FFCP PHASE1:Hg19::chr5:42993398..42993411,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=23bp_to_uc003jnb.1_5end|coexpression_cluster_id=C4502|description=CAGE_peak_5_at_uc003jnb.1_5end|id=chr5:42993398..42993411,-|ontology_enrichment_celltype=CL:0000988!4.84e-21!182;CL:0000738!8.26e-21!140;CL:0000766!8.58e-20!76;CL:0000037!1.07e-19!172;CL:0000566!1.07e-19!172;CL:0002087!1.55e-19!119;CL:0002031!2.82e-19!124;CL:0002032!6.89e-19!165;CL:0000837!6.89e-19!165;CL:0002057!6.09e-17!42;CL:0000860!9.00e-17!45;CL:0000839!2.23e-16!70;CL:0002194!4.20e-16!63;CL:0000576!4.20e-16!63;CL:0000040!4.20e-16!63;CL:0000559!4.20e-16!63;CL:0000557!5.88e-16!71;CL:0002009!1.31e-15!65;CL:0000763!7.10e-15!112;CL:0000049!7.10e-15!112;CL:0000115!6.12e-14!35;CL:0002139!1.76e-12!24;CL:0000134!1.53e-10!358;CL:0002320!1.68e-10!365;CL:0000071!1.32e-09!18;CL:0002546!1.32e-09!18;CL:0002078!7.81e-09!44;CL:0000048!2.61e-08!430;CL:0000034!1.13e-07!444;CL:0000723!1.52e-07!436;CL:0000219!2.13e-07!390;CL:0000791!5.14e-07!18;CL:0000789!5.14e-07!18;CL:0002420!5.14e-07!18;CL:0002419!5.14e-07!18;CL:0000790!5.14e-07!18|ontology_enrichment_celltype_v019=CL:0000860;6.60e-28;33!CL:0002057;6.60e-28;33!CL:0002139;1.09e-20;24!CL:0000115;4.96e-20;36!CL:0000473;5.09e-20;39!CL:0000234;5.09e-20;39!CL:0000576;1.05e-17;48!CL:0000071;1.92e-16;18!CL:0000766;8.88e-15;69!CL:0002078;6.89e-12;45!CL:0002087;4.87e-10;104!CL:0000763;8.16e-09;100!CL:0002543;1.73e-08;6!CL:0000625;6.90e-08;11!CL:0000094;2.13e-07;8!CL:0000791;2.45e-07;18!CL:0000789;2.45e-07;18!CL:0002419;2.45e-07;18!CL:0000213;4.18e-07;58!CL:0000215;4.18e-07;58!CL:0000738;7.13e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,3.41e-28,136;CL:0000766,8.38e-27,72;CL:0002031,5.17e-25,120;CL:0002032,9.12e-25,161;CL:0000837,9.12e-25,161;CL:0002087,9.82e-25,115;CL:0000037,1.15e-24,168;CL:0000115,3.03e-23,36;CL:0000988,4.54e-23,177;CL:0000860,5.53e-23,42;CL:0002057,5.53e-23,42;CL:0002139,9.05e-21,24;CL:0000473,2.10e-20,48;CL:0000234,2.10e-20,48;CL:0000839,2.62e-20,66;CL:0002194,4.36e-20,59;CL:0000576,4.36e-20,59;CL:0000040,4.36e-20,59;CL:0000559,4.36e-20,59;CL:0000557,7.94e-20,67;CL:0002009,4.60e-19,61;CL:0000763,3.68e-18,108;CL:0000049,3.68e-18,108;CL:0002078,5.53e-18,45;CL:0000071,1.25e-16,18;CL:0002546,1.25e-16,18;CL:0000213,4.36e-11,58;CL:0000215,4.36e-11,58;CL:0002543,1.57e-08,6;CL:0000625,4.38e-08,11;CL:0000791,1.76e-07,18;CL:0000789,1.76e-07,18;CL:0002420,1.76e-07,18;CL:0002419,1.76e-07,18;CL:0000790,1.76e-07,18;CL:0000094,2.34e-07,8;CL:0000838,6.98e-07,52;CL:1000413,7.57e-07,9|ontology_enrichment_development_v019=CL:0002057;1.75e-17;42!CL:0002546;1.92e-16;18!CL:0000790;2.45e-07;18!CL:0000049;6.73e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.54e-24!112;UBERON:0002390!7.42e-21!102;UBERON:0003061!7.42e-21!102;UBERON:0003081!6.14e-19!216;UBERON:0002371!1.47e-15!80;UBERON:0001474!2.46e-15!86;UBERON:0002405!5.51e-14!115;UBERON:0004765!1.86e-12!101;UBERON:0001434!1.86e-12!101;UBERON:0002384!6.34e-10!375;UBERON:0001986!1.32e-09!18;UBERON:0004638!1.32e-09!18;UBERON:0004852!1.32e-09!18;UBERON:0004535!8.61e-09!110;UBERON:0001009!6.28e-08!113;UBERON:0000487!1.15e-07!22;UBERON:0000178!5.88e-07!15;UBERON:0000179!5.88e-07!15;UBERON:0000463!5.88e-07!15|ontology_enrichment_uberon_v019=UBERON:0004638;1.92e-16;18!UBERON:0001986;1.92e-16;18!UBERON:0004852;1.92e-16;18!UBERON:0000487;1.11e-14;22!UBERON:0006914;2.70e-12;25!UBERON:0000490;1.91e-08;33!UBERON:0000178;5.89e-07;15!UBERON:0000179;5.89e-07;15!UBERON:0000463;5.89e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-25,108;UBERON:0002390