FFCP PHASE1:Hg19::chr7:73184529..73184547,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1365|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2045|TSSclassifier=S|UniProt=O15551,Q75L79|association_with_transcript=52bp_to_ENST00000395145,NM_001306,uc003tzg.3_5end|coexpression_cluster_id=C4696|description=CAGE_peak_2_at_CLDN3_5end|id=chr7:73184529..73184547,-|ontology_enrichment_celltype=CL:0000066!1.01e-13!254;CL:1000507!1.47e-10!12;CL:1000494!1.47e-10!12;CL:1000497!1.23e-08!18;CL:0002518!1.23e-08!18;CL:1000449!1.24e-08!16;CL:0000039!4.22e-07!7;CL:0000586!4.22e-07!7|ontology_enrichment_celltype_v019=CL:1000507;8.66e-17;10!CL:1000494;8.66e-17;10!CL:1000497;1.02e-12;17!CL:0002518;1.02e-12;17!CL:1000449;1.33e-12;15!CL:0002681;1.94e-08;12!CL:0002584;1.94e-08;12!CL:0002322;6.89e-08;5|ontology_enrichment_celltype_v019_2=CL:1000507,1.00e-16,10;CL:1000494,1.00e-16,10;CL:1000497,9.85e-13,17;CL:0002518,9.85e-13,17;CL:1000449,1.46e-12,15;CL:0002681,2.04e-08,12;CL:0002584,2.04e-08,12;CL:0002322,5.59e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.31e-28!106;DOID:0050687!9.92e-21!143;DOID:299!1.47e-16!25;DOID:162!2.82e-08!235;DOID:3119!8.93e-08!14;DOID:14566!1.04e-07!239;DOID:0050615!3.53e-07!16|ontology_enrichment_disease_v019=DOID:299;6.84e-13;25!DOID:5093;5.18e-09;4!DOID:1612;5.18e-09;4|ontology_enrichment_disease_v019_2=DOID:299,6.96e-13,25;DOID:305,1.11e-10,106;DOID:5093,5.19e-09,4;DOID:1612,5.19e-09,4;DOID:0050687,1.08e-08,143|ontology_enrichment_uberon=UBERON:0000466!9.25e-18!126;UBERON:0004921!1.66e-16!129;UBERON:0004185!1.66e-16!129;UBERON:0001007!2.30e-15!155;UBERON:0001555!2.30e-15!155;UBERON:0007026!2.30e-15!155;UBERON:0000464!6.56e-15!104;UBERON:0005177!1.19e-13!107;UBERON:0004119!1.21e-13!169;UBERON:0000925!1.21e-13!169;UBERON:0006595!1.21e-13!169;UBERON:0009569!1.74e-13!113;UBERON:0000077!5.41e-13!130;UBERON:0000058!2.28e-12!26;UBERON:0005172!2.29e-11!55;UBERON:0005173!2.29e-11!55;UBERON:0002113!3.14e-11!27;UBERON:0003918!3.14e-11!27;UBERON:0005095!3.14e-11!27;UBERON:0007687!3.14e-11!27;UBERON:0007023!6.99e-11!115;UBERON:0009773!1.47e-10!12;UBERON:0001231!1.47e-10!12;UBERON:0004810!1.47e-10!12;UBERON:0000080!1.56e-10!18;UBERON:0002120!1.56e-10!18;UBERON:0004875!1.56e-10!18;UBERON:0005721!1.56e-10!18;UBERON:0005754!1.56e-10!18;UBERON:0007297!1.56e-10!18;UBERON:0004876!2.11e-10!20;UBERON:0005911!2.32e-10!82;UBERON:0001041!2.67e-10!98;UBERON:0002553!2.89e-10!70;UBERON:0000489!1.70e-09!32;UBERON:0006555!1.72e-09!17;UBERON:0005103!1.72e-09!17;UBERON:0000083!1.72e-09!17;UBERON:0009201!1.72e-09!17;UBERON:0004819!1.72e-09!17;UBERON:0006553!1.72e-09!17;UBERON:0003074!1.72e-09!17;UBERON:0003060!1.72e-09!17;UBERON:0002417!2.49e-09!61;UBERON:0000916!2.49e-09!61;UBERON:0001008!3.27e-09!45;UBERON:0003064!3.29e-09!37;UBERON:0006554!1.04e-08!44;UBERON:0004211!1.24e-08!16;UBERON:0001285!1.24e-08!16;UBERON:0007684!1.24e-08!16;UBERON:0003220!1.24e-08!16;UBERON:0004208!1.24e-08!16;UBERON:0003886!1.54e-08!63;UBERON:0003887!2.12e-08!21;UBERON:0003135!4.00e-08!11;UBERON:0000481!7.18e-08!347;UBERON:0005156!8.37e-08!59;UBERON:0000990!8.37e-08!59;UBERON:0003104!8.41e-08!238;UBERON:0009142!8.41e-08!238;UBERON:0000062!1.13e-07!511;UBERON:0003133!1.13e-07!48;UBERON:0002048!2.01e-07!22;UBERON:0000117!2.01e-07!22;UBERON:0000171!2.01e-07!22;UBERON:0000170!2.01e-07!22;UBERON:0005597!2.01e-07!22;UBERON:0000118!2.01e-07!22;UBERON:0005409!4.10e-07!35;UBERON:0001048!6.42e-07!168|ontology_enrichment_uberon_v019=UBERON:0004211;8.66e-17;10!UBERON:0009773;8.66e-17;10!UBERON:0001231;8.66e-17;10!UBERON:0004810;8.66e-17;10!UBERON:0006555;1.33e-12;15!UBERON:0004819;1.33e-12;15!UBERON:0001285;1.33e-12;15!UBERON:0007684;1.33e-12;15!UBERON:0002113;1.77e-11;24!UBERON:0011143;1.77e-11;24!UBERON:0000160;3.60e-09;17!UBERON:0000489;6.98e-09;29!UBERON:0005172;1.49e-08;52!UBERON:0005173;1.49e