FFCP PHASE1:Hg19::chr5:150019857..150019868,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30672|TSSclassifier=N|UniProt=Q8N3V7|association_with_transcript=-338bp_to_NM_001109974,NM_007286_5end|coexpression_cluster_id=C140|description=CAGE_peak_18_at_SYNPO_5end|id=chr5:150019857..150019868,+|ontology_enrichment_celltype=CL:0000222!3.15e-28!119;CL:0002139!3.45e-26!24;CL:0000115!4.36e-26!35;CL:0000213!6.38e-25!57;CL:0000215!6.38e-25!57;CL:0002078!2.01e-24!44;CL:0000071!1.36e-20!18;CL:0002546!1.36e-20!18;CL:0000220!5.25e-17!246;CL:0002321!1.29e-16!248;CL:0000359!1.68e-11!32;CL:1000413!2.07e-11!9;CL:0000076!2.23e-10!62;CL:0002544!4.67e-08!6;CL:0000192!1.04e-07!42;CL:0000514!1.04e-07!42;CL:0002543!1.09e-07!6;CL:0005020!3.72e-07!6;CL:0002138!3.72e-07!6;CL:0005022!3.72e-07!6;CL:0000187!7.47e-07!54|ontology_enrichment_celltype_v019=CL:0002139;5.72e-73;24!CL:0000115;3.31e-64;36!CL:0000071;6.75e-61;18!CL:0002078;1.20e-41;45!CL:1000413;3.06e-32;9!CL:0000213;6.75e-30;58!CL:0000215;6.75e-30;58!CL:0002544;9.22e-22;6!CL:0002543;2.07e-20;6!CL:0002138;5.06e-14;6!CL:0002188;1.79e-12;5!CL:0002144;1.97e-11;3!CL:0002618;7.39e-11;3!CL:0000064;1.39e-10;3!CL:0000067;1.39e-10;3!CL:0005012;1.39e-10;3!CL:0002304;1.39e-10;3!CL:0000076;9.96e-10;63!CL:1000746;6.71e-09;7!CL:1000612;6.71e-09;7!CL:0002545;1.24e-08;2!CL:0002262;1.28e-08;2!CL:1000398;1.28e-08;2!CL:0000359;8.81e-07;32|ontology_enrichment_celltype_v019_2=CL:0000115,1.13e-77,36;CL:0002139,2.22e-73,24;CL:0002078,3.66e-65,45;CL:0000071,3.20e-61,18;CL:0002546,3.20e-61,18;CL:0000213,9.48e-49,58;CL:0000215,9.48e-49,58;CL:0000222,1.38e-39,121;CL:1000413,2.67e-32,9;CL:0002544,8.18e-22,6;CL:0002543,1.14e-20,6;CL:0002321,5.58e-19,250;CL:0000076,7.18e-16,63;CL:0005020,4.18e-14,6;CL:0002138,4.18e-14,6;CL:0005022,4.18e-14,6;CL:0002188,1.72e-12,5;CL:0000066,6.34e-12,253;CL:0002144,1.98e-11,3;CL:0002618,5.07e-11,3;CL:0000064,1.56e-10,3;CL:0000067,1.56e-10,3;CL:0005012,1.56e-10,3;CL:0002304,1.56e-10,3;CL:1000746,6.53e-09,7;CL:1000612,6.53e-09,7;CL:0002545,1.15e-08,2;CL:0002262,1.33e-08,2;CL:1000398,1.33e-08,2;CL:0000359,5.95e-07,32|ontology_enrichment_development_v019=CL:0002546;6.75e-61;18!CL:0005022;5.06e-14;6!CL:0000222;2.04e-12;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!4.52e-38!79;UBERON:0007798!4.52e-38!79;UBERON:0000055!2.10e-33!69;UBERON:0001981!2.06e-30!60;UBERON:0007500!2.06e-30!60;UBERON:0004537!2.06e-30!60;UBERON:0006965!2.06e-30!60;UBERON:0004535!1.15e-29!110;UBERON:0001009!2.75e-29!113;UBERON:0004872!1.41e-28!84;UBERON:0001986!1.36e-20!18;UBERON:0004638!1.36e-20!18;UBERON:0004852!1.36e-20!18;UBERON:0003914!1.89e-20!118;UBERON:0001637!2.81e-20!42;UBERON:0003509!2.81e-20!42;UBERON:0004572!2.81e-20!42;UBERON:0000487!4.77e-17!22;UBERON:0000477!8.59e-17!286;UBERON:0006914!5.61e-16!25;UBERON:0000119!7.85e-15!312;UBERON:0004573!1.33e-14!33;UBERON:0004571!1.33e-14!33;UBERON:0000483!3.58e-14!309;UBERON:0004111!2.13e-13!241;UBERON:0000490!3.88e-13!138;UBERON:0000025!1.86e-12!194;UBERON:0003915!2.07e-11!9;UBERON:0004700!2.07e-11!9;UBERON:0001917!2.07e-11!9;UBERON:0000467!2.53e-07!625;UBERON:0000480!3.07e-07!626;UBERON:0001638!3.29e-07!9;UBERON:0003920!3.29e-07!9;UBERON:0004582!3.29e-07!9;UBERON:0000947!4.24e-07!21;UBERON:0010191!4.24e-07!21;UBERON:0003513!9.33e-07!8|ontology_enrichment_uberon