,2.86e-22,98;UBERON:0003061,2.86e-22,98;UBERON:0002405,1.10e-19,93;UBERON:0003081,1.53e-17,203;UBERON:0002371,3.76e-17,76;UBERON:0004638,1.25e-16,18;UBERON:0001986,1.25e-16,18;UBERON:0004852,1.25e-16,18;UBERON:0001474,3.49e-16,82;UBERON:0000487,7.61e-15,22;UBERON:0004765,1.10e-13,90;UBERON:0006914,1.96e-12,25;UBERON:0001434,3.56e-11,100;UBERON:0000178,3.27e-07,15;UBERON:0000179,3.27e-07,15;UBERON:0000463,3.27e-07,15;UBERON:0003915,7.57e-07,9;UBERON:0004700,7.57e-07,9;UBERON:0001917,7.57e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0,0.125542639594803,0,0.0821005894499457,0,3.14691421479123,2.68680578668049,1.23852898652861,0,0,0,0,0,1.76160263600908,0,0.802177789880567,1.08505435357926,1.11957737119962,1.29557466407592,0.257575567634187,1.89017710413434,3.02300754951048,2.66842467306598,0.929716147622738,1.23350366406548,2.78735733805593,7.19230980805376,4.35473201099471,5.20260905754887,4.48169384957604,2.5819387343353,1.35426486594342,1.31769637679823,1.91034305040492,0.674170453335254,6.73384563215986,5.1348644332175,5.11469700639233,4.61791820261403,6.78176435913548,4.26224750532694,2.90209238628584,2.26954089876456,1.24564449799115,7.2862112924455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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=23bp_to_uc003jnb.1_5end | |||
|coexpression_cluster_id=C4502 | |||
|description=CAGE_peak_5_at_uc003jnb.1_5end | |||
|id=chr5:42993398..42993411,- | |||
|ontology_enrichment_celltype=CL:0000988!4.84e-21!182;CL:0000738!8.26e-21!140;CL:0000766!8.58e-20!76;CL:0000037!1.07e-19!172;CL:0000566!1.07e-19!172;CL:0002087!1.55e-19!119;CL:0002031!2.82e-19!124;CL:0002032!6.89e-19!165;CL:0000837!6.89e-19!165;CL:0002057!6.09e-17!42;CL:0000860!9.00e-17!45;CL:0000839!2.23e-16!70;CL:0002194!4.20e-16!63;CL:0000576!4.20e-16!63;CL:0000040!4.20e-16!63;CL:0000559!4.20e-16!63;CL:0000557!5.88e-16!71;CL:0002009!1.31e-15!65;CL:0000763!7.10e-15!112;CL:0000049!7.10e-15!112;CL:0000115!6.12e-14!35;CL:0002139!1.76e-12!24;CL:0000134!1.53e-10!358;CL:0002320!1.68e-10!365;CL:0000071!1.32e-09!18;CL:0002546!1.32e-09!18;CL:0002078!7.81e-09!44;CL:0000048!2.61e-08!430;CL:0000034!1.13e-07!444;CL:0000723!1.52e-07!436;CL:0000219!2.13e-07!390;CL:0000791!5.14e-07!18;CL:0000789!5.14e-07!18;CL:0002420!5.14e-07!18;CL:0002419!5.14e-07!18;CL:0000790!5.14e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.60e-28;33!CL:0002057;6.60e-28;33!CL:0002139;1.09e-20;24!CL:0000115;4.96e-20;36!CL:0000473;5.09e-20;39!CL:0000234;5.09e-20;39!CL:0000576;1.05e-17;48!CL:0000071;1.92e-16;18!CL:0000766;8.88e-15;69!CL:0002078;6.89e-12;45!CL:0002087;4.87e-10;104!CL:0000763;8.16e-09;100!CL:0002543;1.73e-08;6!CL:0000625;6.90e-08;11!CL:0000094;2.13e-07;8!CL:0000791;2.45e-07;18!CL:0000789;2.45e-07;18!CL:0002419;2.45e-07;18!CL:0000213;4.18e-07;58!CL:0000215;4.18e-07;58!CL:0000738;7.13e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.41e-28,136;CL:0000766,8.38e-27,72;CL:0002031,5.17e-25,120;CL:0002032,9.12e-25,161;CL:0000837,9.12e-25,161;CL:0002087,9.82e-25,115;CL:0000037,1.15e-24,168;CL:0000115,3.03e-23,36;CL:0000988,4.54e-23,177;CL:0000860,5.53e-23,42;CL:0002057,5.53e-23,42;CL:0002139,9.05e-21,24;CL:0000473,2.10e-20,48;CL:0000234,2.10e-20,48;CL:0000839,2.62e-20,66;CL:0002194,4.36e-20,59;CL:0000576,4.36e-20,59;CL:0000040,4.36e-20,59;CL:0000559,4.36e-20,59;CL:0000557,7.94e-20,67;CL:0002009,4.60e-19,61;CL:0000763,3.68e-18,108;CL:0000049,3.68e-18,108;CL:0002078,5.53e-18,45;CL:0000071,1.25e-16,18;CL:0002546,1.25e-16,18;CL:0000213,4.36e-11,58;CL:0000215,4.36e-11,58;CL:0002543,1.57e-08,6;CL:0000625,4.38