON:0002371,5.32e-46,76;UBERON:0001474,1.37e-41,82;UBERON:0002405,2.44e-38,93;UBERON:0004765,1.26e-36,90;UBERON:0001434,1.51e-31,100;UBERON:0003081,6.05e-23,203;UBERON:0000178,2.03e-14,15;UBERON:0000179,2.03e-14,15;UBERON:0000463,2.03e-14,15;UBERON:0002204,3.02e-14,167;UBERON:0002384,7.27e-11,371;UBERON:0000926,2.21e-09,315;UBERON:0004120,2.21e-09,315;UBERON:0006603,2.21e-09,315;UBERON:0002298,8.10e-07,6|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.502170558379211,0.0764134057479513,0,0.0787107813136792,5.11373559903575,1.91914699048606,1.54816123316076,0,0,0,0.154934401160603,0,1.17440175733939,17.1738576644882,15.4419224552009,12.1526087600877,2.23915474239924,1.29557466407592,1.03030227053675,1.74477886535478,3.02300754951048,1.21292030593908,2.55671940596253,0.411167888021826,3.09706370895104,1.7261543539329,0.256160706529101,0.47296445977717,6.55016793399575,3.87290810150296,2.70852973188684,2.44715041405386,0.272906150057846,1.57306439111559,5.20342617030534,1.60464513538047,4.47535988059329,0.989553900560148,0.598390972864896,1.27867425159808,5.80418477257168,2.8369261234557,5.60540024096017,2.76373531782418,1.0429658368404,0.65156653411535,2.42159801053347,2.57794345191295,1.89877432464531,3.80259515361495,2.97646019951061,3.77385561915077,8.08766144254765,6.45760639218477,4.17886525412408,3.13514018115373,4.57508357557907,2.55729815270488,0,0,1.77901850772711,1.70692089026603,0,0,0,0,1.1384259382189,2.93618594685469,0.382273228125229,0,2.80254281490768,0.263384084775077,0,1.96505381374582,0.616804496998528,0.334372990781356,0,0,0,0.557052284425868,0,0.221533894583621,0.270803863765016,0.512365278902701,0.390178042679635,0.657751618414705,0.829050053357545,1.15921234294021,0,0,0,1.0197840842781,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0,1.20964045934839,1.33720097891754,0.144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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr11:78127822..78127826,- | |||
|id=chr11:78127822..78127826,- | |||
|ontology_enrichment_celltype=CL:0000766!7.28e-29!76;CL:0002057!2.27e-26!42;CL:0000763!1.48e-25!112;CL:0000049!1.48e-25!112;CL:0000037!2.20e-25!172;CL:0000566!2.20e-25!172;CL:0000738!5.06e-25!140;CL:0000557!2.37e-23!71;CL:0000860!5.32e-23!45;CL:0000988!7.77e-23!182;CL:0002032!5.48e-22!165;CL:0000837!5.48e-22!165;CL:0000839!8.06e-22!70;CL:0002009!1.55e-21!65;CL:0002194!9.50e-21!63;CL:0000576!9.50e-21!63;CL:0000040!9.50e-21!63;CL:0000559!9.50e-21!63;CL:0002031!2.09e-17!124;CL:0002087!4.32e-17!119;CL:0002393!3.89e-08!9;CL:0002397!3.89e-08!9;CL:0000094!2.46e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;6.14e-32;48!CL:0000860;6.58e-31;33!CL:0002057;6.58e-31;33!CL:0000766;4.29e-28;69!CL:0000473;1.85e-25;39!CL:0000234;1.85e-25;39!CL:0000094;2.95e-16;8!CL:0000763;2.56e-14;100!CL:0002393;3.91e-13;6!CL:0002397;3.91e-13;6!CL:0000738;1.69e-11;136!CL:0000081;2.50e-11;11!CL:0002087;3.29e-11;104!CL:0000775;9.65e-08;3!CL:0000226;2.55e-07;3!CL:0000842;2.55e-07;3!CL:0000988;4.35e-07;177!CL:0000875;4.54e-07;3!CL:0002396;4.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.29e-66,72;CL:0000557,9.15e-52,67;CL:0000860,3.54e-51,42;CL:0002057,3.54e-51,42;CL:0000839,2.53e-50,66;CL:0000763,4.74e-50,108;CL:0000049,4.74e-50,108;CL:0000473,2.01e-48,48;CL:0000234,2.01e-48,48;CL:0002009,2.43e-48,61;CL:0000738,4.57e-48,136;CL:0002194,6.50e-48,59;CL:0000576,6.50e-48,59;CL:0000040,6.50e-48,59;CL:0000559,6.50e-48,59;CL:0000037,7.79e-44,168;CL:0000988,1.44e-40,177;CL:0002032,1.57e-38,161;CL:0000837,1.57e-38,161;CL:0002031,7.87e-34,120;CL:0002087,1.20e-33,115;CL:0002393,1.31e-18,9;CL:0002397,1.31e-18,9;CL:0000094,1.55e-16,8;CL:0000134,1.02e-11,354;CL:0000081,1.59e-11,11;CL:0002320,3.94e-11,361;CL:0000219,4.28e-09,386;CL:0000775,9.78e-08,3;CL:0000048,1.63e-07,427;CL:0000226,2.94e-07,3;CL:0000842,2.94e-07,3;CL:0000034,3.42e-07,441;CL:0000723,3.62e-07,433;CL:0000875,4.59e-07,3;CL:0002396,4.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-34;42!CL:0000049;1.33e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.40e-28!102;UBERON:0003061!1.40e-28!102;UBERON:0002193!2.36e-26!112;UBERON:0002371!2.15e-20!80;UBERON:0001474!2.04e-19!86;UBERON:0004765!1.62e-14!101;UBERON:0001434!1.62e-14!101;UBERON:0002405!1.15e-13!115;UBERON:0003081!1.34e-09!216;UBERON:0007023!1.66e-08!115;UBERON:0000178!3.40e-08!15;UBERON:0000179!3.40e-08!15;UBERON:0000463!3.40e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-14;15!UBERON:0000179;2.03e-14;15!UBERON:0000463;2.03e-14;15!UBERON:0002390;1.79e-08;32!UBERON:0002298;4.