_v019=UBERON:0004638;6.75e-61;18!UBERON:0001986;6.75e-61;18!UBERON:0004852;6.75e-61;18!UBERON:0000487;6.01e-49;22!UBERON:0006914;1.34e-47;25!UBERON:0000490;3.08e-35;33!UBERON:0003915;3.06e-32;9!UBERON:0004700;3.06e-32;9!UBERON:0001917;3.06e-32;9!UBERON:0002049;2.60e-27;75!UBERON:0007798;2.60e-27;75!UBERON:0007500;6.37e-25;56!UBERON:0001981;6.37e-25;56!UBERON:0004537;6.37e-25;56!UBERON:0000055;8.84e-25;65!UBERON:0001637;4.46e-21;42!UBERON:0003509;4.46e-21;42!UBERON:0004572;4.46e-21;42!UBERON:0003914;2.61e-20;74!UBERON:0004573;2.00e-16;33!UBERON:0004571;2.00e-16;33!UBERON:0000025;8.23e-14;93!UBERON:0001638;2.18e-13;9!UBERON:0003920;2.18e-13;9!UBERON:0004582;2.18e-13;9!UBERON:0001009;4.05e-13;112!UBERON:0004535;2.23e-12;109!UBERON:0000947;4.12e-12;21!UBERON:0010191;4.12e-12;21!UBERON:0010523;1.97e-11;3!UBERON:0001915;1.97e-11;3!UBERON:0001982;1.97e-11;3!UBERON:0007625;1.38e-10;11!UBERON:0001778;1.39e-10;3!UBERON:0001775;1.39e-10;3!UBERON:0001473;1.92e-10;8!UBERON:0004536;1.92e-10;8!UBERON:0006558;1.92e-10;8!UBERON:0000119;4.28e-10;139!UBERON:0000483;3.54e-09;136!UBERON:0000074;6.71e-09;7!UBERON:0001229;6.71e-09;7!UBERON:0005800;1.24e-08;2!UBERON:0001515;1.24e-08;2!UBERON:0001281;1.28e-08;2!UBERON:0003497;1.28e-08;2!UBERON:0003909;1.28e-08;2!UBERON:0003835;1.28e-08;2!UBERON:0000353;1.58e-08;15!UBERON:0003513;2.32e-08;7!UBERON:0002465;2.71e-08;10!UBERON:0000488;4.77e-08;4!UBERON:0004111;5.04e-07;130|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.20e-61,18;UBERON:0001986,3.20e-61,18;UBERON:0004852,3.20e-61,18;UBERON:0002049,8.62e-56,78;UBERON:0007798,8.62e-56,78;UBERON:00000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30672 | |||
|TSSclassifier=N | |||
|UniProt=Q8N3V7 | |||
|association_with_transcript=-338bp_to_NM_001109974,NM_007286_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_18_at_SYNPO_5end | |||
|id=chr5:150019857..150019868,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.15e-28!119;CL:0002139!3.45e-26!24;CL:0000115!4.36e-26!35;CL:0000213!6.38e-25!57;CL:0000215!6.38e-25!57;CL:0002078!2.01e-24!44;CL:0000071!1.36e-20!18;CL:0002546!1.36e-20!18;CL:0000220!5.25e-17!246;CL:0002321!1.29e-16!248;CL:0000359!1.68e-11!32;CL:1000413!2.07e-11!9;CL:0000076!2.23e-10!62;CL:0002544!4.67e-08!6;CL:0000192!1.04e-07!42;CL:0000514!1.04e-07!42;CL:0002543!1.09e-07!6;CL:0005020!3.72e-07!6;CL:0002138!3.72e-07!6;CL:0005022!3.72e-07!6;CL:0000187!7.47e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.72e-73;24!CL:0000115;3.31e-64;36!CL:0000071;6.75e-61;18!CL:0002078;1.20e-41;45!CL:1000413;3.06e-32;9!CL:0000213;6.75e-30;58!CL:0000215;6.75e-30;58!CL:0002544;9.22e-22;6!CL:0002543;2.07e-20;6!CL:0002138;5.06e-14;6!CL:0002188;1.79e-12;5!CL:0002144;1.97e-11;3!CL:0002618;7.39e-11;3!CL:0000064;1.39e-10;3!CL:0000067;1.39e-10;3!CL:0005012;1.39e-10;3!CL:0002304;1.39e-10;3!CL:0000076;9.96e-10;63!CL:1000746;6.71e-09;7!CL:1000612;6.71e-09;7!CL:0002545;1.24e-08;2!CL:0002262;1.28e-08;2!CL:1000398;1.28e-08;2!CL:0000359;8.81e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.13e-77,36;CL:0002139,2.22e-73,24;CL:0002078,3.66e-65,45;CL:0000071,3.20e-61,18;CL:0002546,3.20e-61,18;CL:0000213,9.48e-49,58;CL:0000215,9.48e-49,58;CL:0000222,1.38e-39,121;CL:1000413,2.67e-32,9;CL:0002544,8.18e-22,6;CL:0002543,1.14e-20,6;CL:0002321,5.58e-19,250;CL:0000