FFCP PHASE1:Hg19::chr5:142782862..142782881,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2908|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7978|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000415690_5end|coexpression_cluster_id=C4473|description=CAGE_peak_11_at_NR3C1_5end|id=chr5:142782862..142782881,-|ontology_enrichment_celltype=CL:0000738!9.69e-52!140;CL:0000037!4.55e-49!172;CL:0000566!4.55e-49!172;CL:0000988!1.92e-45!182;CL:0002032!4.03e-44!165;CL:0000837!4.03e-44!165;CL:0002031!3.74e-41!124;CL:0000766!9.92e-39!76;CL:0002087!1.06e-38!119;CL:0000557!1.91e-34!71;CL:0000763!2.76e-34!112;CL:0000049!2.76e-34!112;CL:0000839!1.77e-31!70;CL:0002009!8.96e-31!65;CL:0002057!2.49e-30!42;CL:0002194!2.14e-29!63;CL:0000576!2.14e-29!63;CL:0000040!2.14e-29!63;CL:0000559!2.14e-29!63;CL:0000860!1.31e-27!45;CL:0000134!2.30e-19!358;CL:0002320!1.90e-18!365;CL:0000048!1.28e-14!430;CL:0000034!1.16e-13!444;CL:0000723!1.74e-13!436;CL:0000219!2.23e-13!390;CL:0000838!1.57e-09!52;CL:0000542!4.44e-09!53;CL:0000051!4.44e-09!53;CL:0000945!1.43e-08!24;CL:0000826!1.43e-08!24;CL:0000094!7.92e-08!8;CL:0002393!8.67e-08!9;CL:0002397!8.67e-08!9;CL:0000236!5.73e-07!14|ontology_enrichment_celltype_v019=CL:0000860;3.25e-52;33!CL:0002057;3.25e-52;33!CL:0000576;4.51e-45;48!CL:0000473;7.61e-36;39!CL:0000234;7.61e-36;39!CL:0000766;9.86e-33;69!CL:0002087;8.01e-21;104!CL:0000094;2.92e-18;8!CL:0000738;4.06e-18;136!CL:0000763;2.88e-17;100!CL:0002393;1.67e-13;6!CL:0002397;1.67e-13;6!CL:0000081;8.93e-13;11!CL:0000988;2.43e-11;177!CL:0000236;5.18e-09;13!CL:0000219;1.40e-08;193!CL:0000775;3.19e-08;3!CL:0000784;5.18e-08;3!CL:0000767;1.99e-07;3!CL:0000226;6.49e-07;3!CL:0000842;6.49e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,1.62e-81,136;CL:0000766,8.63e-76,72;CL:0000860,1.74e-75,42;CL:0002057,1.74e-75,42;CL:0000037,6.42e-68,168;CL:0000557,4.71e-65,67;CL:0000473,2.11e-64,48;CL:0000234,2.11e-64,48;CL:0000988,2.17e-63,177;CL:0002009,1.07e-60,61;CL:0002031,1.11e-60,120;CL:0002087,6.54e-60,115;CL:0002032,3.19e-59,161;CL:0000837,3.19e-59,161;CL:0000839,1.77e-57,66;CL:0002194,3.47e-57,59;CL:0000576,3.47e-57,59;CL:0000040,3.47e-57,59;CL:0000559,3.47e-57,59;CL:0000763,1.76e-53,108;CL:0000049,1.76e-53,108;CL:0000134,1.38e-23,354;CL:0002320,1.04e-22,361;CL:0000219,1.24e-19,386;CL:0000094,2.71e-18,8;CL:0002393,3.45e-18,9;CL:0002397,3.45e-18,9;CL:0000034,1.27e-17,441;CL:0000048,1.51e-16,427;CL:0000723,5.09e-16,433;CL:0000081,8.46e-13,11;CL:0000236,3.19e-08,14;CL:0000775,3.20e-08,3;CL:0000784,5.03e-08,3;CL:0000838,8.87e-08,52;CL:0000542,1.49e-07,53;CL:0000051,1.49e-07,53;CL:0000767,1.87e-07,3;CL:0000226,5.04e-07,3;CL:0000842,5.04e-07,3|ontology_enrichment_development_v019=CL:0002057;3.61e-53;42!CL:0000049;2.92e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.15e-30!102;UBERON:0003061!1.15e-30!102;UBERON:0002371!3.11e-29!80;UBERON:0001474!5.57e-28!86;UBERON:0002193!9.12e-28!112;UBERON:0004765!1.98e-23!101;UBERON:0001434!1.98e-23!101;UBERON:0002405!8.72e-20!115;UBERON:0002384!1.03e-16!375;UBERON:0002204!2.81e-13!167;UBERON:0003081!1.03e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.52e-58,76;UBERON:0002390,4.82e-56,98;UBERON:0003061,4.82e-56,98;UBERON:0001474,7.55e-53,82;UBERON:0002193,2.45e-49,108;UBERON:0004765,7.66e-47,90;UBERON:0002405,7.97e-47,93;UBERON:0001434,1.10e-40,100;UBERON:0002384,1.62e-21,371;UBERON:0003081,1.67e-20,203;UBERON:0002204,1.59e-19,167;UBERON:0000926,2.17e-09,315;UBERON:0004120,2.17e-09,315;UBERON:0006603,2.17e-09,315|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.314843125254717,5.11373559903575,5.75744097145819,3.40595471295367,0,0,0,0.309868802321207,0.284338464974843,2.34880351467878,10.5259127621057,15.0408335602606,8.02940221648652,1.79132379391939,0.647787332037959,1.28787783817093,1.45398238779565,1.13362783106643,1.94067248950253,3.0215774797739,0.822335