FFCP PHASE1:Hg19::chr17:46675558..46675577,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-46bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |||
|coexpression_cluster_id=C3645 | |||
|description=CAGE_peak_2_at_HOXB6_5end | |||
|id=chr17:46675558..46675577,- | |||
|ontology_enrichment_celltype=CL:1000449!4.07e-13!16;CL:1000497!3.22e-12!18;CL:0002518!3.22e-12!18;CL:0002681!5.95e-11!13;CL:0002584!5.95e-11!13;CL:1000507!3.14e-10!12;CL:1000494!3.14e-10!12;CL:0000222!1.35e-09!119 | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@HOXB6 | |||
}} |
Revision as of 14:15, 11 September 2013
Short description: | p2@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HOXB6_5end |
Coexpression cluster: | C3645_ductus_seminal_alveolar_endometrial_Smooth_small_nonsmall |
Association with transcript: | -46bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.97e-18 | 15 |
kidney cell | 2.67e-17 | 17 |
kidney epithelial cell | 2.67e-17 | 17 |
kidney cortical cell | 6.71e-15 | 12 |
renal cortical epithelial cell | 6.71e-15 | 12 |
kidney tubule cell | 1.45e-12 | 10 |
nephron tubule epithelial cell | 1.45e-12 | 10 |
glomerular cell | 4.16e-09 | 7 |
kidney corpuscule cell | 4.16e-09 | 7 |
glomerular endothelial cell | 2.57e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.