FFCP PHASE1:Hg19::chr17:39845542..39845569,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1382|description=CAGE_peak_at_chr17:39845542..39845569,-|id=chr17:39845542..39845569,-|ontology_enrichment_celltype=CL:0000738!2.51e-26!140;CL:0002057!2.63e-26!42;CL:0000860!8.78e-24!45;CL:0002031!1.45e-21!124;CL:0000037!2.49e-21!172;CL:0000566!2.49e-21!172;CL:0002087!8.67e-21!119;CL:0000988!7.42e-20!182;CL:0002032!6.38e-19!165;CL:0000837!6.38e-19!165;CL:0000766!6.03e-17!76;CL:0000557!3.45e-14!71;CL:0002009!7.55e-14!65;CL:0000839!1.31e-13!70;CL:0002194!6.80e-13!63;CL:0000576!6.80e-13!63;CL:0000040!6.80e-13!63;CL:0000559!6.80e-13!63;CL:0000763!6.20e-12!112;CL:0000049!6.20e-12!112;CL:0000838!1.45e-07!52;CL:0002393!2.55e-07!9;CL:0002397!2.55e-07!9;CL:0000542!3.45e-07!53;CL:0000051!3.45e-07!53|ontology_enrichment_celltype_v019=CL:0000860;2.91e-27;33!CL:0002057;2.91e-27;33!CL:0000576;1.31e-20;48!CL:0000766;3.60e-19;69!CL:0000473;5.27e-19;39!CL:0000234;5.27e-19;39!CL:0002087;1.22e-13;104!CL:0002393;2.94e-10;6!CL:0002397;2.94e-10;6!CL:0000094;9.01e-10;8!CL:0000738;9.78e-10;136!CL:0000624;1.61e-09;6!CL:0000791;6.38e-09;18!CL:0000789;6.38e-09;18!CL:0002419;6.38e-09;18!CL:0000763;1.03e-08;100!CL:0000623;3.71e-08;3!CL:0000775;8.47e-08;3!CL:0000988;9.11e-08;177!CL:0000898;3.59e-07;3!CL:0000081;6.91e-07;11!CL:0000226;7.62e-07;3!CL:0000842;7.62e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,2.32e-45,136;CL:0000860,2.21e-40,42;CL:0002057,2.21e-40,42;CL:0000037,2.12e-36,168;CL:0002087,4.93e-36,115;CL:0000766,1.50e-34,72;CL:0002031,2.15e-34,120;CL:0000473,3.39e-34,48;CL:0000234,3.39e-34,48;CL:0000988,1.05e-33,177;CL:0002032,2.03e-31,161;CL:0000837,2.03e-31,161;CL:0000557,3.16e-27,67;CL:0002009,1.29e-26,61;CL:0000839,1.19e-25,66;CL:0002194,1.43e-25,59;CL:0000576,1.43e-25,59;CL:0000040,1.43e-25,59;CL:0000559,1.43e-25,59;CL:0000763,2.88e-22,108;CL:0000049,2.88e-22,108;CL:0000134,1.62e-12,354;CL:0002393,4.04e-12,9;CL:0002397,4.04e-12,9;CL:0002320,5.93e-12,361;CL:0000094,3.90e-10,8;CL:0000219,5.50e-10,386;CL:0000624,1.10e-09,6;CL:0000034,5.49e-09,441;CL:0000791,5.74e-09,18;CL:0000789,5.74e-09,18;CL:0002420,5.74e-09,18;CL:0002419,5.74e-09,18;CL:0000790,5.74e-09,18;CL:0000838,7.24e-09,52;CL:0000048,1.19e-08,427;CL:0000542,1.28e-08,53;CL:0000051,1.28e-08,53;CL:0000723,2.63e-08,433;CL:0000623,3.34e-08,3;CL:0000825,3.34e-08,3;CL:0000775,6.13e-08,3;CL:0000898,2.09e-07,3;CL:0000081,3.85e-07,11;CL:0000226,7.86e-07,3;CL:0000842,7.86e-07,3|ontology_enrichment_development_v019=CL:0002057;5.75e-30;42!CL:0000790;6.38e-09;18!CL:0000049;3.18e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.60e-13!80;UBERON:0001474!1.68e-11!86;UBERON:0002390!5.47e-11!102;UBERON:0003061!5.47e-11!102;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0002193!3.57e-09!112;UBERON:0002405!3.12e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.97e-26,76;UBERON:0002390,1.31e-23,98;UBERON:0003061,1.31e-23,98;UBERON:0001474,1.66e-23,82;UBERON:0002405,4.65e-21,93;UBERON:0004765,1.45e-20,90;UBERON:0002193,1.94e-20,108;UBERON:0001434,1.47e-17,100;UBERON:0002384,8.64e-12,371;UBERON:0002204,5.00e-07,167|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.157421562627358,1.57345710739562,0.383829398097213,1.85779347979291,0.919421224478927,0.30120591877825,0.369754010166788,0.232401601740905,0,1.17440175733939,5.53995408531877,6.21687787157439,8.46342395791822,0,0,0,1.01778767145695,0.377875943688809,0.485168122375632,2.78914844286822,2.05583944010913,1.54853185447552,0.863077176966451,3.07392847834921,4.02019790810595,6.55016793399575,0.645484683583826,4.06279459783025,1.31769637679823,0.818718450173537,0.224723484445085,1.53041946185451,0.962787081228281,2.55734850319616,1.31940520074686,1.39624560335142,1.27867425159808,3.48251086354301,1.70215567407342,3.11411