FFCP PHASE1:Hg19::chr6:11779174..11779185,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84830|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21214|TSSclassifier=S|UniProt=Q5THW1,Q96IZ2|association_with_transcript=94bp_to_ENST00000379413,NM_001143948,NM_032744,uc003nab.2,uc011dip.1_5end|coexpression_cluster_id=C1968|description=CAGE_peak_9_at_C6orf105_5end|id=chr6:11779174..11779185,-|ontology_enrichment_celltype=CL:0000990!1.05e-15!8;CL:0002586!4.11e-13!3;CL:0002619!5.23e-13!3;CL:0000451!9.98e-13!10;CL:0000149!6.11e-10!4;CL:0000453!2.68e-08!5|ontology_enrichment_celltype_v019=CL:0000453;2.57e-23;5!CL:0002619;3.48e-17;3!CL:0002586;3.48e-17;3!CL:0000990;3.04e-13;8!CL:0000149;3.87e-13;4!CL:0000451;6.10e-11;10|ontology_enrichment_celltype_v019_2=CL:0000453,2.57e-23,5;CL:0002586,2.71e-17,3;CL:0002619,3.78e-17,3;CL:0000990,3.04e-13,8;CL:0000149,3.21e-13,4;CL:0000451,6.10e-11,10|ontology_enrichment_development_v019=UBERON:0001045;5.49e-14;1!UBERON:0005754;8.57e-14;1!UBERON:0007297;1.54e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000966!1.37e-13!5;UBERON:0005388!1.37e-13!5;UBERON:0001802!1.37e-13!5;UBERON:0001781!4.11e-13!3;UBERON:0001782!4.11e-13!3;UBERON:0005424!4.11e-13!3;UBERON:0006947!6.65e-13!3;UBERON:0004054!6.65e-13!3;UBERON:0000160!2.46e-10!27;UBERON:0005904!8.73e-10!4;UBERON:0007023!8.51e-08!115;UBERON:0001155!1.09e-07!9;UBERON:0005409!1.15e-07!35|ontology_enrichment_uberon_v019=UBERON:0000966;1.24e-22;5!UBERON:0005388;1.24e-22;5!UBERON:0001802;1.24e-22;5!UBERON:0006947;1.51e-17;3!UBERON:0004054;1.51e-17;3!UBERON:0000160;1.77e-17;17!UBERON:0001781;3.48e-17;3!UBERON:0001782;3.48e-17;3!UBERON:0001154;5.49e-14;1!UBERON:0001153;5.49e-14;1!UBERON:0009854;5.49e-14;1!UBERON:0001000;8.57e-14;1!UBERON:0000998;8.57e-14;1!UBERON:0006868;8.57e-14;1!UBERON:0005352;8.57e-14;1!UBERON:0005409;1.12e-13;22!UBERON:0005904;2.08e-13;4!UBERON:0001155;2.57e-13;9!UBERON:0000059;5.33e-11;11!UBERON:0002108;5.85e-11;4!UBERON:0004921;4.09e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.95e-19,6;UBERON:0005388,4.95e-19,6;UBERON:0001802,4.95e-19,6;UBERON:0006947,1.18e-17,3;UBERON:0004054,1.18e-17,3;UBERON:0000160,1.90e-17,17;UBERON:0001782,2.71e-17,3;UBERON:0005424,2.71e-17,3;UBERON:0001154,5.85e-14,1;UBERON:0001153,5.85e-14,1;UBERON:0001045,5.85e-14,1;UBERON:0000998,6.65e-14,1;UBERON:0006868,6.65e-14,1;UBERON:0001000,7.55e-14,1;UBERON:0005352,7.55e-14,1;UBERON:0005904,1.72e-13,4;UBERON:0001155,2.57e-13,9;UBERON:0001781,3.21e-13,4;UBERON:0005409,4.49e-12,25;UBERON:0000059,5.33e-11,11;UBERON:0002108,6.47e-11,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.895661896959697,1.29557466407592,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,0.984043937099117,1.62689197332152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0,3.03912307084262,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,9.95261931078505,3.89213283814692,0.611030144933625,0,0,0,0,0,0,0,0,0,2.76209081994573,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43039019169982,2.65729680626726,4.08913485639611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,2.57315559035963,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48915739187391,0.655678681511872,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84830 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21214 | |||
|TSSclassifier=S | |||
|UniProt=Q5THW1,Q96IZ2 | |||
|association_with_transcript=94bp_to_ENST00000379413,NM_001143948,NM_032744,uc003nab.2,uc011dip.1_5end | |||
|coexpression_cluster_id=C1968 | |||
|description=CAGE_peak_9_at_C6orf105_5end | |||
|id=chr6:11779174..11779185,- | |||
