FFCP PHASE1:Hg19::chr2:219646666..219646681,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1593|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2605|TSSclassifier=S|UniProt=Q02318|association_with_transcript=187bp_to_ENST00000258415_5end|coexpression_cluster_id=C143|description=CAGE_peak_5_at_CYP27A1_5end|id=chr2:219646666..219646681,+|ontology_enrichment_celltype=CL:0002194!4.43e-45!63;CL:0000576!4.43e-45!63;CL:0000040!4.43e-45!63;CL:0000559!4.43e-45!63;CL:0002009!4.50e-43!65;CL:0002057!3.97e-42!42;CL:0000766!9.83e-41!76;CL:0000839!1.44e-38!70;CL:0000860!3.17e-38!45;CL:0000557!9.60e-38!71;CL:0000763!4.94e-25!112;CL:0000049!4.94e-25!112;CL:0000738!8.23e-17!140;CL:0002087!1.23e-16!119;CL:0002031!8.99e-14!124;CL:0000988!7.07e-11!182;CL:0002032!8.20e-11!165;CL:0000837!8.20e-11!165;CL:0000037!9.41e-11!172;CL:0000566!9.41e-11!172;CL:0002393!2.24e-07!9;CL:0002397!2.24e-07!9|ontology_enrichment_celltype_v019=CL:0000473;7.46e-79;39!CL:0000234;7.46e-79;39!CL:0000860;1.43e-74;33!CL:0002057;1.43e-74;33!CL:0000576;3.52e-52;48!CL:0000766;1.53e-34;69!CL:0000235;3.26e-22;6!CL:0000763;1.05e-16;100!CL:0002619;3.79e-12;3!CL:0000738;7.40e-12;136!CL:0002087;7.90e-11;104|ontology_enrichment_celltype_v019_2=CL:0002194,1.92e-99,59;CL:0000576,1.92e-99,59;CL:0000040,1.92e-99,59;CL:0000559,1.92e-99,59;CL:0002009,6.71e-96,61;CL:0000473,8.67e-92,48;CL:0000234,8.67e-92,48;CL:0000839,5.74e-88,66;CL:0000557,1.60e-86,67;CL:0000766,4.94e-84,72;CL:0000860,5.39e-72,42;CL:0002057,5.39e-72,42;CL:0000763,8.52e-53,108;CL:0000049,8.52e-53,108;CL:0002087,2.06e-46,115;CL:0002031,4.59e-44,120;CL:0000738,7.55e-40,136;CL:0002032,4.52e-32,161;CL:0000837,4.52e-32,161;CL:0000037,2.63e-30,168;CL:0000988,9.02e-30,177;CL:0000235,4.15e-22,6;CL:0000134,1.11e-13,354;CL:0002320,3.38e-13,361;CL:0000219,2.74e-12,386;CL:0002619,4.09e-12,3;CL:0000048,3.85e-10,427;CL:0000723,7.64e-10,433;CL:0000034,1.85e-09,441|ontology_enrichment_development_v019=CL:0002057;3.22e-52;42!CL:0000049;2.05e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.05e-31!102;UBERON:0003061!2.05e-31!102;UBERON:0002371!2.76e-31!80;UBERON:0001474!9.30e-28!86;UBERON:0002193!1.19e-27!112;UBERON:0002405!8.34e-27!115;UBERON:0004765!5.97e-25!101;UBERON:0001434!5.97e-25!101;UBERON:0002204!1.48e-15!167;UBERON:0003081!3.22e-11!216;UBERON:0007023!1.30e-07!115;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-75,76;UBERON:0001474,5.25e-69,82;UBERON:0004765,5.03e-62,90;UBERON:0002390,6.64e-62,98;UBERON:0003061,6.64e-62,98;UBERON:0002405,1.03e-59,93;UBERON:0002193,3.02e-55,108;UBERON:0001434,7.48e-55,100;UBERON:0002204,1.67e-30,167;UBERON:0003081,6.66e-26,203;UBERON:0000926,8.12e-14,315;UBERON:0004120,8.12e-14,315;UBERON:0006603,8.12e-14,315;UBERON:0002384,1.54e-12,371|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0.802177789880567,1.08505435357926,4.03047853631864,10.3645973126073,4.37878464978117,2.76256653681173,3.02300754951048,2