FFCP PHASE1:Hg19::chr20:5731027..5731055,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=149840|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26318|TSSclassifier=S|UniProt=Q8IYI0,C9J899,Q5TGA6|association_with_transcript=0bp_to_ENST00000303142,ENST00000378971,ENST00000378979,NM_152504,uc002wmf.2_5end|coexpression_cluster_id=C14|description=CAGE_peak_1_at_C20orf196_5end|id=chr20:5731027..5731055,+|ontology_enrichment_celltype=CL:0000037!6.35e-38!172;CL:0000566!6.35e-38!172;CL:0000988!6.85e-35!182;CL:0002032!8.24e-35!165;CL:0000837!8.24e-35!165;CL:0002087!4.72e-29!119;CL:0002031!1.22e-27!124;CL:0000738!1.72e-27!140;CL:0000542!2.47e-26!53;CL:0000051!2.47e-26!53;CL:0000838!9.58e-26!52;CL:0000945!4.41e-14!24;CL:0000826!4.41e-14!24;CL:0000763!4.19e-12!112;CL:0000049!4.19e-12!112;CL:0000084!8.56e-12!25;CL:0000827!8.56e-12!25;CL:0000791!8.45e-11!18;CL:0000789!8.45e-11!18;CL:0002420!8.45e-11!18;CL:0002419!8.45e-11!18;CL:0000790!8.45e-11!18;CL:0000236!1.07e-08!14;CL:0000839!8.19e-08!70;CL:0002057!2.17e-07!42;CL:0000625!2.98e-07!11;CL:0000766!3.09e-07!76|ontology_enrichment_celltype_v019=CL:0000542;1.15e-15;53!CL:0000945;3.42e-14;24!CL:0000084;5.26e-12;25!CL:0000791;4.69e-11;18!CL:0000789;4.69e-11;18!CL:0002419;4.69e-11;18!CL:0002087;7.22e-10;104!CL:0000236;2.83e-08;13!CL:0000988;9.26e-08;177!CL:0000625;2.09e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,1.41e-40,168;CL:0000988,2.00e-37,177;CL:0002032,2.18e-37,161;CL:0000837,2.18e-37,161;CL:0002087,6.71e-32,115;CL:0002031,2.60e-30,120;CL:0000738,5.97e-30,136;CL:0000542,2.45e-26,53;CL:0000051,2.45e-26,53;CL:0000838,9.49e-26,52;CL:0000945,4.39e-14,24;CL:0000826,4.39e-14,24;CL:0000763,9.42e-14,108;CL:0000049,9.42e-14,108;CL:0000084,8.53e-12,25;CL:0000827,8.53e-12,25;CL:0000791,8.42e-11,18;CL:0000789,8.42e-11,18;CL:0002420,8.42e-11,18;CL:0002419,8.42e-11,18;CL:0000790,8.42e-11,18;CL:0000839,1.83e-09,66;CL:0000473,3.73e-09,48;CL:0000234,3.73e-09,48;CL:0000766,1.02e-08,72;CL:0000236,1.06e-08,14;CL:0002194,5.30e-08,59;CL:0000576,5.30e-08,59;CL:0000040,5.30e-08,59;CL:0000559,5.30e-08,59;CL:0000557,1.16e-07,67;CL:0000860,2.16e-07,42;CL:0002057,2.16e-07,42;CL:0000625,2.97e-07,11;CL:0002009,6.53e-07,61|ontology_enrichment_development_v019=CL:0000051;1.15e-15;53!CL:0000790;4.69e-11;18|ontology_enrichment_disease=DOID:2531!4.24e-13!51;DOID:0060083!4.24e-13!51;DOID:1240!1.02e-09!39;DOID:8692!3.76e-07!31|ontology_enrichment_disease_v019=DOID:2531;1.74e-08;51!DOID:0060083;1.74e-08;51!DOID:1240;3.69e-08;39!DOID:8692;3.09e-07;31|ontology_enrichment_disease_v019_2=DOID:2531,4.22e-13,51;DOID:0060083,4.22e-13,51;DOID:1240,1.02e-09,39;DOID:8692,3.76e-07,31|ontology_enrichment_uberon=UBERON:0002390!1.45e-11!102;UBERON:0003061!1.45e-11!102;UBERON:0007023!2.16e-11!115;UBERON:0002193!8.98e-10!112;UBERON:0000178!4.25e-08!15;UBERON:0000179!4.25e-08!15;UBERON:0000463!4.25e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.50e-08;15!UBERON:0000179;3.50e-08;15!UBERON:0000463;3.50e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.77e-13,98;UBERON:0003061,2.77e-13,98;UBERON:0007023,2.19e-11,114;UBERON:0002193,3.19e-11,108;UBERON:0000178,4.24e-08,15;UBERON:0000179,4.24e-08,15;UBERON:0000463,4.24e-08,15|phase1_expression=2.90685406832891,2.35510576280081,2.11431606143957,6.00439790118782,3.12872766099101,3.48935409640147,2.53299878168311,1.26343974685366,0.261185628199839,1.47440361900905,2.79120467188971,1.09220686065086,2.11013582582763,1.36142988256051,0.662794751455832,4.70627602516243,3.01347264011988,0,2.43966399395253,3.20114750999649,3.67201244239655,1.88072832886853,3.72106783270374,1.64249310087461,2.51085279189606,17.8807369450206,16.666419658339,14.8763376682854,5.11373559903575,7.67658796194425,4.4896675761662,3.67768489791571,2.10844143144775,2.21852406100073,22.1556193659663,14.501261713717,10.2760153767197,3.32397245119126,5.41470008169383,5.20826089718044,9.62836539231675,8.09734165047449,7.98484259665978,7.26991193897824,6.42389104270976,5.57943340731977,6.0431549595478,9.04569353648017,7.12324653058738,4.89077066947656,6.14785695669842,4.02019790810595,6.20542225325913,3.87290810150296,4.06279459783025,6.77672422353377,6.5497