FFCP PHASE1:Hg19::chr10:64973705..64973769,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=221037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12313 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-438bp_to_AK095584_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_JMJD1C_5end | |||
|id=chr10:64973705..64973769,- | |||
|ontology_enrichment_celltype=CL:0000766!9.68e-15!76;CL:0002057!3.23e-14!42;CL:0002009!9.46e-14!65;CL:0000860!1.65e-13!45;CL:0000738!3.01e-13!140;CL:0002194!3.43e-13!63;CL:0000576!3.43e-13!63;CL:0000040!3.43e-13!63;CL:0000559!3.43e-13!63;CL:0000557!2.54e-12!71;CL:0002087!2.63e-12!119;CL:0000839!3.40e-11!70;CL:0002031!2.40e-10!124;CL:0002032!3.71e-09!165;CL:0000837!3.71e-09!165;CL:0000037!4.70e-09!172;CL:0000566!4.70e-09!172;CL:0000763!6.17e-09!112;CL:0000049!6.17e-09!112;CL:0000988!1.46e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.74e-19;33!CL:0002057;3.74e-19;33!CL:0000473;6.56e-15;39!CL:0000234;6.56e-15;39!CL:0000576;1.07e-12;48!CL:0000766;1.13e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.01e-20,42;CL:0002057,6.01e-20,42;CL:0000473,6.36e-19,48;CL:0000234,6.36e-19,48;CL:0000766,5.79e-16,72;CL:0002009,3.13e-15,61;CL:0000738,3.98e-15,136;CL:0002194,6.41e-15,59;CL:0000576,6.41e-15,59;CL:0000040,6.41e-15,59;CL:0000559,6.41e-15,59;CL:0002087,7.56e-15,115;CL:0000557,6.74e-13,67;CL:0000839,3.14e-12,66;CL:0002031,4.65e-12,120;CL:0000037,5.14e-10,168;CL:0002032,2.34e-09,161;CL:0000837,2.34e-09,161;CL:0000988,2.64e-09,177;CL:0000763,1.76e-08,108;CL:0000049,1.76e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.48e-09!80;UBERON:0002390!6.12e-09!102;UBERON:0003061!6.12e-09!102;UBERON:0001474!7.72e-09!86;UBERON:0004765!1.88e-07!101;UBERON:0001434!1.88e-07!101;UBERON:0002193!2.37e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.66e-11,98;UBERON:0003061,6.66e-11,98;UBERON:0002371,3.78e-10,76;UBERON:0002193,2.05e-09,108;UBERON:0001474,2.27e-09,82;UBERON:0001017,1.81e-08,81;UBERON:0001049,5.88e-08,56;UBERON:0005068,5.88e-08,56;UBERON:0006241,5.88e-08,56;UBERON:0007135,5.88e-08,56;UBERON:0001016,7.21e-08,89;UBERON:0004765,1.12e-07,90;UBERON:0001434,1.40e-07,100;UBERON:0002405,3.87e-07,93 | |||
|phase1_expression=0,0.856402095563933,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,1.23186982565596,0.251085279189606,0.61130724598361,0.164201178899891,0.236132343941038,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.46480320348181,0.284338464974843,0,1.10799081706375,3.60980005446255,3.47217393145363,0.671746422719773,0.647787332037959,0.257575567634187,2.61716829803216,0.755751887377619,2.42584061187816,2.55671940596253,4.93401465626191,3.09706370895104,5.17846306179871,3.07392847834921,1.6553756092201,6.55016793399575,5.16387746867061,0,6.40023954444856,3.547779950752,0.449446968890169,5.50951006267625,1.28371610830437,3.83602275479425,2.63881040149373,4.3882004676759,3.83602275479425,6.96502172708602,1.13477044938228,1.86846674698672,8.79370328398601,7.82224377630302,1.08594422352558,3.02699751316684,0.736555271975129,1.89877432464531,0.633765858935825,1.06302149982522,0,0.786300418025466,0.750884464207532,0.32145117339416,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0.426730222566507,1.20118796110804,0,0.661044872784862,0,7.39976859842283,2.93618594685469,2.6759125968766,2.64342657158052,1.12101712596307,0.263384084775077,1.57367816091066,7.46720449223413,3.28962398399215,0.167186495390678,0.977766799900771,0.473447805734733,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.640456598628376,0.520237390239513,1.15106533222573,0.552700035571697,0.579606171470105,0.889719378972363,0.802622484269139,1.04535523804977,0.113309342697566,0,0.68725489096526,0.759059076058509,0,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,1.41124720257313,5.08136371988664,3.47578569318718,9.75227465255847,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,1.33037638477538