.66842467306598,3.95129362739664,4.93401465626191,5.26500830521676,2.58923153089935,1.0246428261164,0.945928919554341,2.41321976515633,0.645484683583826,0,3.20011977222428,3.82068610080984,4.71919317334678,2.44867113896722,1.28371610830437,1.91801137739712,2.63881040149373,1.39624560335142,2.55734850319616,2.90209238628584,2.8369261234557,2.4912889959823,2.00998932205395,2.60741459210101,2.38907729175628,1.81619850790011,1.84138817993782,0.632924774881769,0.845021145247767,0.637812899895131,0.838634582033504,1.79725809834392,1.95229960693958,1.12507910687956,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.196468613246569,0.364295288292542,0,2.59637914923747,1.74129737299267,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,16.8483070900251,7.43155811443641,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,4.01805673145701,21.0833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.613457458595699,0.500170521059677,0,0,0,0,0,0.300946099727719,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2605 | |||
|TSSclassifier=S | |||
|UniProt=Q02318 | |||
|association_with_transcript=187bp_to_ENST00000258415_5end | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_5_at_CYP27A1_5end | |||
|id=chr2:219646666..219646681,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.43e-45!63;CL:0000576!4.43e-45!63;CL:0000040!4.43e-45!63;CL:0000559!4.43e-45!63;CL:0002009!4.50e-43!65;CL:0002057!3.97e-42!42;CL:0000766!9.83e-41!76;CL:0000839!1.44e-38!70;CL:0000860!3.17e-38!45;CL:0000557!9.60e-38!71;CL:0000763!4.94e-25!112;CL:0000049!4.94e-25!112;CL:0000738!8.23e-17!140;CL:0002087!1.23e-16!119;CL:0002031!8.99e-14!124;CL:0000988!7.07e-11!182;CL:0002032!8.20e-11!165;CL:0000837!8.20e-11!165;CL:0000037!9.41e-11!172;CL:0000566!9.41e-11!172;CL:0002393!2.24e-07!9;CL:0002397!2.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.46e-79;39!CL:0000234;7.46e-79;39!CL:0000860;1.43e-74;33!CL:0002057;1.43e-74;33!CL:0000576;3.52e-52;48!CL:0000766;1.53e-34;69!CL:0000235;3.26e-22;6!CL:0000763;1.05e-16;100!CL:0002619;3.79e-12;3!CL:0000738;7.40e-12;136!CL:0002087;7.90e-11;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.92e-99,59;CL:0000576,1.92e-99,59;CL:0000040,1.92e-99,59;CL:0000559,1.92e-99,59;CL:0002009,6.71e-96,61;CL:0000473,8.67e-92,48;CL:0000234,8.67e-92,48;CL:0000839,5.74e-88,66;CL:0000557,1.60e-86,67;CL:0000766,4.94e-84,72;CL:0000860,5.39e-72,42;CL:0002057,5.39e-72,42;CL:0000763,8.52e-53,108;CL:0000049,8.52e-53,108;CL:0002087,2.06e-46,115;CL:0002031,4.59e-44,120;CL:0000738,7.55e-40,136;CL:0002032,4.52e-32,161;CL:0000837,4.52e-32,161;CL:0000037,2.63e-30,168;CL:0000988,9.02e-30,177;CL:0000235,4.15e-22,6;CL:0000134,1.11e-13,354;CL:0002320,3.38e-13,361;CL:0000219,2.74e-12,386;CL:0002619,4.09e-12,3;CL:0000048,3.85e-10,427;CL:0000723,7.64e-10,433;CL:0000034,1.85e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.22e-52;42!CL:0000049;2.05e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