476013883,5.16864014223695,9.18251677112708,6.09765151444578,4.47535988059329,4.94776950280074,5.58498241340569,8.09827026012119,6.09439401120026,4.53908179752912,3.73693349397345,4.52247597462138,5.21482918420201,4.34377689410233,8.47559303686716,4.05105399586321,5.06339819905415,10.1402537429732,8.50417199860174,8.59600446584341,10.7835485900635,5.55654503513573,5.46466994770072,18.5258283431812,7.35991705636633,8.76787938070243,15.839662001519,18.0225741716503,17.7901850772711,12.8019066769952,17.6174234295845,14.3688109988621,15.8650769468367,17.1729675816366,11.384259382189,6.45960908308033,8.41001101875504,9.25199300053181,11.2101712596307,11.3255156453283,10.8190373562608,9.03924754323079,8.01845846098086,12.0374276681288,26.3997035973208,27.9334205383493,3.89653456815823,10.5839934040915,20.0332017082889,17.7227115666897,12.7277815969557,10.7596708569567,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=149840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26318 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYI0,C9J899,Q5TGA6 | |||
|association_with_transcript=0bp_to_ENST00000303142,ENST00000378971,ENST00000378979,NM_152504,uc002wmf.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_C20orf196_5end | |||
|id=chr20:5731027..5731055,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.35e-38!172;CL:0000566!6.35e-38!172;CL:0000988!6.85e-35!182;CL:0002032!8.24e-35!165;CL:0000837!8.24e-35!165;CL:0002087!4.72e-29!119;CL:0002031!1.22e-27!124;CL:0000738!1.72e-27!140;CL:0000542!2.47e-26!53;CL:0000051!2.47e-26!53;CL:0000838!9.58e-26!52;CL:0000945!4.41e-14!24;CL:0000826!4.41e-14!24;CL:0000763!4.19e-12!112;CL:0000049!4.19e-12!112;CL:0000084!8.56e-12!25;CL:0000827!8.56e-12!25;CL:0000791!8.45e-11!18;CL:0000789!8.45e-11!18;CL:0002420!8.45e-11!18;CL:0002419!8.45e-11!18;CL:0000790!8.45e-11!18;CL:0000236!1.07e-08!14;CL:0000839!8.19e-08!70;CL:0002057!2.17e-07!42;CL:0000625!2.98e-07!11;CL:0000766!3.09e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.15e-15;53!CL:0000945;3.42e-14;24!CL:0000084;5.26e-12;25!CL:0000791;4.69e-11;18!CL:0000789;4.69e-11;18!CL:0002419;4.69e-11;18!CL:0002087;7.22e-10;104!CL:0000236;2.83e-08;13!CL:0000988;9.26e-08;177!CL:0000625;2.09e-07;11 | |||
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|ontology_enrichment_development_v019=CL:0000051;1.15e-15;53!CL:0000790;4.69e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!4.24e-13!51;DOID:0060083!4.24e-13!51;DOID:1240!1.02e-09!39;DOID:8692!3.76e-07!31 | |||
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|ontology_enrichment_disease_v019_2=DOID:2531,4.22e-13,51;DOID:0060083,4.22e-13,51;DOID:1240,1.02e-09,39;DOID:8692,3.76e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-11!102;UBERON:0003061!1.45e-11!102;UBERON:0007023!2.16e-11!115;UBERON:0002193!8.98e-10!112;UBERON:0000178!4.25e-08!15;UBERON:0000179!4.25e-08!15;UBERON:0000463!4.25e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.50e-08;15!UBERON:0000179;3.50e-08;15!UBERON:0000463;3.50e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.77e-13,98;UBERON:0003061,2.77e-13,98;UBERON:0007023,2.19e-11,114;UBERON:0002193,3.19e-11,108;UBERON:0000178,4.24e-08,15;UBERON:0000179,4.24e-08,15;UBERON:0000463,4.24e-08,15 | |||
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| |||
|short_description=p1@C20orf196 | |||
}} |
Revision as of 09:21, 12 September 2013
Short description: | p1@C20orf196 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C20orf196_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000303142, ENST00000378971, ENST00000378979, NM_152504, uc002wmf.2_5end |
EntrezGene: | C20orf196 |
HGNC: | 26318 |
UniProt: | Q8IYI0C9J899Q5TGA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.77e-13 | 98 |
blood island | 2.77e-13 | 98 |
adult organism | 2.19e-11 | 114 |
hemolymphoid system | 3.19e-11 | 108 |
blood | 4.24e-08 | 15 |
haemolymphatic fluid | 4.24e-08 | 15 |
organism substance | 4.24e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.22e-13 | 51 |
immune system cancer | 4.22e-13 | 51 |
leukemia | 1.02e-09 | 39 |
myeloid leukemia | 3.76e-07 | 31 |
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