FFCP PHASE1:Hg19::chr6:144980477..144980514,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7402|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12635|TSSclassifier=N|UniProt=Q5T098|association_with_transcript=-465bp_to_ENST00000367525_5end|coexpression_cluster_id=C92|description=CAGE_peak_4_at_UTRN_5end|id=chr6:144980477..144980514,+|ontology_enrichment_celltype=CL:0002057!3.64e-41!42;CL:0000766!4.84e-40!76;CL:0002194!5.55e-38!63;CL:0000576!5.55e-38!63;CL:0000040!5.55e-38!63;CL:0000559!5.55e-38!63;CL:0000860!4.69e-37!45;CL:0002009!4.38e-36!65;CL:0000839!2.52e-35!70;CL:0000557!1.74e-34!71;CL:0000738!7.95e-31!140;CL:0002087!2.38e-28!119;CL:0000763!5.96e-25!112;CL:0000049!5.96e-25!112;CL:0002031!6.97e-25!124;CL:0000037!4.05e-24!172;CL:0000566!4.05e-24!172;CL:0000988!1.78e-22!182;CL:0002032!4.17e-21!165;CL:0000837!4.17e-21!165;CL:0002393!1.21e-10!9;CL:0002397!1.21e-10!9;CL:0002320!1.04e-07!365;CL:0000134!8.23e-07!358|ontology_enrichment_celltype_v019=CL:0000860;1.13e-52;33!CL:0002057;1.13e-52;33!CL:0000576;2.48e-47;48!CL:0000473;4.28e-40;39!CL:0000234;4.28e-40;39!CL:0000766;2.01e-29;69!CL:0002087;5.68e-15;104!CL:0000763;7.75e-14;100!CL:0002393;9.40e-13;6!CL:0002397;9.40e-13;6!CL:0000738;1.54e-09;136!CL:0002322;5.99e-08;5!CL:0000988;1.48e-07;177!CL:0000875;2.02e-07;3!CL:0002396;2.02e-07;3!CL:0000226;6.86e-07;3!CL:0000842;6.86e-07;3!CL:0000767;7.85e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,9.13e-76,42;CL:0002057,9.13e-76,42;CL:0000473,1.06e-70,48;CL:0000234,1.06e-70,48;CL:0002194,1.86e-64,59;CL:0000576,1.86e-64,59;CL:0000040,1.86e-64,59;CL:0000559,1.86e-64,59;CL:0000766,1.07e-62,72;CL:0002009,7.45e-62,61;CL:0000839,4.96e-56,66;CL:0000557,5.71e-55,67;CL:0000738,1.20e-40,136;CL:0000763,2.60e-39,108;CL:0000049,2.60e-39,108;CL:0002087,3.82e-39,115;CL:0002031,7.61e-32,120;CL:0000037,1.53e-31,168;CL:0000988,5.84e-29,177;CL:0002032,2.67e-27,161;CL:0000837,2.67e-27,161;CL:0002393,1.72e-18,9;CL:0002397,1.72e-18,9;CL:0000134,6.32e-09,354;CL:0002320,7.05e-09,361;CL:0000219,6.25e-08,386;CL:0002322,6.73e-08,5;CL:0000875,2.03e-07,3;CL:0002396,2.03e-07,3;CL:0000226,6.88e-07,3;CL:0000842,6.88e-07,3;CL:0000767,7.87e-07,3;CL:0000034,8.97e-07,441|ontology_enrichment_development_v019=CL:0002057;8.09e-54;42!CL:0000049;1.51e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.54e-37!102;UBERON:0003061!1.54e-37!102;UBERON:0002193!6.29e-35!112;UBERON:0002371!6.32e-28!80;UBERON:0001474!6.10e-26!86;UBERON:0004765!3.25e-24!101;UBERON:0001434!3.25e-24!101;UBERON:0002405!3.35e-23!115;UBERON:0002204!5.03e-10!167;UBERON:0003081!5.19e-10!216;UBERON:0000178!2.15e-08!15;UBERON:0000179!2.15e-08!15;UBERON:0000463!2.15e-08!15;UBERON:0007023!3.23e-08!115;UBERON:0002384!3.54e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-15;15!UBERON:0000179;1.57e-15;15!UBERON:0000463;1.57e-15;15!UBERON:0002390;5.42e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.49e-63,98;UBERON:0003061,8.49e-63,98;UBERON:0002193,3.02e-59,108;UBERON:0002371,1.13e-46,76;UBERON:0002405,1.41e-44,93;UBERON:0001474,3.75e-42,82;UBERON:0004765,9.67e-39,90;UBERON:0001434,2.42e-33,100;UBERON:0003081,2.01e-22,203;UBERON:0002204,1.42e-16,167;UBERON:0000178,1.38e-15,15;UBERON:0000179,1.38e-15,15;UBERON:0000463,1.38e-15,15;UBERON:0000926,6.75e-11,315;UBERON:0004120,6.75e-11,315;UBERON:0006603,6.75e-11,315;UBERON:0002384,3.61e-08,371|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,16.521299627654,11.5148819429164,26.1639248404168,0,0,0,0,0,0,18.8358438900838,18.450089167253,21.4840762008693,5.37397138175818,5.83008598834163,5.15151135268373,28.7888512783538,33.630958988304,53.6110775225074,17.4321777679263,11.1015329765893,17.962969511916,10.9323109082417,16.6504459243915,29.5602787360732,6.89491361473237,14.846147722428,12.1883837934908,8.094420600332,12.0078706025452,25.1690302578495,7.03992952453076,9.9487998393589,15.344091019177,22.4298884126967,31.7147215618395,50.7207453133906,5.80418477257168,3.97169657283798,4.9825779919646,5.7787193009051,10.9511412868242,23.2392063834475,1.81619850790011,6.99727508376373,12.9749578850763,212.522818029813,180.713654970287,165.630329951617,48.5259686552859,49.1078439591726,47.0925969022445,137.091129739541,172.460759131611,170.973647923697,0,0,0,2.13365111283254,0,0,0,0.954053754535364,0,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0.393419540227666,1.17903228824749,0.205601498999509,0,0.651844533267181,0,0,0,0.294605907474837,0.443067789167242,0.541607727530031,0,0,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,1.01207876807801,0.318565414324097,0,0,3.01150238155546,2.68771883424279,0,2.8413270245282,0.821127996921047,0.403213486449465,0,0,0,0,0,0,0,0.144846518960824,0,0,1.89069634328136,1.99556457716308,0.966182642624386,0.589405839739707,0,0,0.97364218096405,0.348259474598534,0.664789802594326,1.43094374583205,1.14398982156026,0.37145750132956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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12635 | |||
|TSSclassifier=N | |||
|UniProt=Q5T098 | |||
|association_with_transcript=-465bp_to_ENST00000367525_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_4_at_UTRN_5end | |||
|id=chr6:144980477..144980514,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.64e-41!42;CL:0000766!4.84e-40!76;CL:0002194!5.55e-38!63;CL:0000576!5.55e-38!63;CL:0000040!5.55e-38!63;CL:0000559!5.55e-38!63;CL:0000860!4.69e-37!45;CL:0002009!4.38e-36!65;CL:0000839!2.52e-35!70;CL:0000557!1.74e-34!71;CL:0000738!7.95e-31!140;CL:0002087!2.38e-28!119;CL:0000763!5.96e-25!112;CL:0000049!5.96e-25!112;CL:0002031!6.97e-25!124;CL:0000037!4.05e-24!172;CL:0000566!4.05e-24!172;CL:0000988!1.78e-22!182;CL:0002032!4.17e-21!165;CL:0000837!4.17e-21!165;CL:0002393!1.21e-10!9;CL:0002397!1.21e-10!9;CL:0002320!1.04e-07!365;CL:0000134!8.23e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-52;33!CL:0002057;1.13e-52;33!CL:0000576;2.48e-47;48!CL:0000473;4.28e-40;39!CL:0000234;4.28e-40;39!CL:0000766;2.01e-29;69!CL:0002087;5.68e-15;104!CL:0000763;7.75e-14;100!CL:0002393;9.40e-13;6!CL:0002397;9.40e-13;6!CL:0000738;1.54e-09;136!CL:0002322;5.99e-08;5!CL:0000988;1.48e-07;177!CL:0000875;2.02e-07;3!CL:0002396;2.02e-07;3!CL:0000226;6.86e-07;3!CL:0000842;6.86e-07;3!CL:0000767;7.