076,7.18e-16,63;CL:0005020,4.18e-14,6;CL:0002138,4.18e-14,6;CL:0005022,4.18e-14,6;CL:0002188,1.72e-12,5;CL:0000066,6.34e-12,253;CL:0002144,1.98e-11,3;CL:0002618,5.07e-11,3;CL:0000064,1.56e-10,3;CL:0000067,1.56e-10,3;CL:0005012,1.56e-10,3;CL:0002304,1.56e-10,3;CL:1000746,6.53e-09,7;CL:1000612,6.53e-09,7;CL:0002545,1.15e-08,2;CL:0002262,1.33e-08,2;CL:1000398,1.33e-08,2;CL:0000359,5.95e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;6.75e-61;18!CL:0005022;5.06e-14;6!CL:0000222;2.04e-12;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.52e-38!79;UBERON:0007798!4.52e-38!79;UBERON:0000055!2.10e-33!69;UBERON:0001981!2.06e-30!60;UBERON:0007500!2.06e-30!60;UBERON:0004537!2.06e-30!60;UBERON:0006965!2.06e-30!60;UBERON:0004535!1.15e-29!110;UBERON:0001009!2.75e-29!113;UBERON:0004872!1.41e-28!84;UBERON:0001986!1.36e-20!18;UBERON:0004638!1.36e-20!18;UBERON:0004852!1.36e-20!18;UBERON:0003914!1.89e-20!118;UBERON:0001637!2.81e-20!42;UBERON:0003509!2.81e-20!42;UBERON:0004572!2.81e-20!42;UBERON:0000487!4.77e-17!22;UBERON:0000477!8.59e-17!286;UBERON:0006914!5.61e-16!25;UBERON:0000119!7.85e-15!312;UBERON:0004573!1.33e-14!33;UBERON:0004571!1.33e-14!33;UBERON:0000483!3.58e-14!309;UBERON:0004111!2.13e-13!241;UBERON:0000490!3.88e-13!138;UBERON:0000025!1.86e-12!194;UBERON:0003915!2.07e-11!9;UBERON:0004700!2.07e-11!9;UBERON:0001917!2.07e-11!9;UBERON:0000467!2.53e-07!625;UBERON:0000480!3.07e-07!626;UBERON:0001638!3.29e-07!9;UBERON:0003920!3.29e-07!9;UBERON:0004582!3.29e-07!9;UBERON:0000947!4.24e-07!21;UBERON:0010191!4.24e-07!21;UBERON:0003513!9.33e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.75e-61;18!UBERON:0001986;6.75e-61;18!UBERON:0004852;6.75e-61;18!UBERON:0000487;6.01e-49;22!UBERON:0006914;1.34e-47;25!UBERON:0000490;3.08e-35;33!UBERON:0003915;3.06e-32;9!UBERON:0004700;3.06e-32;9!UBERON:0001917;3.06e-32;9!UBERON:0002049;2.60e-27;75!UBERON:0007798;2.60e-27;75!UBERON:0007500;6.37e-25;56!UBERON:0001981;6.37e-25;56!UBERON:0004537;6.37e-25;56!UBERON:0000055;8.84e-25;65!UBERON:0001637;4.46e-21;42!UBERON:0003509;4.46e-21;42!UBERON:0004572;4.46e-21;42!UBERON:0003914;2.61e-20;74!UBERON:0004573;2.00e-16;33!UBERON:0004571;2.00e-16;33!UBERON:0000025;8.23e-14;93!UBERON:0001638;2.18e-13;9!UBERON:0003920;2.18e-13;9!UBERON:0004582;2.18e-13;9!UBERON:0001009;4.05e-13;112!UBERON:0004535;2.23e-12;109!UBERON:0000947;4.12e-12;21!UBERON:0010191;4.12e-12;21!UBERON:0010523;1.97e-11;3!UBERON:0001915;1.97e-11;3!UBERON:0001982;1.97e-11;3!UBERON:0007625;1.38e-10;11!UBERON:0001778;1.39e-10;3!UBERON:0001775;1.39e-10;3!UBERON:0001473;1.92e-10;8!UBERON:0004536;1.92e-10;8!UBERON:0006558;1.92e-10;8!UBERON:0000119;4.28e-10;139!UBERON:0000483;3.54e-09;136!UBERON:0000074;6.71e-09;7!UBERON:0001229;6.71e-09;7!UBERON:0005800;1.24e-08;2!UBERON:0001515;1.24e-08;2!UBERON:0001281;1.28e-08;2!UBERON:0003497;1.28e-08;2!UBERON:0003909;1.28e-08;2!UBERON:0003835;1.28e-08;2!UBERON:0000353;1.58e-08;15!UBERON:0003513;2.32e-08;7!UBERON:0002465;2.71e-08;10!UBERON:0000488;4.77e-08;4!UBERON:0004111;5.04e-07;130 