FFCP PHASE1:Hg19::chr7:1084206..1084255,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115330|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21718|TSSclassifier=S|UniProt=C9JAQ6|association_with_transcript=0bp_to_ENST00000444847,ENST00000481403,uc003sjw.2_5end|coexpression_cluster_id=C14|description=CAGE_peak_1_at_GPR146_5end|id=chr7:1084206..1084255,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.74e-39!115;UBERON:0001049!1.67e-11!57;UBERON:0005068!1.67e-11!57;UBERON:0006241!1.67e-11!57;UBERON:0007135!1.67e-11!57;UBERON:0000073!1.21e-08!94;UBERON:0001016!1.21e-08!94;UBERON:0005743!1.57e-08!86;UBERON:0003080!2.46e-08!42;UBERON:0001017!5.00e-08!82;UBERON:0002780!7.53e-08!41;UBERON:0001890!7.53e-08!41;UBERON:0006240!7.53e-08!41;UBERON:0000955!1.06e-07!69;UBERON:0006238!1.06e-07!69;UBERON:0002616!1.49e-07!59|ontology_enrichment_uberon_v019=UBERON:0007023;3.98e-11;114!UBERON:0000073;6.86e-07;53!UBERON:0002616;6.86e-07;53!UBERON:0002780;9.39e-07;41!UBERON:0001890;9.39e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-43,114;UBERON:0001049,1.18e-12,56;UBERON:0005068,1.18e-12,56;UBERON:0006241,1.18e-12,56;UBERON:0007135,1.18e-12,56;UBERON:0000073,1.52e-11,53;UBERON:0002616,1.52e-11,53;UBERON:0002780,3.82e-09,41;UBERON:0001890,3.82e-09,41;UBERON:0003080,3.82e-09,41;UBERON:0006240,3.82e-09,41;UBERON:0001017,6.16e-09,81;UBERON:0001016,6.46e-09,89;UBERON:0000955,8.43e-09,68;UBERON:0006238,8.43e-09,68;UBERON:0001893,7.39e-08,34;UBERON:0003528,9.85e-08,34;UBERON:0002020,9.85e-08,34;UBERON:0003075,2.59e-07,82;UBERON:0007284,2.59e-07,82;UBERON:0002791,5.42e-07,32;UBERON:0001869,5.67e-07,32|phase1_expression=0.726713517082227,3.63970890614671,0.704772020479856,1.0007329835313,1.78784437770915,0.872338524100369,0,1.89515962028049,3.65659879479774,0.982935746006035,0.697801167972428,0,0,0.495065411840187,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,3.97349709889347,1.55991119954897,1.41679406364623,0.393364276848904,0.767658796194425,2.94150634300544,0,0,0,0.232401601740905,0.426507697462265,1.46800219667424,0.553995408531877,1.00272223735071,2.38711957787437,2.01523926815932,2.59114932815184,2.57575567634187,1.16318591023652,2.26725566213286,3.39617685662943,0.464858073811369,1.23350366406548,1.23882548358041,0.575384784644301,1.5369642391746,0.945928919554341,1.03423704220986,2.5819387343353,1.35426486594342,0.564727018627814,4.63940455098338,0.449446968890169,0.306083892370903,1.28371610830437,0.639337125799041,0.989553900560148,3.98927315243264,1.27867425159808,0.580418477257168,0.56738522469114,0,0.75374599577023,2.08593167368081,0.65156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0.845021145247767,0.637812899895131,0,0.336985893439485,0,0.16072558669708,0.570025487482497,0.99458338599545,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,5.12291672198504,6.45960908308033,13.379562984383,3.96513985737078,2.24203425192614,0.263384084775077,5.31116379307349,4.71612915298998,4.72883447698871,5.18278135711102,2.28145586643513,4.2610302516126,1.94826728407911,7.35309015442146,5.30290633454707,11.0766947291811,4.06205795647523,8.06975314271754,8.45385759139208,3.4531959966772,2.76350017785848,4.05724320029073,4.44859689486181,3.47803076516627,5.22677619024884,3.85251765171725,3.44898444241729,4.12352934579156,0.506039384039006,3.50421955756506,0.651083453856419,0.950452044448374,2.25862678616659,1.53583933385302,1.24930726552346,1.18388626022008,0,1.61285394579786,1.33720097891754,1.15859523106239,0,0,4.2194645408365,0.722878304769133,2.00535164254356,1.59331170856906,2.3858578411533,6.32625331393427,0.283604451492204,0.443458794925128,0.087834785693126,4.78073625566651,0,0.741568885568859,18.1746540446623,20.7214387386128,17.1515769069336