-08;52!UBERON:0006554;1.80e-08;30!UBERON:0001008;1.80e-08;30!UBERON:0001225;1.94e-08;12!UBERON:0008987;1.94e-08;12!UBERON:0005409;3.14e-08;22!UBERON:0004921;3.15e-08;33!UBERON:0004175;5.71e-07;21!UBERON:0002108;8.53e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.00e-16,10;UBERON:0009569,1.24e-15,112;UBERON:0005177,7.56e-15,101;UBERON:0002113,4.78e-14,26;UBERON:0003918,4.78e-14,26;UBERON:0011143,4.78e-14,26;UBERON:0005095,4.78e-14,26;UBERON:0007687,4.78e-14,26;UBERON:0005172,5.36e-14,54;UBERON:0005173,5.36e-14,54;UBERON:0006555,6.70e-14,16;UBERON:0004819,6.70e-14,16;UBERON:0004211,1.46e-12,15;UBERON:0009773,1.46e-12,15;UBERON:0001231,1.46e-12,15;UBERON:0001285,1.46e-12,15;UBERON:0007684,1.46e-12,15;UBERON:0004208,1.46e-12,15;UBERON:0002417,6.75e-12,60;UBERON:0000916,6.75e-12,60;UBERON:0004921,2.15e-11,118;UBERON:0000489,4.48e-11,31;UBERON:0001007,5.80e-11,145;UBERON:0001555,5.80e-11,145;UBERON:0007026,5.80e-11,145;UBERON:0006554,6.65e-10,47;UBERON:0001008,1.37e-09,48;UBERON:0004119,1.66e-09,160;UBERON:0000925,1.66e-09,160;UBERON:0006595,1.66e-09,160;UBERON:0000160,3.52e-09,17;UBERON:0001225,2.04e-08,12;UBERON:0008987,2.04e-08,12;UBERON:0002100,9.23e-0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,1.62758471326295,0.665756774185513,0,0|short_description=p2@CLDN3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1365 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2045 | |||
|TSSclassifier=S | |||
|UniProt=O15551,Q75L79 | |||
|association_with_transcript=52bp_to_ENST00000395145,NM_001306,uc003tzg.3_5end | |||
|coexpression_cluster_id=C4696 | |||
|description=CAGE_peak_2_at_CLDN3_5end | |||
|id=chr7:73184529..73184547,- | |||
|ontology_enrichment_celltype=CL:0000066!1.01e-13!254;CL:1000507!1.47e-10!12;CL:1000494!1.47e-10!12;CL:1000497!1.23e-08!18;CL:0002518!1.23e-08!18;CL:1000449!1.24e-08!16;CL:0000039!4.22e-07!7;CL:0000586!4.22e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.66e-17;10!CL:1000494;8.66e-17;10!CL:1000497;1.02e-12;17!CL:0002518;1.02e-12;17!CL:1000449;1.33e-12;15!CL:0002681;1.94e-08;12!CL:0002584;1.94e-08;12!CL:0002322;6.89e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.00e-16,10;CL:1000494,1.00e-16,10;CL:1000497,9.85e-13,17;CL:0002518,9.85e-13,17;CL:1000449,1.46e-12,15;CL:0002681,2.04e-08,12;CL:0002584,2.04e-08,12;CL:0002322,5.59e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.31e-28!106;DOID:0050687!9.92e-21!143;DOID:299!1.47e-16!25;DOID:162!2.82e-08!235;DOID:3119!8.93e-08!14;DOID:14566!1.04e-07!239;DOID:0050615!3.53e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:299;6.84e-13;25!DOID:5093;5.18e-09;4!DOID:1612;5.18e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.96e-13,25;DOID:305,1.11e-10,106;DOID:5093,5.19e-09,4;DOID:1612,5.19e-09,4;DOID:0050687,1.08e-08,143 | |||
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|short_description=p2@CLDN3 | |||
}} |
Revision as of 01:54, 14 September 2013
Short description: | p2@CLDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CLDN3_5end |
Coexpression cluster: | C4696_serous_colon_small_MCF7_thyroid_endometrial_choriocarcinoma |
Association with transcript: | 52bp_to_ENST00000395145, NM_001306, uc003tzg.3_5end |
EntrezGene: | CLDN3 |
HGNC: | 2045 |
UniProt: | O15551Q75L79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.00e-16 | 10 |
nephron tubule epithelial cell | 1.00e-16 | 10 |
kidney cell | 9.85e-13 | 17 |
kidney epithelial cell | 9.85e-13 | 17 |
epithelial cell of nephron | 1.46e-12 | 15 |
kidney cortical cell | 2.04e-08 | 12 |
renal cortical epithelial cell | 2.04e-08 | 12 |
embryonic stem cell | 5.59e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.96e-13 | 25 |
carcinoma | 1.11e-10 | 106 |
thoracic cancer | 5.19e-09 | 4 |
breast cancer | 5.19e-09 | 4 |
cell type cancer | 1.08e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.