FFCP PHASE1:Hg19::chr19:42759266..42759290,-: Difference between revisions
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{{FFCP | 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798,29.3361374802924,39.690412973746,12.1915510702658,31.2520741998882,14.5290498961642,19.474355412684,27.9798576802271,20.3586170638846,23.9187094542494,5.65094895634227,6.24464749472807,4.90696182767533,12.1215644073173,18.1871952477752,10.3542940445727,24.1984748984465,15.7903759947328,9.81625384066649,31.213377446176,20.803972378458,25.3181908972195,67.1843440835611,11.2547046747213,51.9715590932006,26.4206782317906,36.8036480707087,26.3085421428739,62.4970265098948,72.0066790344803,67.5960350747625,20.9882871431256,9.69999463515416,35.2251129245607,38.0890019185939,21.437183414724,32.4999878988085,12.7526918693026,27.45702375783,17.2297745962234,5.04143392443436,38.7972186324262,20.8303582865088,29.9815782544224,29.5424632688087,13.5665181849901,77.9571543717136,40.2029318203177,54.9190217472721,13.807198521202,27.6493548741622,62.7254138432805,24.809723450533,14.0672522021957,24.6192292812537,25.384647214065,19.9605716393011,30.3243754936592,24.2134210570293,22.1154872256267,26.8883035222165,6.56369770821863,12.061670870858,30.2688818817469,54.8718282402016,24.4026236791627,9.10693120993088,4.03540466662589,16.9950369186257,14.7980424378343,19.0710095849673,15.671822307586,40.8141462461056,30.9262285044584,32.1628862722332,22.220442086186,10.7894459835307,32.8886059043654,25.7669567462243,55.2136161728164,28.3079203357944,25.2635281725787,31.0538597126583,39.7409585622209,13.9051978324799,36.151083289487,58.7640960382718,11.2239591062235,47.4525015933354,68.9702647459558,34.5629830907046,14.6277301998894,12.5431920774399,13.9749983805019,23.709674810692,11.2262365586585,19.5430022968522,16.2441619626164,39.8205337200141,17.372591349898,40.720586944078,5.17943069750316,14.5781185735871,33.6346185088078,31.5712145488441,8.88969961156001,18.5024220900072,21.0488560676296,9.93925521942848,13.8525051099241,17.5116898537341,43.217528540449,29.0684215470263,21.1642783362685,27.4566120364374,7.77732605435366,25.127483790713,27.9223616307461,38.8843269376728,37.3839652313197,21.7102850533462,44.4114848137947,27.8835825030552,10.1775745005225,20.4679025595101,9.06727443587601,24.8314372003816,15.5967956357544,42.2851770296781,49.6980420908532,41.474809016458,10.0360658778287,30.6835567498932,50.2193274525114,32.8144696328307,25.9575937274273,21.3221257971283,9.39683918887781,45.4847618631059,25.5991962652374,9.61982658956018,39.9742812976575,9.77759403240263,41.147833132504,32.4236597488976,36.4834553361863,40.6491673737248,21.3233981900981,23.3303142834466,18.7307838524418,36.1895584344852,41.1523935670851,22.403799713914,27.4879376983178,23.7311255207688,23.9563310759697,22.8323459719452,35.0004362316261,27.6108095933191,19.7809942724668,24.76074424363,23.1686738744328,19.0429428465964,23.4640942403454,39.1172621385173,30.1103171953646,17.3096761288233,27.9770573091526,16.6695615997681|short_description=p1@ERF}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2077 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3444 | |||
|TSSclassifier=S | |||
|UniProt=P50548 | |||
|association_with_transcript=18bp_to_ENST00000222329,NM_006494,uc002ote.3_5end | |||
|description=CAGE_peak_1_at_ERF_5end | |||