,0.614843499851882,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0,3.9534125230819,11.6334079244498,0,0.496971951695318,0.506522046658319,0.132409180813219,0.286836620748814,0,1.12135520028461,0,0,0.622422070799533,0.404132016209064,0,0,1.72852777344,0,0,0,0.747243402759005,0.469737994575059,0.647491777472526,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,0.717558542755448,0.213557388818567,0,0.900273288253207,0.103052529238439,1.28820270022815,0.18611685633159,0,0.389748020644795,1.26216887122057,0.736399189138395,0.323292113637624,0.710019185033229,0.10075209822764,0.169560592310488,0.193260853163297,1.09098448236334,0,2.19552671033272,0.530119073285941,0.813357600086629,1.34759371519982,1.7662459561294,4.01475094983413,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0.505754070234305,0,0.441175890929576,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0.179117045405697,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0.308482478109971,1.50171528921959,0.285826432630578,0.112131084345361,0.43596006883328,0.22001485746285,0.775630294546667,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.399891964728228,1.2162378064119,0.502257091432126,6.32501818449095,0.239624855491583,4.59447743336456,0,0.579125226670317,0.410952645100767,0.358121926479791,0,1.18218456121156,5.39068937148793,2.95188983443421,1.01637849688985,0,2.31986643833309,0,5.74144876487847,21.7212036944683,50.8574480646842,10.3603878359009,0.613457458595699,0.500170521059677,0.542530047399471,2.07970861530807,1.42743191037729,0.473107245101804,0.702848489956279,0,0,0,1.32845119707087,0,0.260650843404249,0,0,1.24060815673732,4.52999821719095,2.24127871387233,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.771048469013278,0.177561725313127,0,0,0.697262270759755,0.483437798366489,0.40101294060657,1.28913384510255,0.114814448164607,1.45672934405374,0.262248829918848,0,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.732555718546747,0.247528499761764,0,0,0,0.193341436584244,0.462145851343933,0.614014698904518,0.137836572484531,0.537101224341368,0.580066775656914,0.170453254832202,0.0890320356467374,0.330569830721956,0.576570202095319,0.765676274967505,1.3150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| |||
|short_description=p8@JMJD1C | |||
}} |
Revision as of 03:06, 11 January 2014
Short description: | p8@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_8_at_JMJD1C_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -438bp_to_AK095584_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.01e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.01e-20 | 42 |
defensive cell | 6.36e-19 | 48 |
phagocyte | 6.36e-19 | 48 |
myeloid leukocyte | 5.79e-16 | 72 |
macrophage dendritic cell progenitor | 3.13e-15 | 61 |
leukocyte | 3.98e-15 | 136 |
monopoietic cell | 6.41e-15 | 59 |
monocyte | 6.41e-15 | 59 |
monoblast | 6.41e-15 | 59 |
promonocyte | 6.41e-15 | 59 |
nongranular leukocyte | 7.56e-15 | 115 |
granulocyte monocyte progenitor cell | 6.74e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.14e-12 | 66 |
hematopoietic lineage restricted progenitor cell | 4.65e-12 | 120 |
hematopoietic stem cell | 5.14e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.34e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-09 | 161 |
hematopoietic cell | 2.64e-09 | 177 |
myeloid cell | 1.76e-08 | 108 |
common myeloid progenitor | 1.76e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.66e-11 | 98 |
blood island | 6.66e-11 | 98 |
bone marrow | 3.78e-10 | 76 |
hemolymphoid system | 2.05e-09 | 108 |
bone element | 2.27e-09 | 82 |
central nervous system | 1.81e-08 | 81 |
neural tube | 5.88e-08 | 56 |
neural rod | 5.88e-08 | 56 |
future spinal cord | 5.88e-08 | 56 |
neural keel | 5.88e-08 | 56 |
nervous system | 7.21e-08 | 89 |
skeletal element | 1.12e-07 | 90 |
skeletal system | 1.40e-07 | 100 |
immune system | 3.87e-07 | 93 |