FFCP PHASE1:Hg19::chr10:28822025..28822036,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17327 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTA9 | |||
|association_with_transcript=-205bp_to_ENST00000347934_5end | |||
|description=CAGE_peak_6_at_WAC_5end | |||
|id=chr10:28822025..28822036,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-29!115;UBERON:0001049!8.93e-15!57;UBERON:0005068!8.93e-15!57;UBERON:0006241!8.93e-15!57;UBERON:0007135!8.93e-15!57;UBERON:0002780!9.11e-14!41;UBERON:0001890!9.11e-14!41;UBERON:0006240!9.11e-14!41;UBERON:0003080!2.01e-13!42;UBERON:0002020!2.12e-11!34;UBERON:0003528!2.12e-11!34;UBERON:0001893!3.87e-11!34;UBERON:0002791!1.01e-10!33;UBERON:0001017!1.38e-10!82;UBERON:0002616!2.15e-10!59;UBERON:0005743!2.52e-10!86;UBERON:0001869!3.02e-10!32;UBERON:0002619!4.95e-10!22;UBERON:0000955!7.36e-10!69;UBERON:0006238!7.36e-10!69;UBERON:0000073!2.47e-09!94;UBERON:0001016!2.47e-09!94;UBERON:0001950!4.89e-09!20;UBERON:0003075!5.49e-09!86;UBERON:0007284!5.49e-09!86;UBERON:0002346!5.81e-08!90;UBERON:0000956!6.89e-08!25;UBERON:0000203!6.89e-08!25;UBERON:0003056!9.92e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.02e-10;34!UBERON:0002020;1.02e-10;34!UBERON:0002780;1.26e-10;41!UBERON:0001890;1.26e-10;41!UBERON:0002619;1.78e-10;22!UBERON:0001893;3.86e-10;34!UBERON:0002791;6.45e-10;32!UBERON:0001869;1.03e-09;32!UBERON:0001950;3.49e-09;20!UBERON:0000073;3.88e-09;53!UBERON:0002616;3.88e-09;53!UBERON:0007023;2.16e-08;114!UBERON:0000956;2.73e-08;25!UBERON:0000203;2.73e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.96e-33,114;UBERON:0001049,5.81e-19,56;UBERON:0005068,5.81e-19,56;UBERON:0006241,5.81e-19,56;UBERON:0007135,5.81e-19,56;UBERON:0000073,1.03e-17,53;UBERON:0002616,1.03e-17,53;UBERON:0002780,4.14e-16,41;UBERON:0001890,4.14e-16,41;UBERON:0003080,4.14e-16,41;UBERON:0006240,4.14e-16,41;UBERON:0001017,7.91e-14,81;UBERON:0003528,1.04e-13,34;UBERON:0002020,1.04e-13,34;UBERON:0001893,2.21e-13,34;UBERON:0000955,8.41e-13,68;UBERON:0006238,8.41e-13,68;UBERON:0002791,2.18e-12,32;UBERON:0001869,2.94e-12,32;UBERON:0001016,1.12e-11,89;UBERON:0002619,1.18e-11,22;UBERON:0003075,5.41e-11,82;UBERON:0007284,5.41e-11,82;UBERON:0001950,2.08e-10,20;UBERON:0002346,1.20e-09,86;UBERON:0000956,2.76e-09,25;UBERON:0000203,2.76e-09,25;UBERON:0003056,3.35e-08,61;UBERON:0010371,3.42e-07,104 | |||
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| |||
|short_description=p6@WAC | |||
}} |
Revision as of 02:20, 11 January 2014
Short description: | p6@WAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WAC_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000347934_5end |
EntrezGene: | WAC |
HGNC: | 17327 |
UniProt: | Q9BTA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.96e-33 | 114 |
neural tube | 5.81e-19 | 56 |
neural rod | 5.81e-19 | 56 |
future spinal cord | 5.81e-19 | 56 |
neural keel | 5.81e-19 | 56 |
regional part of nervous system | 1.03e-17 | 53 |
regional part of brain | 1.03e-17 | 53 |
regional part of forebrain | 4.14e-16 | 41 |
forebrain | 4.14e-16 | 41 |
anterior neural tube | 4.14e-16 | 41 |
future forebrain | 4.14e-16 | 41 |
central nervous system | 7.91e-14 | 81 |
brain grey matter | 1.04e-13 | 34 |
gray matter | 1.04e-13 | 34 |
telencephalon | 2.21e-13 | 34 |
brain | 8.41e-13 | 68 |
future brain | 8.41e-13 | 68 |
regional part of telencephalon | 2.18e-12 | 32 |
cerebral hemisphere | 2.94e-12 | 32 |
nervous system | 1.12e-11 | 89 |
regional part of cerebral cortex | 1.18e-11 | 22 |
neural plate | 5.41e-11 | 82 |
presumptive neural plate | 5.41e-11 | 82 |
neocortex | 2.08e-10 | 20 |
neurectoderm | 1.20e-09 | 86 |
cerebral cortex | 2.76e-09 | 25 |
pallium | 2.76e-09 | 25 |
pre-chordal neural plate | 3.35e-08 | 61 |
ecto-epithelium | 3.42e-07 | 104 |