|id=chr19:42759266..42759290,- | |||
|ontology_enrichment_celltype=CL:0000220!4.97e-17!246;CL:0002321!9.09e-17!248;CL:0000066!1.30e-09!254;CL:0000115!1.13e-07!35;CL:0000055!5.02e-07!180;CL:0000222!6.07e-07!119;CL:0002139!6.44e-07!24;CL:0002078!8.11e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.71e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.28e-17,250;CL:0000066,1.70e-09,253;CL:0000115,1.09e-07,36;CL:0000222,4.10e-07,121;CL:0002139,6.44e-07,24;CL:0002078,7.42e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.51e-14!312;UBERON:0000483!3.05e-14!309;UBERON:0003914!1.12e-12!118;UBERON:0000468!1.92e-11!659;UBERON:0000055!2.71e-10!69;UBERON:0004872!3.46e-10!84;UBERON:0000467!4.93e-10!625;UBERON:0002049!5.61e-10!79;UBERON:0007798!5.61e-10!79;UBERON:0000480!7.28e-10!626;UBERON:0001981!1.58e-09!60;UBERON:0007500!1.58e-09!60;UBERON:0004537!1.58e-09!60;UBERON:0006965!1.58e-09!60;UBERON:0002050!2.84e-09!605;UBERON:0005423!2.84e-09!605;UBERON:0000923!3.15e-09!604;UBERON:0005291!3.15e-09!604;UBERON:0006598!3.15e-09!604;UBERON:0002532!3.15e-09!604;UBERON:0000922!3.61e-09!612;UBERON:0000475!1.08e-08!365;UBERON:0004535!3.29e-08!110;UBERON:0004111!3.32e-08!241;UBERON:0005085!3.79e-08!29;UBERON:0000025!4.06e-08!194;UBERON:0001637!8.52e-08!42;UBERON:0003509!8.52e-08!42;UBERON:0004572!8.52e-08!42;UBERON:0001009!1.10e-07!113;UBERON:0009569!5.54e-07!113;UBERON:0000477!7.77e-07!286;UBERON:0000490!9.53e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;3.79e-07;31 | |||
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Revision as of 20:55, 11 September 2013
Short description: | p1@ERF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ERF_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000222329, NM_006494, uc002ote.3_5end |
EntrezGene: | ERF |
HGNC: | 3444 |
UniProt: | P50548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.28e-17 | 250 |
epithelial cell | 1.70e-09 | 253 |
endothelial cell | 1.09e-07 | 36 |
mesodermal cell | 4.10e-07 | 121 |
endothelial cell of vascular tree | 6.44e-07 | 24 |
meso-epithelial cell | 7.42e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
cell layer | 4.58e-14 | 309 |
epithelium | 5.56e-14 | 306 |
epithelial tube | 1.52e-12 | 117 |
vessel | 1.66e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 2.28e-10 | 83 |
vasculature | 3.65e-10 | 78 |
vascular system | 3.65e-10 | 78 |
developing anatomical structure | 7.15e-10 | 581 |
epithelial tube open at both ends | 9.46e-10 | 59 |
blood vessel | 9.46e-10 | 59 |
blood vasculature | 9.46e-10 | 59 |
vascular cord | 9.46e-10 | 59 |
embryo | 3.40e-09 | 592 |
cardiovascular system | 2.49e-08 | 109 |
embryonic structure | 2.69e-08 | 564 |
anatomical conduit | 2.85e-08 | 240 |
germ layer | 4.20e-08 | 560 |
germ layer / neural crest | 4.20e-08 | 560 |
embryonic tissue | 4.20e-08 | 560 |
presumptive structure | 4.20e-08 | 560 |
germ layer / neural crest derived structure | 4.20e-08 | 560 |
epiblast (generic) | 4.20e-08 | 560 |
tube | 4.48e-08 | 192 |
circulatory system | 8.47e-08 | 112 |
artery | 8.52e-08 | 42 |
arterial blood vessel | 8.52e-08 | 42 |
arterial system | 8.52e-08 | 42 |
ectodermal placode | 1.13e-07 | 31 |
unilaminar epithelium | 1.99e-07 | 148 |
subdivision of trunk | 4.30e-07 | 112 |
mesenchyme | 9.18e-07 | 160 |
entire embryonic mesenchyme | 9.18e-07 | 160 |
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