FFCP PHASE1:Hg19::chr13:50834337..50834341,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:50834337..50834341,+|id=chr13:50834337..50834341,+|ontology_enrichment_celltype=CL:0000223!2.64e-09!59|ontology_enrichment_celltype_v019=CL:0000047;6.17e-09;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1|ontology_enrichment_disease=DOID:305!2.43e-22!106;DOID:162!2.33e-20!235;DOID:0050687!3.83e-20!143;DOID:14566!2.16e-19!239;DOID:0050686!2.77e-10!137;DOID:1749!7.44e-09!14;DOID:7!1.17e-07!39;DOID:1036!8.53e-07!8|ontology_enrichment_disease_v019=DOID:1799;1.53e-16;1!DOID:10165;1.53e-16;1!DOID:1798;1.53e-16;1!DOID:1325;1.18e-09;7!DOID:3904;1.18e-09;7!DOID:3910;6.17e-09;2!DOID:3905;1.05e-07;9!DOID:305;5.48e-07;106|ontology_enrichment_disease_v019_2=DOID:1799,2.63e-16,1;DOID:10165,2.63e-16,1;DOID:1798,2.63e-16,1;DOID:305,7.34e-11,106;DOID:1325,9.52e-10,7;DOID:3904,9.52e-10,7;DOID:3910,5.94e-09,2;DOID:0050687,7.96e-08,143;DOID:3905,8.90e-08,9|ontology_enrichment_uberon=UBERON:0002294!9.51e-08!7;UBERON:0001173!9.51e-08!7;UBERON:0004912!9.51e-08!7;UBERON:0009497!1.03e-07!25;UBERON:0000015!1.03e-07!25;UBERON:0002423!1.03e-07!25;UBERON:0006235!1.03e-07!25;UBERON:0004161!1.03e-07!25;UBERON:0009856!1.69e-07!26;UBERON:0000344!4.29e-07!12;UBERON:0007499!9.21e-07!25|ontology_enrichment_uberon_v019=UBERON:0000941;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0004903;6.17e-09;2!UBERON:0003714;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2!UBERON:0002173;6.17e-09;2!UBERON:0002186;6.17e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.86e-17,1;UBERON:0001785,8.86e-17,1;UBERON:0002464,8.86e-17,1;UBERON:0004904,8.86e-17,1;UBERON:0001021,8.86e-17,1;UBERON:0003902,8.86e-17,1;UBERON:0005425,8.86e-17,1;UBERON:0003714,4.70e-09,2;UBERON:0005162,4.70e-09,2;UBERON:0000122,4.70e-09,2;UBERON:0004903,5.94e-09,2;UBERON:0002173,5.94e-09,2;UBERON:0002186,5.94e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17903228824749,0.822405995998037,0,0,0,0,0,0,0.443067789167242,0.812411591295047,0.128091319725675,0.390178042679635,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0,0,1.26675244876796,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,1.04171104434093,0,0,1.365521379426,1.27126825146383,0,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0.0897576444097721,0.217294743844016,0,0,0,4.08773192782946,0.470940769185074,0.664846727600626,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0.296521128680622,0.370691816839509,0,0,0,0,0.729819156862664,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.240476460754601,0.213452994739353,0.39961921916426,1.15272333723285,0.572682980829578,0.171594997861965,0,0,0.707082103850386,0,0,0,0,0,0,0,0.429765441419957,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:50834337..50834341,+ | |||
|id=chr13:50834337..50834341,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.64e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:305!2.43e-22!106;DOID:162!2.33e-20!235;DOID:0050687!3.83e-20!143;DOID:14566!2.16e-19!239;DOID:0050686!2.77e-10!137;DOID:1749!7.44e-09!14;DOID:7!1.17e-07!39;DOID:1036!8.53e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.53e-16;1!DOID:10165;1.53e-16;1!DOID:1798;1.53e-16;1!DOID:1325;1.18e-09;7!DOID:3904;1.18e-09;7!DOID:3910;6.17e-09;2!DOID:3905;1.05e-07;9!DOID:305;5.48e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.63e-16,1;DOID:10165,2.63e-16,1;DOID:1798,2.63e-16,1;DOID:305,7.34e-11,106;DOID:1325,9.52e-10,7;DOID:3904,9.52e-10,7;DOID:3910,5.94e-09,2;DOID:0050687,7.96e-08,143;DOID:3905,8.90e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002294!9.51e-08!7;UBERON:0001173!9.51e-08!7;UBERON:0004912!9.51e-08!7;UBERON:0009497!1.03e-07!25;UBERON:0000015!1.03e-07!25;UBERON:0002423!1.03e-07!25;UBERON:0006235!1.03e-07!25;UBERON:0004161!1.03e-07!25;UBERON:0009856!1.69e-07!26;UBERON:0000344!4.29e-07!12;UBERON:0007499!9.21e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0004903;6.17e-09;2!UBERON:0003714;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2!UBERON:0002173;6.17e-09;2!UBERON:0002186;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.86e-17,1;UBERON:0001785,8.86e-17,1;UBERON:0002464,8.86e-17,1;UBERON:0004904,8.86e-17,1;UBERON:0001021,8.86e-17,1;UBERON:0003902,8.86e-17,1;UBERON:0005425,8.86e-17,1;UBERON:0003714,4.70e-09,2;UBERON:0005162,4.70e-09,2;UBERON:0000122,4.70e-09,2;UBERON:0004903,5.94e-09,2;UBERON:0002173,5.94e-09,2;UBERON:0002186,5.94e-09,2 | |||
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|short_description=p@chr13:50834337..50834341,+ | |||
}} |
Revision as of 02:33, 11 September 2013
Short description: | p@chr13:50834337..50834341, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:50834337..50834341, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.86e-17 | 1 |
cranial nerve | 8.86e-17 | 1 |
nerve trunk | 8.86e-17 | 1 |
nerve connecting eye with brain | 8.86e-17 | 1 |
nerve | 8.86e-17 | 1 |
retinal neural layer | 8.86e-17 | 1 |
presumptive neural retina | 8.86e-17 | 1 |
neural tissue | 4.70e-09 | 2 |
multi cell component structure | 4.70e-09 | 2 |
neuron projection bundle | 4.70e-09 | 2 |
bronchoalveolar duct junction | 5.94e-09 | 2 |
alveolar duct | 5.94e-09 | 2 |
bronchiole | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.63e-16 | 1 |
endocrine pancreas cancer | 2.63e-16 | 1 |
pancreatic endocrine carcinoma | 2.63e-16 | 1 |
carcinoma | 7.34e-11 | 106 |
bronchus cancer | 9.52e-10 | 7 |
bronchogenic carcinoma | 9.52e-10 | 7 |
lung adenocarcinoma | 5.94e-09 | 2 |
cell type cancer | 7.96e-08 | 143 |
lung carcinoma | 8.90e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.