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-58,98;UBERON:0003061,1.32e-58,98;UBERON:0002193,1.55e-51,108;UBERON:0002371,5.32e-46,76;UBERON:0001474,1.37e-41,82;UBERON:0002405,2.44e-38,93;UBERON:0004765,1.26e-36,90;UBERON:0001434,1.51e-31,100;UBERON:0003081,6.05e-23,203;UBERON:0000178,2.03e-14,15;UBERON:0000179,2.03e-14,15;UBERON:0000463,2.03e-14,15;UBERON:0002204,3.02e-14,167;UBERON:0002384,7.27e-11,371;UBERON:0000926,2.21e-09,315;UBERON:0004120,2.21e-09,315;UBERON:0006603,2.21e-09,315;UBERON:0002298,8.10e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.502170558379211,0.0764134057479513,0,0.0787107813136792,5.11373559903575,1.91914699048606,1.54816123316076,0,0,0,0.154934401160603,0,1.17440175733939,17.1738576644882,15.4419224552009,12.1526087600877,2.23915474239924,1.29557466407592,1.03030227053675,1.74477886535478,3.02300754951048,1.21292030593908,2.55671940596253,0.411167888021826,3.09706370895104,1.7261543539329,0.256160706529101,0.47296445977717,6.55016793399575,3.87290810150296,2.70852973188684,2.44715041405386,0.272906150057846,1.57306439111559,5.20342617030534,1.60464513538047,4.47535988059329,0.989553900560148,0.598390972864896,1.27867425159808,5.80418477257168,2.8369261234557,5.60540024096017,2.76373531782418,1.0429658368404,0.65156653411535,2.42159801053347,2.57794345191295,1.89877432464531,3.80259515361495,2.97646019951061,3.77385561915077,8.08766144254765,6.45760639218477,4.17886525412408,3.13514018115373,4.57508357557907,2.55729815270488,0,0,1.77901850772711,1.70692089026603,0,0,0,0,1.1384259382189,2.93618594685469,0.382273228125229,0,2.80254281490768,0.263384084775077,0,1.96505381374582,0.616804496998528,0.334372990781356,0,0,0,0.557052284425868,0,0.221533894583621,0.270803863765016,0.512365278902701,0.390178042679635,0.657751618414705,0.829050053357545,1.15921234294021,0,0,0,1.0197840842781,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0,1.20964045934839,1.33720097891754,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.851363990735132,0,0,0.649094787309367,0.696518949197069,1.32957960518865,4.29283123749616,0.571994910780128,2.60020250930695,0.79504962946682,0,0.347140501607594,0.56530794192401,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0.357198913136319,0.673588117878509,0.337834441449967,0,0,0.366403487860815,5.27121669744253,7.75560528296651,0,0.993943903390637,0.12663051166458,0.397227542439656,0.860509862246441,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0,0.89694817844431,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0.761016608938393,0,0,1.47730203652438,0,0.445893486866185,0,0,0,0,0,0,0.985326475791887,1.40877494421162,1.65862492432618,1.15295962733569,1.00993946741104,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0.560425719967636,0.591092280605782,1.94064817373566,0.898401253958239,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,14.2311334549965,11.966458368161,13.2612964299531,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,6.82334486205528,8.19713963110744,2.13455115606889,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0.580066775656914,0,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.847294206991012,0,0,0,0,2.53723804616085,0.764637207142375,5.12682468456746,1.66762242820452,1.23408681925858,2.59389324477087,3.7802200606668,3.96562588147135,0,1.92495971052672,0.245040215981032,0.185803175125719,0.432807638929335,0.213425530045242,0,0,0.383010740264733,0.635020748171649,0.649243880549111,0.561594356226918,0.456469358066384,0,2.50634477090067,0.169291777801603,1.605880751037,1.81619736471943,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0.556812347790485,1.23087398947712,0,0,0,0,1.17206543417515,0.242721043499027,0.891547074219827,0,0,0.296964680832639,0,0,0.703347082052564,0.222617410045812,0,0.63337622438398,1.19548792950642,0.276283915531148,0,0.102268682502155,0.492339221844278,0,0.0898683511473268,0.537063524026827,1.53471711068062,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.723578631752448,0,0,0,0,0.108938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| |||
|short_description=p@chr11:78127822..78127826,- | |||
}} |
Revision as of 19:50, 10 September 2013
Short description: | p@chr11:78127822..78127826, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:78127822..78127826, - |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.32e-58 | 98 |
blood island | 1.32e-58 | 98 |
hemolymphoid system | 1.55e-51 | 108 |
bone marrow | 5.32e-46 | 76 |
bone element | 1.37e-41 | 82 |
immune system | 2.44e-38 | 93 |
skeletal element | 1.26e-36 | 90 |
skeletal system | 1.51e-31 | 100 |
lateral plate mesoderm | 6.05e-23 | 203 |
blood | 2.03e-14 | 15 |
haemolymphatic fluid | 2.03e-14 | 15 |
organism substance | 2.03e-14 | 15 |
musculoskeletal system | 3.02e-14 | 167 |
connective tissue | 7.27e-11 | 371 |
mesoderm | 2.21e-09 | 315 |
mesoderm-derived structure | 2.21e-09 | 315 |
presumptive mesoderm | 2.21e-09 | 315 |
brainstem | 8.10e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.