e-08,11;CL:0000791,1.76e-07,18;CL:0000789,1.76e-07,18;CL:0002420,1.76e-07,18;CL:0002419,1.76e-07,18;CL:0000790,1.76e-07,18;CL:0000094,2.34e-07,8;CL:0000838,6.98e-07,52;CL:1000413,7.57e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-17;42!CL:0002546;1.92e-16;18!CL:0000790;2.45e-07;18!CL:0000049;6.73e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.54e-24!112;UBERON:0002390!7.42e-21!102;UBERON:0003061!7.42e-21!102;UBERON:0003081!6.14e-19!216;UBERON:0002371!1.47e-15!80;UBERON:0001474!2.46e-15!86;UBERON:0002405!5.51e-14!115;UBERON:0004765!1.86e-12!101;UBERON:0001434!1.86e-12!101;UBERON:0002384!6.34e-10!375;UBERON:0001986!1.32e-09!18;UBERON:0004638!1.32e-09!18;UBERON:0004852!1.32e-09!18;UBERON:0004535!8.61e-09!110;UBERON:0001009!6.28e-08!113;UBERON:0000487!1.15e-07!22;UBERON:0000178!5.88e-07!15;UBERON:0000179!5.88e-07!15;UBERON:0000463!5.88e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.92e-16;18!UBERON:0001986;1.92e-16;18!UBERON:0004852;1.92e-16;18!UBERON:0000487;1.11e-14;22!UBERON:0006914;2.70e-12;25!UBERON:0000490;1.91e-08;33!UBERON:0000178;5.89e-07;15!UBERON:0000179;5.89e-07;15!UBERON:0000463;5.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-25,108;UBERON:0002390,2.86e-22,98;UBERON:0003061,2.86e-22,98;UBERON:0002405,1.10e-19,93;UBERON:0003081,1.53e-17,203;UBERON:0002371,3.76e-17,76;UBERON:0004638,1.25e-16,18;UBERON:0001986,1.25e-16,18;UBERON:0004852,1.25e-16,18;UBERON:0001474,3.49e-16,82;UBERON:0000487,7.61e-15,22;UBERON:0004765,1.10e-13,90;UBERON:0006914,1.96e-12,25;UBERON:0001434,3.56e-11,100;UBERON:0000178,3.27e-07,15;UBERON:0000179,3.27e-07,15;UBERON:0000463,3.27e-07,15;UBERON:0003915,7.57e-07,9;UBERON:0004700,7.57e-07,9;UBERON:0001917,7.57e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0,0.125542639594803,0,0.0821005894499457,0,3.14691421479123,2.68680578668049,1.23852898652861,0,0,0,0,0,1.76160263600908,0,0.802177789880567,1.08505435357926,1.11957737119962,1.29557466407592,0.257575567634187,1.89017710413434,3.02300754951048,2.66842467306598,0.929716147622738,1.23350366406548,2.78735733805593,7.19230980805376,4.35473201099471,5.20260905754887,4.48169384957604,2.5819387343353,1.35426486594342,1.31769637679823,1.91034305040492,0.674170453335254,6.73384563215986,5.1348644332175,5.11469700639233,4.61791820261403,6.78176435913548,4.26224750532694,2.90209238628584,2.26954089876456,1.24564449799115,7.28621129244555,5.73631210262222,7.38442071997397,4.23779651843358,4.05105399586321,2.84816148696796,0.845021145247767,0,0,0.673971786878971,0.750884464207532,1.12507910687956,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,1.09227722252426,0,0,1.20118796110804,2.29900975981793,1.98313461835459,1.90810750907073,2.27685187643779,2.93618594685469,0.764546456250458,5.28685314316103,2.80254281490768,1.31692042387539,0.590129310341499,0.786021525498329,1.02800749499755,1.5046784585161,1.95553359980154,0.946895611469467,0,0.668462741311041,1.47302953737419,1.55073726208535,1.08321545506006,1.79327847615945,0.780356085359269,1.80881695064044,0.552700035571697,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0.566546713487831,0.383220493601921,0,1.51811815211702,1.59282707162048,1.95325036156926,0,1.50575119077773,2.04778577847069,3.74792179657038,0.473554504088034,2.46338399076314,1.61285394579786,2.67440195783507,1.44824403882799,0,2.68280343881454,0.12786256184353,0,0,0,2.3858578411533,0,0.283604451492204,0,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0.74291500265913,1.98762407366705,0,2.08284300964557,0.56530794192401,2.51699661725944,4.40188867104108,2