,4.5313218618015,2.28797964312051,1.48583000531826,2.18638648103376,0,2.77712401286075,0,0.419499436209906,0.825354125820202,1.46296476575767,4.39308490587859,2.84613010149368,5.02080919147005,2.81980521976403,0,7.56592378399325,0,1.62028389576352,1.51809538082936,2.46982309888787,1.80178368773316,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,3.47880366186723,0.379891534993739,0.397227542439656,0.286836620748814,0.709336764396714,2.24271040056923,1.06748995729705,1.72667283892012,0.933633106199299,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0.413303124703062,0,0.494533858557114,0,0,0,0,0,0,0,0,0.680593098960126,0.358779271377724,0.640672166455702,3.39091041855299,0.300091096084402,0.721367704669072,0,0.744467425326359,1.18143432568886,1.07180705677318,0.504867548488229,0.920498986422993,0.646584227275248,0.355009592516614,0.705264687593482,1.1869241461734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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21718 | |||
|TSSclassifier=S | |||
|UniProt=C9JAQ6 | |||
|association_with_transcript=0bp_to_ENST00000444847,ENST00000481403,uc003sjw.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_GPR146_5end | |||
|id=chr7:1084206..1084255,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-39!115;UBERON:0001049!1.67e-11!57;UBERON:0005068!1.67e-11!57;UBERON:0006241!1.67e-11!57;UBERON:0007135!1.67e-11!57;UBERON:0000073!1.21e-08!94;UBERON:0001016!1.21e-08!94;UBERON:0005743!1.57e-08!86;UBERON:0003080!2.46e-08!42;UBERON:0001017!5.00e-08!82;UBERON:0002780!7.53e-08!41;UBERON:0001890!7.53e-08!41;UBERON:0006240!7.53e-08!41;UBERON:0000955!1.06e-07!69;UBERON:0006238!1.06e-07!69;UBERON:0002616!1.49e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.98e-11;114!UBERON:0000073;6.86e-07;53!UBERON:0002616;6.86e-07;53!UBERON:0002780;9.39e-07;41!UBERON:0001890;9.39e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-43,114;UBERON:0001049,1.18e-12,56;UBERON:0005068,1.18e-12,56;UBERON:0006241,1.18e-12,56;UBERON:0007135,1.18e-12,56;UBERON:0000073,1.52e-11,53;UBERON:0002616,1.52e-11,53;UBERON:0002780,3.82e-09,41;UBERON:0001890,3.82e-09,41;UBERON:0003080,3.82e-09,41;UBERON:0006240,3.82e-09,41;UBERON:0001017,6.16e-09,81;UBERON:0001016,6.46e-09,89;UBERON:0000955,8.43e-09,68;UBERON:0006238,8.43e-09,68;UBERON:0001893,7.39e-08,34;UBERON:0003528,9.85e-08,34;UBERON:0002020,9.85e-08,34;UBERON:0003075,2.59e-07,82;UBERON:0007284,2.59e-07,82;UBERON:0002791,5.42e-07,32;UBERON:0001869,5.67e-07,32 | |||
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| |||
|short_description=p1@GPR146 | |||
}} |
Revision as of 22:43, 13 September 2013
Short description: | p1@GPR146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GPR146_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000444847, ENST00000481403, uc003sjw.2_5end |
EntrezGene: | GPR146 |
HGNC: | 21718 |
UniProt: | C9JAQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.14e-43 | 114 |
neural tube | 1.18e-12 | 56 |
neural rod | 1.18e-12 | 56 |
future spinal cord | 1.18e-12 | 56 |
neural keel | 1.18e-12 | 56 |
regional part of nervous system | 1.52e-11 | 53 |
regional part of brain | 1.52e-11 | 53 |
regional part of forebrain | 3.82e-09 | 41 |
forebrain | 3.82e-09 | 41 |
anterior neural tube | 3.82e-09 | 41 |
future forebrain | 3.82e-09 | 41 |
central nervous system | 6.16e-09 | 81 |
nervous system | 6.46e-09 | 89 |
brain | 8.43e-09 | 68 |
future brain | 8.43e-09 | 68 |
telencephalon | 7.39e-08 | 34 |
brain grey matter | 9.85e-08 | 34 |
gray matter | 9.85e-08 | 34 |
neural plate | 2.59e-07 | 82 |
presumptive neural plate | 2.59e-07 | 82 |
regional part of telencephalon | 5.42e-07 | 32 |
cerebral hemisphere | 5.67e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.