FFCP PHASE1:Hg19::chr17:46675469..46675481,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3216|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5117|TSSclassifier=S|UniProt=|association_with_transcript=30bp_to_AB464576,CU677079,DQ890732,HQ447184_5end|description=CAGE_peak_4_at_HOXB6_5end|id=chr17:46675469..46675481,-|ontology_enrichment_celltype=CL:1000497!2.48e-12!18;CL:0002518!2.48e-12!18;CL:1000449!1.03e-11!16;CL:0002681!2.67e-10!13;CL:0002584!2.67e-10!13;CL:1000507!4.65e-09!12;CL:1000494!4.65e-09!12|ontology_enrichment_celltype_v019=CL:1000449;5.11e-14;15!CL:0002681;1.11e-12;12!CL:0002584;1.11e-12;12!CL:1000497;5.46e-12;17!CL:0002518;5.46e-12;17!CL:1000507;1.09e-09;10!CL:1000494;1.09e-09;10!CL:1000746;3.74e-08;7!CL:1000612;3.74e-08;7|ontology_enrichment_celltype_v019_2=CL:1000449,2.78e-14,15;CL:0002681,6.14e-13,12;CL:0002584,6.14e-13,12;CL:1000497,3.23e-12,17;CL:0002518,3.23e-12,17;CL:1000507,7.78e-10,10;CL:1000494,7.78e-10,10;CL:1000746,1.79e-08,7;CL:1000612,1.79e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!2.20e-16!32;UBERON:0005177!3.16e-15!107;UBERON:0002113!1.64e-14!27;UBERON:0003918!1.64e-14!27;UBERON:0005095!1.64e-14!27;UBERON:0007687!1.64e-14!27;UBERON:0002417!6.37e-14!61;UBERON:0000916!6.37e-14!61;UBERON:0000080!2.27e-13!18;UBERON:0002120!2.27e-13!18;UBERON:0004875!2.27e-13!18;UBERON:0005721!2.27e-13!18;UBERON:0005754!2.27e-13!18;UBERON:0007297!2.27e-13!18;UBERON:0002100!5.21e-13!216;UBERON:0003887!1.51e-12!21;UBERON:0006555!1.63e-12!17;UBERON:0005103!1.63e-12!17;UBERON:0000083!1.63e-12!17;UBERON:0009201!1.63e-12!17;UBERON:0004819!1.63e-12!17;UBERON:0006553!1.63e-12!17;UBERON:0003074!1.63e-12!17;UBERON:0003060!1.63e-12!17;UBERON:0009569!4.01e-12!113;UBERON:0000058!4.63e-12!26;UBERON:0005172!8.50e-12!55;UBERON:0005173!8.50e-12!55;UBERON:0004211!1.03e-11!16;UBERON:0001285!1.03e-11!16;UBERON:0007684!1.03e-11!16;UBERON:0003220!1.03e-11!16;UBERON:0004208!1.03e-11!16;UBERON:0000353!2.14e-11!17;UBERON:0004876!3.15e-11!20;UBERON:0001225!2.67e-10!13;UBERON:0008987!2.67e-10!13;UBERON:0001008!6.09e-10!45;UBERON:0000466!1.08e-09!126;UBERON:0006554!1.33e-09!44;UBERON:0009773!4.65e-09!12;UBERON:0001231!4.65e-09!12;UBERON:0004810!4.65e-09!12;UBERON:0003104!9.79e-09!238;UBERON:0009142!9.79e-09!238;UBERON:0003886!3.62e-08!63;UBERON:0000464!1.19e-07!104;UBERON:0005256!1.31e-07!143;UBERON:0001851!2.32e-07!16;UBERON:0003064!8.88e-07!37|ontology_enrichment_uberon_v019=UBERON:0000353;2.14e-14;15!UBERON:0000489;2.46e-14;29!UBERON:0002113;2.85e-14;24!UBERON:0011143;2.85e-14;24!UBERON:0006555;5.11e-14;15!UBERON:0004819;5.11e-14;15!UBERON:0001285;5.11e-14;15!UBERON:0007684;5.11e-14;15!UBERON:0001225;1.11e-12;12!UBERON:0008987;1.11e-12;12!UBERON:0006554;1.61e-10;30!UBERON:0001008;1.61e-10;30!UBERON:0004211;1.09e-09;10!UBERON:0009773;1.09e-09;10!UBERON:0001231;1.09e-09;10!UBERON:0004810;1.09e-09;10!UBERON:0001851;1.20e-09;15!UBERON:0002072;3.15e-09;5!UBERON:0002417;2.60e-08;58!UBERON:0000916;2.60e-08;58!UBERON:0000074;3.74e-08;7!UBERON:0001229;3.74e-08;7!UBERON:0005172;8.20e-08;52!UBERON:0005173;8.20e-08;52!UBERON:0011135;1.35e-07;5!UBERON:0002216;1.35e-07;5!UBERON:0011134;1.35e-07;5!UBERON:0002209;1.35e-07;5!UBERON:0002213;1.35e-07;5!UBERON:0007844;1.35e-07;5!UBERON:0011138;1.35e-07;5!UBERON:0001130;1.35e-07;5!UBERON:0001066;1.35e-07;5!UBERON:0001468;1.35e-07;5!UBERON:0006947;9.48e-07;3!UBERON:0004054;9.48e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.66e-17,26;UBERON:0003918,3.66e-17,26;UBERON:0011143,3.66e-17,26;UBERON:0005095,3.66e-17,26;UBERON:0007687,3.66e-17,26;UBERON:0000489,3.68e-17,31;UBERON:0006555,8.80e-16,16;UBERON:0004819,8.80e-16,16;UBERON:0002417,1.58e-15,60;UBERON:0000916,1.58e-15,60;UBERON:0000353,1.11e-14,15;UBERON:0004211,2.78e-14,15