FFCP PHASE1:Hg19::chr20:36766683..36766700,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7052|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=11778|TSSclassifier=N|UniProt=Q9BXQ0|association_with_transcript=-153bp_to_AF311286_5end|coexpression_cluster_id=C454|description=CAGE_peak_14_at_TGM2_5end|id=chr20:36766683..36766700,-|ontology_enrichment_celltype=CL:0000222!2.16e-10!119;CL:0000192!3.53e-10!42;CL:0000514!3.53e-10!42;CL:0000359!2.51e-08!32;CL:0000187!4.23e-07!54;CL:0000680!7.66e-07!57;CL:0000056!7.66e-07!57;CL:0000355!7.66e-07!57|ontology_enrichment_celltype_v019=CL:0000349;9.45e-15;19!CL:0002188;9.86e-13;5!CL:1000746;4.19e-09;7!CL:1000612;4.19e-09;7!CL:0002536;1.12e-08;2!CL:0000359;3.81e-08;32!CL:0002595;4.43e-08;5|ontology_enrichment_celltype_v019_2=CL:0000349,6.69e-15,19;CL:0002188,9.09e-13,5;CL:1000746,3.95e-09,7;CL:1000612,3.95e-09,7;CL:0002536,1.27e-08,2;CL:0000359,3.11e-08,32;CL:0002595,4.36e-08,5;CL:0000192,4.20e-07,43;CL:0000514,4.20e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.12e-08;2|ontology_enrichment_disease_v019_2=DOID:114,6.85e-09,2|ontology_enrichment_uberon=UBERON:0002049!4.89e-14!79;UBERON:0007798!4.89e-14!79;UBERON:0003914!5.77e-14!118;UBERON:0000055!8.56e-12!69;UBERON:0005631!3.36e-11!14;UBERON:0000158!3.36e-11!14;UBERON:0005256!3.50e-11!143;UBERON:0001009!3.94e-10!113;UBERON:0000477!6.04e-10!286;UBERON:0004872!7.29e-10!84;UBERON:0003064!1.23e-09!37;UBERON:0004535!2.43e-09!110;UBERON:0004111!2.69e-09!241;UBERON:0000490!3.43e-09!138;UBERON:0001981!4.78e-09!60;UBERON:0007500!4.78e-09!60;UBERON:0004537!4.78e-09!60;UBERON:0006965!4.78e-09!60;UBERON:0000483!1.77e-08!309;UBERON:0000119!3.89e-08!312;UBERON:0002100!4.39e-08!216;UBERON:0000468!7.97e-08!659;UBERON:0001637!9.21e-08!42;UBERON:0003509!9.21e-08!42;UBERON:0004572!9.21e-08!42;UBERON:0006554!1.18e-07!44;UBERON:0003124!2.29e-07!7;UBERON:0001008!2.58e-07!45;UBERON:0000481!9.32e-07!347;UBERON:0006555!9.75e-07!17;UBERON:0005103!9.75e-07!17;UBERON:0000083!9.75e-07!17;UBERON:0009201!9.75e-07!17;UBERON:0004819!9.75e-07!17;UBERON:0006553!9.75e-07!17;UBERON:0003074!9.75e-07!17;UBERON:0003060!9.75e-07!17|ontology_enrichment_uberon_v019=UBERON:0005631;2.68e-13;10!UBERON:0000158;2.68e-13;10!UBERON:0000478;2.51e-11;24!UBERON:0000074;4.19e-09;7!UBERON:0001229;4.19e-09;7!UBERON:0000305;5.74e-09;7!UBERON:0003834;4.43e-08;5!UBERON:0001533;4.43e-08;5!UBERON:0001637;7.68e-08;42!UBERON:0003509;7.68e-08;42!UBERON:0004572;7.68e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.13e-16,14;UBERON:0000158,1.13e-16,14;UBERON:0000478,1.92e-11,24;UBERON:0002049,7.32e-10,78;UBERON:0007798,7.32e-10,78;UBERON:0003124,2.64e-09,7;UBERON:0010532,3.95e-09,7;UBERON:0000074,3.95e-09,7;UBERON:0001229,3.95e-09,7;UBERON:0001230,3.95e-09,7;UBERON:0003220,3.95e-09,7;UBERON:0005749,3.95e-09,7;UBERON:0004199,3.95e-09,7;UBERON:0004209,3.95e-09,7;UBERON:0004198,3.95e-09,7;UBERON:0000305,5.31e-09,7;UBERON:0000055,6.04e-09,68;UBERON:0