776043652,3.09706370895104,3.74000110018796,2.81776777182011,5.20260905754887,4.82643953031266,8.39130088658974,9.47985406160392,2.44715041405386,3.27487380069415,2.02251136000576,3.36692281607993,4.49300637906531,1.27867425159808,3.29851300186716,1.99463657621632,4.26224750532694,3.48251086354301,6.24123747160254,10.5879782329248,2.76373531782418,2.60741459210101,3.25783267057675,7.87019353423379,8.10210799172642,8.86094684834476,4.01385043992689,5.10250319916104,2.30624510059213,3.14520167210186,4.20495299956218,3.37523732063868,1.71007646244749,2.58591680358817,2.00930569141097,3.51992488922645,0.546138611262131,0,1.28019066769952,2.40237592221607,1.14950487990897,1.32208974556972,0.954053754535364,11.384259382189,7.04684627245127,9.17455747500549,5.28685314316103,3.92355994087075,1.31692042387539,0.590129310341499,2.35806457649499,2.05601498999509,0,0.651844533267181,0,0,0,0.883817722424512,0.221533894583621,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000415690_5end | |||
|coexpression_cluster_id=C4473 | |||
|description=CAGE_peak_11_at_NR3C1_5end | |||
|id=chr5:142782862..142782881,- | |||
|ontology_enrichment_celltype=CL:0000738!9.69e-52!140;CL:0000037!4.55e-49!172;CL:0000566!4.55e-49!172;CL:0000988!1.92e-45!182;CL:0002032!4.03e-44!165;CL:0000837!4.03e-44!165;CL:0002031!3.74e-41!124;CL:0000766!9.92e-39!76;CL:0002087!1.06e-38!119;CL:0000557!1.91e-34!71;CL:0000763!2.76e-34!112;CL:0000049!2.76e-34!112;CL:0000839!1.77e-31!70;CL:0002009!8.96e-31!65;CL:0002057!2.49e-30!42;CL:0002194!2.14e-29!63;CL:0000576!2.14e-29!63;CL:0000040!2.14e-29!63;CL:0000559!2.14e-29!63;CL:0000860!1.31e-27!45;CL:0000134!2.30e-19!358;CL:0002320!1.90e-18!365;CL:0000048!1.28e-14!430;CL:0000034!1.16e-13!444;CL:0000723!1.74e-13!436;CL:0000219!2.23e-13!390;CL:0000838!1.57e-09!52;CL:0000542!4.44e-09!53;CL:0000051!4.44e-09!53;CL:0000945!1.43e-08!24;CL:0000826!1.43e-08!24;CL:0000094!7.92e-08!8;CL:0002393!8.67e-08!9;CL:0002397!8.67e-08!9;CL:0000236!5.73e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-52;33!CL:0002057;3.25e-52;33!CL:0000576;4.51e-45;48!CL:0000473;7.61e-36;39!CL:0000234;7.61e-36;39!CL:0000766;9.86e-33;69!CL:0002087;8.01e-21;104!CL:0000094;2.92e-18;8!CL:0000738;4.06e-18;136!CL:0000763;2.88e-17;100!CL:0002393;1.67e-13;6!CL:0002397;1.67e-13;6!CL:0000081;8.93e-13;11!CL:0000988;2.43e-11;177!CL:0000236;5.18e-09;13!CL:0000219;1.40e-08;193!CL:0000775;3.19e-08;3!CL:0000784;5.18e-08;3!CL:0000767;1.99e-07;3!CL:0000226;6.49e-07;3!CL:0000842;6.49e-07;3 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.61e-53;42!CL:0000049;2.92e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-30!102;UBERON:0003061!1.15e-30!102;UBERON:0002371!3.11e-29!80;UBERON:0001474!5.57e-28!86;UBERON:0002193!9.12e-28!112;UBERON:0004765!1.98e-23!101;UBERON:0001434!1.98e-23!101;UBERON:0002405!8.72e-20!115;UBERON:0002384!1.03e-16!375;UBERON:0002204!2.81e-13!167;UBERON:0003081!1.03e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p11@NR3C1 | |||
}} |
Revision as of 13:45, 13 September 2013
Short description: | p11@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_NR3C1_5end |
Coexpression cluster: | C4473_Neutrophils_CD14_Eosinophils_lymphangiectasia_Dendritic_myeloma_Burkitt |
Association with transcript: | 12bp_to_ENST00000415690_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.52e-58 | 76 |
hematopoietic system | 4.82e-56 | 98 |
blood island | 4.82e-56 | 98 |
bone element | 7.55e-53 | 82 |
hemolymphoid system | 2.45e-49 | 108 |
skeletal element | 7.66e-47 | 90 |
immune system | 7.97e-47 | 93 |
skeletal system | 1.10e-40 | 100 |
connective tissue | 1.62e-21 | 371 |
lateral plate mesoderm | 1.67e-20 | 203 |
musculoskeletal system | 1.59e-19 | 167 |
mesoderm | 2.17e-09 | 315 |
mesoderm-derived structure | 2.17e-09 | 315 |
presumptive mesoderm | 2.17e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.