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0.612002073732759,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,1.13441780596881,1.55210578223795,2.45937399940753,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,6.36039703573456,5.16140757063675,4.16568601929113,1.69592382577203,7.97048928798821,7.70330517432189,6.47884396264113,1.8089173141853,1.77883131343355,3.01248551488203,2.41697590265488,5.32190474002959,2.19655851793353,4.77962004449629,10.5318453224629,2.76829157680647,2.69435247151404,1.46394924628319,3.06633274931766,2.84779697870439,2.38162267109529,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,1.06748995729705,4.68668341992604,0,0.538842688278752,0.980771418680752,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0.213557388818567,0,0.600182192168805,0.309157587715317,0.257640540045629,0,0.337552664482532,0.389748020644795,0.504867548488229,0,0,0,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0.38474715694639,8.11971000087113,4.20725321410337,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,4.3299402607582,0,2.23076519048061,3.03169540298255,0.462985512576611,1.33177906564219,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0,0.229628896329213,0,0,0,0,0,0,0,13.6480060885076,3.2317804002538,5.18198198645135,38.5568131725723,0,0,0,0,0,0,0,0,1.64007322849853,0.325378394664303,0,0,0.165018999841176,1.72279661398852,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.960950336825531,0.638063562472921,0,0,0,1.3940745403212,1.84820148105653,2.66153015158511,0,2.03856641014312,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0,0,0,0,0.808729926293264,3.17020642346017,2.10629228119491,0,0.731140468893853,2.11300293513511,0,0.141405431953713,0,0.551365343546124,1.32687795048244,0.876901770507525,0,0,0.405820753925408,1.54911749049875,0.845086807596724,0.143411352204052,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0.920418142519393,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,1.37588825977293,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0.685209623233754,0.596143835108969,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0.951329442515298,1.15063130943567,0.611989305817931,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0.453248366080503,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0.999843263696853,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0.621748802331122,0.443565449968902,0.477890301491107,0,0.465788870628778,0,0,0,0,0,0.406870733204662,0,0.322231671127465,0,0,0.400027764663154,0,0,1.26184898228651,0.770479321629213,0.643324774124777,0,0.226705925512272,0.694567422971502,0,0.179088841081487,0.926404341482917,0.219284049578707,0.176689145945881,0,0.168942440653073,0.512483037175893,0.345430341731199,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0.183428598521679,0,0.762764190934334,0,0,0.300841313397029,0.80682027481408,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0.342976018874837,0.339848664884159,0,1.06374456795571,0.111231401892069,0.078493092850514,0.157115589916002,0,0,1.94334832096759,0,0.571812353413251,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.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| |||
|short_description=p18@SYNPO | |||
}} |
Revision as of 14:07, 13 September 2013
Short description: | p18@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_SYNPO_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -338bp_to_NM_001109974, NM_007286_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | Q8N3V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.