001637,7.67e-09,42;UBERON:0003509,7.67e-09,42;UBERON:0004572,7.67e-09,42;UBERON:0001009,1.22e-08,112;UBERON:0003914,3.77e-08,117;UBERON:0003834,4.36e-08,5;UBERON:0001533,4.36e-08,5;UBERON:0004872,4.84e-08,83;UBERON:0007500,5.33e-08,59;UBERON:0001981,5.33e-08,59;UBERON:0004537,5.33e-08,59;UBERON:0006965,5.33e-08,59;UBERON:0005103,5.46e-08,8;UBERON:0000083,5.46e-08,8;UBERON:0009201,5.46e-08,8;UBERON:0006553,5.46e-08,8;UBERON:0003074,5.46e-08,8;UBERON:0003060,5.46e-08,8;UBERON:0004871,7.06e-08,8;UBERON:0003081,4.02e-07,203;UBERON:0000080,4.23e-07,9;UBERON:0002120,4.23e-07,9;UBERON:0004875,4.23e-07,9;UBERON:0005721,4.23e-07,9;UBERON:0005754,4.23e-07,9;UBERON:0007297,4.23e-07,9;UBERON:0004535,6.24e-07,109|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,0,0,0.491467873003018,1.39560233594486,1.09220686065086,2.90143676051299,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0.486634870302636,0.189069634328136,4.65631734671384,1.05401742831751,0,0,0,0,0.348259474598534,1.59549552622638,0,0,0,0,0,0,0,0.419499436209906,2.20094433552054,1.04497483268405,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.625098097988558,0,0.337834441449967,0,0,0.366403487860815,0,0,0.436094052142534,0,0.633152558322899,0.132409180813219,0.286836620748814,0,0,0,1.97334038733728,0,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.11029397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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11778 | |||
|TSSclassifier=N | |||
|UniProt=Q9BXQ0 | |||
|association_with_transcript=-153bp_to_AF311286_5end | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_14_at_TGM2_5end | |||
|id=chr20:36766683..36766700,- | |||
|ontology_enrichment_celltype=CL:0000222!2.16e-10!119;CL:0000192!3.53e-10!42;CL:0000514!3.53e-10!42;CL:0000359!2.51e-08!32;CL:0000187!4.23e-07!54;CL:0000680!7.66e-07!57;CL:0000056!7.66e-07!57;CL:0000355!7.66e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.45e-15;19!CL:0002188;9.86e-13;5!CL:1000746;4.19e-09;7!CL:1000612;4.19e-09;7!CL:0002536;1.12e-08;2!CL:0000359;3.81e-08;32!CL:0002595;4.43e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.69e-15,19;CL:0002188,9.09e-13,5;CL:1000746,3.95e-09,7;CL:1000612,3.95e-09,7;CL:0002536,1.27e-08,2;CL:0000359,3.11e-08,32;CL:0002595,4.36e-08,5;CL:0000192,4.20e-07,43;CL:0000514,4.20e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.12e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.85e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.89e-14!79;UBERON:0007798!4.89e-14!79;UBERON:0003914!5.77e-14!118;UBERON:0000055!8.56e-12!69;UBERON:0005631!3.36e-11!14;UBERON:0000158!3.36e-11!14;UBERON:0005256!3.50e-11!143;UBERON:0001009!3.94e-10!113;UBERON:0000477!6.04e-10!286;UBERON:0004872!7.29e-10!84;UBERON:0003064!1.23e-09!37;UBERON:0004535!2.43e-09!110;UBERON:0004111!2.69e-09!241;UBERON:0000490!3.43e-09!138;UBERON:0001981!4.78e-09!60;UBERON:0007500!4.78e-09!60;UBERON:0004537!4.78e-09!60;UBERON:0006965