|ontology_enrichment_celltype=CL:0000990!1.05e-15!8;CL:0002586!4.11e-13!3;CL:0002619!5.23e-13!3;CL:0000451!9.98e-13!10;CL:0000149!6.11e-10!4;CL:0000453!2.68e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.57e-23;5!CL:0002619;3.48e-17;3!CL:0002586;3.48e-17;3!CL:0000990;3.04e-13;8!CL:0000149;3.87e-13;4!CL:0000451;6.10e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.57e-23,5;CL:0002586,2.71e-17,3;CL:0002619,3.78e-17,3;CL:0000990,3.04e-13,8;CL:0000149,3.21e-13,4;CL:0000451,6.10e-11,10 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.49e-14;1!UBERON:0005754;8.57e-14;1!UBERON:0007297;1.54e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.37e-13!5;UBERON:0005388!1.37e-13!5;UBERON:0001802!1.37e-13!5;UBERON:0001781!4.11e-13!3;UBERON:0001782!4.11e-13!3;UBERON:0005424!4.11e-13!3;UBERON:0006947!6.65e-13!3;UBERON:0004054!6.65e-13!3;UBERON:0000160!2.46e-10!27;UBERON:0005904!8.73e-10!4;UBERON:0007023!8.51e-08!115;UBERON:0001155!1.09e-07!9;UBERON:0005409!1.15e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.24e-22;5!UBERON:0005388;1.24e-22;5!UBERON:0001802;1.24e-22;5!UBERON:0006947;1.51e-17;3!UBERON:0004054;1.51e-17;3!UBERON:0000160;1.77e-17;17!UBERON:0001781;3.48e-17;3!UBERON:0001782;3.48e-17;3!UBERON:0001154;5.49e-14;1!UBERON:0001153;5.49e-14;1!UBERON:0009854;5.49e-14;1!UBERON:0001000;8.57e-14;1!UBERON:0000998;8.57e-14;1!UBERON:0006868;8.57e-14;1!UBERON:0005352;8.57e-14;1!UBERON:0005409;1.12e-13;22!UBERON:0005904;2.08e-13;4!UBERON:0001155;2.57e-13;9!UBERON:0000059;5.33e-11;11!UBERON:0002108;5.85e-11;4!UBERON:0004921;4.09e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.95e-19,6;UBERON:0005388,4.95e-19,6;UBERON:0001802,4.95e-19,6;UBERON:0006947,1.18e-17,3;UBERON:0004054,1.18e-17,3;UBERON:0000160,1.90e-17,17;UBERON:0001782,2.71e-17,3;UBERON:0005424,2.71e-17,3;UBERON:0001154,5.85e-14,1;UBERON:0001153,5.85e-14,1;UBERON:0001045,5.85e-14,1;UBERON:0000998,6.65e-14,1;UBERON:0006868,6.65e-14,1;UBERON:0001000,7.55e-14,1;UBERON:0005352,7.55e-14,1;UBERON:0005904,1.72e-13,4;UBERON:0001155,2.57e-13,9;UBERON:0001781,3.21e-13,4;UBERON:0005409,4.49e-12,25;UBERON:0000059,5.33e-11,11;UBERON:0002108,6.47e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.895661896959697,1.29557466407592,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,0.984043937099117,1.62689197332152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0,3.03912307084262,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,9.95261931078505,3.89213283814692,0.611030144933625,0,0,0,0,0,0,0,0,0,2.76209081994573,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43039019169982,2.65729680626726,4.08913485639611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,2.57315559035963,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48915739187391,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@C6orf105 | |||
}} |
Revision as of 17:36, 13 September 2013
Short description: | p9@C6orf105 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_C6orf105_5end |
Coexpression cluster: | C1968_migratory_CD14_small_seminal_ductus_retina_Retinal |
Association with transcript: | 94bp_to_ENST00000379413, NM_001143948, NM_032744, uc003nab.2, uc011dip.1_5end |
EntrezGene: | C6orf105 |
HGNC: | 21214 |
UniProt: | Q5THW1Q96IZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.57e-23 | 5 |
retinal pigment epithelial cell | 2.71e-17 | 3 |
adult endothelial progenitor cell | 3.78e-17 | 3 |
conventional dendritic cell | 3.04e-13 | 8 |
visual pigment cell | 3.21e-13 | 4 |
dendritic cell | 6.10e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
retina | 4.95e-19 | 6 |
photoreceptor array | 4.95e-19 | 6 |
posterior segment of eyeball | 4.95e-19 | 6 |
male genital duct | 1.18e-17 | 3 |
internal male genitalia | 1.18e-17 | 3 |
intestine | 1.90e-17 | 17 |
pigmented layer of retina | 2.71e-17 | 3 |
presumptive retinal pigmented epithelium | 2.71e-17 | 3 |
vermiform appendix | 5.85e-14 | 1 |
caecum | 5.85e-14 | 1 |
midgut | 5.85e-14 | 1 |
seminal vesicle | 6.65e-14 | 1 |
seminal fluid secreting gland | 6.65e-14 | 1 |
vas deferens | 7.55e-14 | 1 |
spermatic cord | 7.55e-14 | 1 |
duct of male reproductive system | 1.72e-13 | 4 |
colon | 2.57e-13 | 9 |
layer of retina | 3.21e-13 | 4 |
gastrointestinal system | 4.49e-12 | 25 |
large intestine | 5.33e-11 | 11 |
small intestine | 6.47e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.