.08994966536811,3.6178346283706,6.40379272836078,3.68192674041137,2.41697590265488,5.32190474002959,1.46437234528902,1.83831540172934,3.24056779152704,4.37568668591991,4.26605807989723,2.47745257063309,1.53316637465883,3.79706263827252,2.38162267109529,1.31780417436063,0,0,0,0.25326102332916,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.942974704487816,0.817309515567294,0.151357427644931,0,0,0.312160076830321,1.71141546463335,0.448346041655403,0.352303495931295,0.161872944368132,0.140450806702248,0.816616685019573,0.491337269247072,0.206651562351531,0,0,0,2.87447256726495,0.673344455816265,0.750711119231785,0,0,0.30648779579902,0.300476117813194,0.794025282120147,0,0.213557388818567,0.211931901159562,0.900273288253207,0,0,0.18611685633159,0.843881661206331,0.292311015483596,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.473227200159376,0.505754070234305,0,0.330881918197182,0.653638332277218,0.474541238222193,0.134831308160164,0.392442930250692,0,6.64339909162183,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,3.11980435583874,1.44331342025273,0,0,1.29929802984966,1.38895653772983,0.570762456703795,0,0,0.492434012174795,0.234004265139238,0.594524649154913,0,0,0.283550194484773,0,0,0,0,0.792435906119034,1.65862492432618,1.00883967391873,2.65109110195398,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.517086863031111,3.57656445851882,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0,2.43247561282381,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.410952645100767,0,0.560425719967636,3.15249216323084,2.15627574859517,4.74869234235069,0,0,0,0,0,1.49801404789436,2.99161459204025,3.31532410748828,0.36807447515742,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.60818530127658,0.391602314925481,0.686286847621712,0.620304078368662,0.862856803274467,1.70764092485511,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.616838775210622,0,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0,1.46139224653261,0.105551628892876,7.96133688496276,5.10281115829547,2.15915916102139,3.08454505380579,0,0.501689773854853,0,0,1.11937377361089,0.219259876645935,0,0.512900250232778,1.64007322849853,0,0.103041011647722,0.27470839445503,0.495056999523528,1.72279661398852,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0.949138274156178,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0.84251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| |||
|short_description=p5@uc003jnb.1 | |||
}} |
Revision as of 15:43, 13 September 2013
Short description: | p5@uc003jnb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_uc003jnb.1_5end |
Coexpression cluster: | C4502_CD14_large_alveolar_embryonic_clear_acute_bronchogenic |
Association with transcript: | 23bp_to_uc003jnb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.32e-25 | 108 |
hematopoietic system | 2.86e-22 | 98 |
blood island | 2.86e-22 | 98 |
immune system | 1.10e-19 | 93 |
lateral plate mesoderm | 1.53e-17 | 203 |
bone marrow | 3.76e-17 | 76 |
blood vessel endothelium | 1.25e-16 | 18 |
endothelium | 1.25e-16 | 18 |
cardiovascular system endothelium | 1.25e-16 | 18 |
bone element | 3.49e-16 | 82 |
simple squamous epithelium | 7.61e-15 | 22 |
skeletal element | 1.10e-13 | 90 |
squamous epithelium | 1.96e-12 | 25 |
skeletal system | 3.56e-11 | 100 |
blood | 3.27e-07 | 15 |
haemolymphatic fluid | 3.27e-07 | 15 |
organism substance | 3.27e-07 | 15 |
endothelial tube | 7.57e-07 | 9 |
arterial system endothelium | 7.57e-07 | 9 |
endothelium of artery | 7.57e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.