FFCP PHASE1:Hg19::chr4:77870896..77870914,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25589 | |||
|TSSclassifier=S | |||
|UniProt=D6RGI3 | |||
|association_with_transcript=0bp_to_ENST00000502584_5end | |||
|coexpression_cluster_id=C4425 | |||
|description=CAGE_peak_1_at_SEPT11_5end | |||
|id=chr4:77870896..77870914,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.74e-32!180;CL:0000057!1.23e-22!75;CL:0002620!1.20e-11!23;CL:0002371!4.66e-10!591;CL:0000680!4.67e-10!57;CL:0000056!4.67e-10!57;CL:0000355!4.67e-10!57;CL:0000144!8.04e-10!625;CL:0000187!4.89e-09!54;CL:0000222!6.11e-09!119;CL:0000136!6.14e-09!15;CL:0000393!4.23e-08!60;CL:0000211!4.23e-08!60;CL:0000183!1.65e-07!59;CL:0000048!1.71e-07!430;CL:0000723!3.96e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.20e-11;23!CL:0000057;1.09e-09;73!CL:0000136;7.90e-08;13!CL:0002320;5.62e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.42e-23,76;CL:0002620,1.20e-11,23;CL:0000680,1.79e-10,58;CL:0000056,1.79e-10,58;CL:0000355,1.79e-10,58;CL:0000187,1.93e-09,55;CL:0000222,4.48e-09,121;CL:0000136,6.14e-09,15;CL:0000048,1.21e-08,427;CL:0000393,1.78e-08,61;CL:0000211,1.78e-08,61;CL:0000723,3.03e-08,433;CL:0000034,2.27e-07,441;CL:0000192,4.35e-07,43;CL:0000514,4.35e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002097;3.89e-08;41!UBERON:0002384;1.35e-07;198!UBERON:0002199;1.49e-07;46!UBERON:0002416;1.49e-07;46 | |||
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| |||
|short_description=p1@SEPT11 | |||
}} |
Revision as of 11:48, 13 September 2013
Short description: | p1@SEPT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SEPT11_5end |
Coexpression cluster: | C4425_Fibroblast_Preadipocyte_Ewing_mesodermal_Mesenchymal_Pancreatic_neurofibroma |
Association with transcript: | 0bp_to_ENST00000502584_5end |
EntrezGene: | SEPT11 |
HGNC: | 25589 |
UniProt: | D6RGI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.42e-23 | 76 |
skin fibroblast | 1.20e-11 | 23 |
muscle precursor cell | 1.79e-10 | 58 |
myoblast | 1.79e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.79e-10 | 58 |
muscle cell | 1.93e-09 | 55 |
mesodermal cell | 4.48e-09 | 121 |
fat cell | 6.14e-09 | 15 |
multi fate stem cell | 1.21e-08 | 427 |
electrically responsive cell | 1.78e-08 | 61 |
electrically active cell | 1.78e-08 | 61 |
somatic stem cell | 3.03e-08 | 433 |
stem cell | 2.27e-07 | 441 |
smooth muscle cell | 4.35e-07 | 43 |
smooth muscle myoblast | 4.35e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.29e-13 | 73 |
somite | 1.34e-12 | 71 |
presomitic mesoderm | 1.34e-12 | 71 |
presumptive segmental plate | 1.34e-12 | 71 |
dermomyotome | 1.34e-12 | 71 |
trunk paraxial mesoderm | 1.34e-12 | 71 |
paraxial mesoderm | 1.41e-12 | 72 |
presumptive paraxial mesoderm | 1.41e-12 | 72 |
integument | 2.35e-11 | 46 |
integumental system | 2.35e-11 | 46 |
epithelial vesicle | 7.89e-11 | 78 |
multilaminar epithelium | 8.01e-11 | 83 |
skin of body | 3.85e-10 | 41 |
skeletal muscle tissue | 5.56e-10 | 62 |
striated muscle tissue | 5.56e-10 | 62 |
myotome | 5.56e-10 | 62 |
muscle tissue | 1.27e-09 | 64 |
musculature | 1.27e-09 | 64 |
musculature of body | 1.27e-09 | 64 |
surface structure | 3.98e-09 | 99 |
mesenchyme | 4.50e-09 | 160 |
entire embryonic mesenchyme | 4.50e-09 | 160 |
unilaminar epithelium | 7.81e-09 | 148 |
splanchnic layer of lateral plate mesoderm | 1.01e-08 | 83 |
vasculature | 2.39e-08 | 78 |
vascular system | 2.39e-08 | 78 |
trunk mesenchyme | 1.32e-07 | 122 |
organ component layer | 6.35e-07 | 66 |
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