;UBERON:0009773,2.78e-14,15;UBERON:0001231,2.78e-14,15;UBERON:0001285,2.78e-14,15;UBERON:0007684,2.78e-14,15;UBERON:0004208,2.78e-14,15;UBERON:0009569,1.18e-13,112;UBERON:0000058,3.31e-13,19;UBERON:0001225,6.14e-13,12;UBERON:0008987,6.14e-13,12;UBERON:0005172,1.56e-12,54;UBERON:0005173,1.56e-12,54;UBERON:0000080,1.13e-11,9;UBERON:0002120,1.13e-11,9;UBERON:0004875,1.13e-11,9;UBERON:0005721,1.13e-11,9;UBERON:0005754,1.13e-11,9;UBERON:0007297,1.13e-11,9;UBERON:0005177,1.99e-11,101;UBERON:0003104,3.04e-10,160;UBERON:0009142,3.04e-10,160;UBERON:0005103,5.12e-10,8;UBERON:0000083,5.12e-10,8;UBERON:0009201,5.12e-10,8;UBERON:0006553,5.12e-10,8;UBERON:0003074,5.12e-10,8;UBERON:0003060,5.12e-10,8;UBERON:0001851,7.56e-10,15;UBERON:0004810,7.78e-10,10;UBERON:0002072,2.01e-09,5;UBERON:0004876,3.16e-09,11;UBERON:0002100,6.59e-09,199;UBERON:0010532,1.79e-08,7;UBERON:0000074,1.79e-08,7;UBERON:0001229,1.79e-08,7;UBERON:0001230,1.79e-08,7;UBERON:0003220,1.79e-08,7;UBERON:0005749,1.79e-08,7;UBERON:0004199,1.79e-08,7;UBERON:0004209,1.79e-08,7;UBERON:0004198,1.79e-08,7;UBERON:0003887,2.59e-08,12;UBERON:0006554,3.34e-08,47;UBERON:0001008,6.27e-08,48;UBERON:001113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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=30bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |||
|description=CAGE_peak_4_at_HOXB6_5end | |||
|id=chr17:46675469..46675481,- | |||
|ontology_enrichment_celltype=CL:1000497!2.48e-12!18;CL:0002518!2.48e-12!18;CL:1000449!1.03e-11!16;CL:0002681!2.67e-10!13;CL:0002584!2.67e-10!13;CL:1000507!4.65e-09!12;CL:1000494!4.65e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.11e-14;15!CL:0002681;1.11e-12;12!CL:0002584;1.11e-12;12!CL:1000497;5.46e-12;17!CL:0002518;5.46e-12;17!CL:1000507;1.09e-09;10!CL:1000494;1.09e-09;10!CL:1000746;3.74e-08;7!CL:1000612;3.74e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.78e-14,15;CL:0002681,6.14e-13,12;CL:0002584,6.14e-13,12;CL:1000497,3.23e-12,17;CL:0002518,3.23e-12,17;CL:1000507,7.78e-10,10;CL:1000494,7.78e-10,10;CL:1000746,1.79e-08,7;CL:1000612,1.79e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000353;2.14e-14;15!UBERON:0000489;2.46e-14;29!UBERON:0002113;2.85e-14;24!UBERON:0011143;2.85e-14;24!UBERON:0006555;5.11e-14;15!UBERON:0004819;5.11e-14;15!UBERON:0001285;5.11e-14;15!UBERON:0007684;5.11e-14;15!UBERON:0001225;1.11e-12;12!UBERON:0008987;1.11e-12;12!UBERON:0006554;1.61e-10;30!UBERON:0001008;1.61e-10;30!UBERON:0004211;1.09e-09;10!UBERON:0009773;1.09e-09;10!UBERON:0001231;1.09e-09;10!UBERON:0004810;1.09e-09;10!UBERON:0001851;1.20e-09;15!UBERON:0002072;3.15e-09;5!UBERON:0002417;2.60e-08;58!UBERON:0000916;2.60e-08;58!UBERON:0000074;3.74e-08;7!UBERON:0001229;3.74e-08;7!UBERON:0005172;8.20e-08;52!UBERON:0005173;8.20e-08;52!UBERON:0011135;1.35e-07;5!UBERON:0002216;1.35e-07;5!UBERON:0011134;1.35e-07;5!UBERON:0002209;1.35e-07;5!UBERON:0002213;1.35e-07;5!UBERON:0007844;1.35e-07;5!UBERON:0011138;1.35e-07;5!UBERON:0001130;1.35e-07;5!UBERON:0001066;1.35e-07;5!UBERON:0001468;1.35e-07;5!UBERON:0006947;9.48e-07;3!UBERON:0004054;9.48e-07;3 | |||
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| |||
|short_description=p4@HOXB6 | |||
}} |
Revision as of 14:15, 11 September 2013
Short description: | p4@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HOXB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.78e-14 | 15 |
kidney cortical cell | 6.14e-13 | 12 |
renal cortical epithelial cell | 6.14e-13 | 12 |
kidney cell | 3.23e-12 | 17 |
kidney epithelial cell | 3.23e-12 | 17 |
kidney tubule cell | 7.78e-10 | 10 |
nephron tubule epithelial cell | 7.78e-10 | 10 |
glomerular cell | 1.79e-08 | 7 |
kidney corpuscule cell | 1.79e-08 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.