.05e-31!102;UBERON:0003061!2.05e-31!102;UBERON:0002371!2.76e-31!80;UBERON:0001474!9.30e-28!86;UBERON:0002193!1.19e-27!112;UBERON:0002405!8.34e-27!115;UBERON:0004765!5.97e-25!101;UBERON:0001434!5.97e-25!101;UBERON:0002204!1.48e-15!167;UBERON:0003081!3.22e-11!216;UBERON:0007023!1.30e-07!115;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-75,76;UBERON:0001474,5.25e-69,82;UBERON:0004765,5.03e-62,90;UBERON:0002390,6.64e-62,98;UBERON:0003061,6.64e-62,98;UBERON:0002405,1.03e-59,93;UBERON:0002193,3.02e-55,108;UBERON:0001434,7.48e-55,100;UBERON:0002204,1.67e-30,167;UBERON:0003081,6.66e-26,203;UBERON:0000926,8.12e-14,315;UBERON:0004120,8.12e-14,315;UBERON:0006603,8.12e-14,315;UBERON:0002384,1.54e-12,371 | |||
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|short_description=p5@CYP27A1 | |||
}} |
Revision as of 16:53, 12 September 2013
Short description: | p5@CYP27A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CYP27A1_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 187bp_to_ENST00000258415_5end |
EntrezGene: | CYP27A1 |
HGNC: | 2605 |
UniProt: | Q02318 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.92e-99 | 59 |
monocyte | 1.92e-99 | 59 |
monoblast | 1.92e-99 | 59 |
promonocyte | 1.92e-99 | 59 |
macrophage dendritic cell progenitor | 6.71e-96 | 61 |
defensive cell | 8.67e-92 | 48 |
phagocyte | 8.67e-92 | 48 |
myeloid lineage restricted progenitor cell | 5.74e-88 | 66 |
granulocyte monocyte progenitor cell | 1.60e-86 | 67 |
myeloid leukocyte | 4.94e-84 | 72 |
classical monocyte | 5.39e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.39e-72 | 42 |
myeloid cell | 8.52e-53 | 108 |
common myeloid progenitor | 8.52e-53 | 108 |
nongranular leukocyte | 2.06e-46 | 115 |
hematopoietic lineage restricted progenitor cell | 4.59e-44 | 120 |
leukocyte | 7.55e-40 | 136 |
hematopoietic oligopotent progenitor cell | 4.52e-32 | 161 |
hematopoietic multipotent progenitor cell | 4.52e-32 | 161 |
hematopoietic stem cell | 2.63e-30 | 168 |
hematopoietic cell | 9.02e-30 | 177 |
macrophage | 4.15e-22 | 6 |
mesenchymal cell | 1.11e-13 | 354 |
connective tissue cell | 3.38e-13 | 361 |
motile cell | 2.74e-12 | 386 |
adult endothelial progenitor cell | 4.09e-12 | 3 |
multi fate stem cell | 3.85e-10 | 427 |
somatic stem cell | 7.64e-10 | 433 |
stem cell | 1.85e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-75 | 76 |
bone element | 5.25e-69 | 82 |
skeletal element | 5.03e-62 | 90 |
hematopoietic system | 6.64e-62 | 98 |
blood island | 6.64e-62 | 98 |
immune system | 1.03e-59 | 93 |
hemolymphoid system | 3.02e-55 | 108 |
skeletal system | 7.48e-55 | 100 |
musculoskeletal system | 1.67e-30 | 167 |
lateral plate mesoderm | 6.66e-26 | 203 |
mesoderm | 8.12e-14 | 315 |
mesoderm-derived structure | 8.12e-14 | 315 |
presumptive mesoderm | 8.12e-14 | 315 |
connective tissue | 1.54e-12 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.