!4.78e-09!60;UBERON:0000483!1.77e-08!309;UBERON:0000119!3.89e-08!312;UBERON:0002100!4.39e-08!216;UBERON:0000468!7.97e-08!659;UBERON:0001637!9.21e-08!42;UBERON:0003509!9.21e-08!42;UBERON:0004572!9.21e-08!42;UBERON:0006554!1.18e-07!44;UBERON:0003124!2.29e-07!7;UBERON:0001008!2.58e-07!45;UBERON:0000481!9.32e-07!347;UBERON:0006555!9.75e-07!17;UBERON:0005103!9.75e-07!17;UBERON:0000083!9.75e-07!17;UBERON:0009201!9.75e-07!17;UBERON:0004819!9.75e-07!17;UBERON:0006553!9.75e-07!17;UBERON:0003074!9.75e-07!17;UBERON:0003060!9.75e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.68e-13;10!UBERON:0000158;2.68e-13;10!UBERON:0000478;2.51e-11;24!UBERON:0000074;4.19e-09;7!UBERON:0001229;4.19e-09;7!UBERON:0000305;5.74e-09;7!UBERON:0003834;4.43e-08;5!UBERON:0001533;4.43e-08;5!UBERON:0001637;7.68e-08;42!UBERON:0003509;7.68e-08;42!UBERON:0004572;7.68e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.13e-16,14;UBERON:0000158,1.13e-16,14;UBERON:0000478,1.92e-11,24;UBERON:0002049,7.32e-10,78;UBERON:0007798,7.32e-10,78;UBERON:0003124,2.64e-09,7;UBERON:0010532,3.95e-09,7;UBERON:0000074,3.95e-09,7;UBERON:0001229,3.95e-09,7;UBERON:0001230,3.95e-09,7;UBERON:0003220,3.95e-09,7;UBERON:0005749,3.95e-09,7;UBERON:0004199,3.95e-09,7;UBERON:0004209,3.95e-09,7;UBERON:0004198,3.95e-09,7;UBERON:0000305,5.31e-09,7;UBERON:0000055,6.04e-09,68;UBERON:0001637,7.67e-09,42;UBERON:0003509,7.67e-09,42;UBERON:0004572,7.67e-09,42;UBERON:0001009,1.22e-08,112;UBERON:0003914,3.77e-08,117;UBERON:0003834,4.36e-08,5;UBERON:0001533,4.36e-08,5;UBERON:0004872,4.84e-08,83;UBERON:0007500,5.33e-08,59;UBERON:0001981,5.33e-08,59;UBERON:0004537,5.33e-08,59;UBERON:0006965,5.33e-08,59;UBERON:0005103,5.46e-08,8;UBERON:0000083,5.46e-08,8;UBERON:0009201,5.46e-08,8;UBERON:0006553,5.46e-08,8;UBERON:0003074,5.46e-08,8;UBERON:0003060,5.46e-08,8;UBERON:0004871,7.06e-08,8;UBERON:0003081,4.02e-07,203;UBERON:0000080,4.23e-07,9;UBERON:0002120,4.23e-07,9;UBERON:0004875,4.23e-07,9;UBERON:0005721,4.23e-07,9;UBERON:0005754,4.23e-07,9;UBERON:0007297,4.23e-07,9;UBERON:0004535,6.24e-07,109 | |||
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| |||
|short_description=p14@TGM2 | |||
}} |
Revision as of 08:25, 12 September 2013
Short description: | p14@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_TGM2_5end |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | -153bp_to_AF311286_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | Q9BXQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.69e-15 | 19 |
glomerular endothelial cell | 9.09e-13 | 5 |
glomerular cell | 3.95e-09 | 7 |
kidney corpuscule cell | 3.95e-09 | 7 |
amniotic epithelial cell | 1.27e-08 | 2 |
vascular associated smooth muscle cell | 3.11e-08 | 32 |
smooth muscle cell of the subclavian artery | 4.36e-08 | 5 |
smooth muscle cell | 4.20e-07 | 43 |
smooth muscle myoblast | 4.20e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.85e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.