124497787,1.50749199154046,2.08593167368081,0.65156653411535,1.21079900526674,1.47311054395026,1.26584954976354,0.633765858935825,1.06302149982522,2.30624510059213,1.01095768031846,0.450530678524519,0.48217676009124,2.56511469367124,1.39241674039363,0.547992461293902,0,0.546138611262131,0.889509253863555,1.70692089026603,0.800791974072025,0,1.98313461835459,0.954053754535364,6.83055562931338,1.76171156811282,5.3518251937532,3.96513985737078,2.24203425192614,0.263384084775077,0.786839080455332,2.35806457649499,5.14003747498773,1.17030546773475,1.95553359980154,2.8406868344084,5.84480185223734,0.445641827540694,1.47302953737419,1.77227115666897,1.08321545506006,1.66518715643378,0.910415432919148,0.822189523018381,2.76350017785848,0,2.96573126324121,1.07016331235885,6.27213142829861,0,2.29932296161153,4.46715679127419,1.51811815211702,0.318565414324097,0,0.950452044448374,0,0,0,1.1838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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1382 | |||
|description=CAGE_peak_at_chr17:39845542..39845569,- | |||
|id=chr17:39845542..39845569,- | |||
|ontology_enrichment_celltype=CL:0000738!2.51e-26!140;CL:0002057!2.63e-26!42;CL:0000860!8.78e-24!45;CL:0002031!1.45e-21!124;CL:0000037!2.49e-21!172;CL:0000566!2.49e-21!172;CL:0002087!8.67e-21!119;CL:0000988!7.42e-20!182;CL:0002032!6.38e-19!165;CL:0000837!6.38e-19!165;CL:0000766!6.03e-17!76;CL:0000557!3.45e-14!71;CL:0002009!7.55e-14!65;CL:0000839!1.31e-13!70;CL:0002194!6.80e-13!63;CL:0000576!6.80e-13!63;CL:0000040!6.80e-13!63;CL:0000559!6.80e-13!63;CL:0000763!6.20e-12!112;CL:0000049!6.20e-12!112;CL:0000838!1.45e-07!52;CL:0002393!2.55e-07!9;CL:0002397!2.55e-07!9;CL:0000542!3.45e-07!53;CL:0000051!3.45e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.91e-27;33!CL:0002057;2.91e-27;33!CL:0000576;1.31e-20;48!CL:0000766;3.60e-19;69!CL:0000473;5.27e-19;39!CL:0000234;5.27e-19;39!CL:0002087;1.22e-13;104!CL:0002393;2.94e-10;6!CL:0002397;2.94e-10;6!CL:0000094;9.01e-10;8!CL:0000738;9.78e-10;136!CL:0000624;1.61e-09;6!CL:0000791;6.38e-09;18!CL:0000789;6.38e-09;18!CL:0002419;6.38e-09;18!CL:0000763;1.03e-08;100!CL:0000623;3.71e-08;3!CL:0000775;8.47e-08;3!CL:0000988;9.11e-08;177!CL:0000898;3.59e-07;3!CL:0000081;6.91e-07;11!CL:0000226;7.62e-07;3!CL:0000842;7.62e-07;3 | |||
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|ontology_enrichment_development_v019=CL:0002057;5.75e-30;42!CL:0000790;6.38e-09;18!CL:0000049;3.18e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.60e-13!80;UBERON:0001474!1.68e-11!86;UBERON:0002390!5.47e-11!102;UBERON:0003061!5.47e-11!102;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0002193!3.57e-09!112;UBERON:0002405!3.12e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.97e-26,76;UBERON:0002390,1.31e-23,98;UBERON:0003061,1.31e-23,98;UBERON:0001474,1.66e-23,82;UBERON:0002405,4.65e-21,93;UBERON:0004765,1.45e-20,90;UBERON:0002193,1.94e-20,108;UBERON:0001434,1.47e-17,100;UBERON:0002384,8.64e-12,371;UBERON:0002204,5.00e-07,167 | |||
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| |||
|short_description=p@chr17:39845542..39845569,- | |||
}} |
Revision as of 13:37, 11 September 2013
Short description: | p@chr17:39845542..39845569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39845542..39845569, - |
Coexpression cluster: | C1382_CD14_Natural_CD8_CD4_Basophils_CD19_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.97e-26 | 76 |
hematopoietic system | 1.31e-23 | 98 |
blood island | 1.31e-23 | 98 |
bone element | 1.66e-23 | 82 |
immune system | 4.65e-21 | 93 |
skeletal element | 1.45e-20 | 90 |
hemolymphoid system | 1.94e-20 | 108 |
skeletal system | 1.47e-17 | 100 |
connective tissue | 8.64e-12 | 371 |
musculoskeletal system | 5.00e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.