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.13e-76,42;CL:0002057,9.13e-76,42;CL:0000473,1.06e-70,48;CL:0000234,1.06e-70,48;CL:0002194,1.86e-64,59;CL:0000576,1.86e-64,59;CL:0000040,1.86e-64,59;CL:0000559,1.86e-64,59;CL:0000766,1.07e-62,72;CL:0002009,7.45e-62,61;CL:0000839,4.96e-56,66;CL:0000557,5.71e-55,67;CL:0000738,1.20e-40,136;CL:0000763,2.60e-39,108;CL:0000049,2.60e-39,108;CL:0002087,3.82e-39,115;CL:0002031,7.61e-32,120;CL:0000037,1.53e-31,168;CL:0000988,5.84e-29,177;CL:0002032,2.67e-27,161;CL:0000837,2.67e-27,161;CL:0002393,1.72e-18,9;CL:0002397,1.72e-18,9;CL:0000134,6.32e-09,354;CL:0002320,7.05e-09,361;CL:0000219,6.25e-08,386;CL:0002322,6.73e-08,5;CL:0000875,2.03e-07,3;CL:0002396,2.03e-07,3;CL:0000226,6.88e-07,3;CL:0000842,6.88e-07,3;CL:0000767,7.87e-07,3;CL:0000034,8.97e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.09e-54;42!CL:0000049;1.51e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-37!102;UBERON:0003061!1.54e-37!102;UBERON:0002193!6.29e-35!112;UBERON:0002371!6.32e-28!80;UBERON:0001474!6.10e-26!86;UBERON:0004765!3.25e-24!101;UBERON:0001434!3.25e-24!101;UBERON:0002405!3.35e-23!115;UBERON:0002204!5.03e-10!167;UBERON:0003081!5.19e-10!216;UBERON:0000178!2.15e-08!15;UBERON:0000179!2.15e-08!15;UBERON:0000463!2.15e-08!15;UBERON:0007023!3.23e-08!115;UBERON:0002384!3.54e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-15;15!UBERON:0000179;1.57e-15;15!UBERON:0000463;1.57e-15;15!UBERON:0002390;5.42e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.49e-63,98;UBERON:0003061,8.49e-63,98;UBERON:0002193,3.02e-59,108;UBERON:0002371,1.13e-46,76;UBERON:0002405,1.41e-44,93;UBERON:0001474,3.75e-42,82;UBERON:0004765,9.67e-39,90;UBERON:0001434,2.42e-33,100;UBERON:0003081,2.01e-22,203;UBERON:0002204,1.42e-16,167;UBERON:0000178,1.38e-15,15;UBERON:0000179,1.38e-15,15;UBERON:0000463,1.38e-15,15;UBERON:0000926,6.75e-11,315;UBERON:0004120,6.75e-11,315;UBERON:0006603,6.75e-11,315;UBERON:0002384,3.61e-08,371 | |||
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| |||
|short_description=p4@UTRN | |||
}} |
Revision as of 18:32, 13 September 2013
Short description: | p4@UTRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_UTRN_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -465bp_to_ENST00000367525_5end |
EntrezGene: | UTRN |
HGNC: | 12635 |
UniProt: | Q5T098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.49e-63 | 98 |
blood island | 8.49e-63 | 98 |
hemolymphoid system | 3.02e-59 | 108 |
bone marrow | 1.13e-46 | 76 |
immune system | 1.41e-44 | 93 |
bone element | 3.75e-42 | 82 |
skeletal element | 9.67e-39 | 90 |
skeletal system | 2.42e-33 | 100 |
lateral plate mesoderm | 2.01e-22 | 203 |
musculoskeletal system | 1.42e-16 | 167 |
blood | 1.38e-15 | 15 |
haemolymphatic fluid | 1.38e-15 | 15 |
organism substance | 1.38e-15 | 15 |
mesoderm | 6.75e-11 | 315 |
mesoderm-derived structure | 6.75e-11 | 315 |
presumptive mesoderm | 6.75e-11 | 315 |
connective tissue | 3.61e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.