FFCP PHASE1:Hg19::chr11:94528140..94528188,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:94528140..94528188,+ | |||
|id=chr11:94528140..94528188,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.08e-33!180;CL:0000192!4.56e-19!42;CL:0000514!4.56e-19!42;CL:0000680!1.66e-18!57;CL:0000056!1.66e-18!57;CL:0000355!1.66e-18!57;CL:0000359!8.24e-18!32;CL:0000183!5.07e-17!59;CL:0000187!5.59e-17!54;CL:0000057!4.64e-16!75;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0000222!3.68e-13!119;CL:0000220!3.59e-10!246;CL:0002620!5.65e-10!23;CL:0002321!6.38e-10!248;CL:0002371!1.01e-07!591;CL:0002539!7.59e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.32e-24;32!CL:0000192;1.88e-18;43!CL:0002620;9.30e-13;23!CL:0002539;2.78e-09;10!CL:0000187;5.99e-09;55!CL:0000048;3.57e-08;58!CL:0000134;5.58e-08;55!CL:0000057;1.64e-07;73!CL:0000723;4.39e-07;61!CL:0002320;5.11e-07;188!CL:0000393;7.14e-07;61!CL:0000211;7.14e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.13e-26,43;CL:0000514,3.13e-26,43;CL:0000359,8.06e-26,32;CL:0000680,1.23e-20,58;CL:0000056,1.23e-20,58;CL:0000355,1.23e-20,58;CL:0000187,1.59e-18,55;CL:0000057,2.32e-16,76;CL:0000393,2.49e-15,61;CL:0000211,2.49e-15,61;CL:0000048,1.14e-14,427;CL:0000723,2.76e-14,433;CL:0000222,6.76e-14,121;CL:0000034,2.98e-13,441;CL:0002620,1.41e-12,23;CL:0002539,1.86e-09,10;CL:0002321,1.16e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-18;43!CL:0000355;1.66e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!4.99e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.31e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.18e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.21e-22!79;UBERON:0007798!1.21e-22!79;UBERON:0000914!9.36e-22!83;UBERON:0002329!9.36e-22!83;UBERON:0003077!9.36e-22!83;UBERON:0003059!9.36e-22!83;UBERON:0007282!9.36e-22!83;UBERON:0009618!9.36e-22!83;UBERON:0007285!9.36e-22!83;UBERON:0001981!7.98e-21!60;UBERON:0007500!7.98e-21!60;UBERON:0004537!7.98e-21!60;UBERON:0006965!7.98e-21!60;UBERON:0004290!1.66e-20!70;UBERON:0001637!1.98e-20!42;UBERON:0003509!1.98e-20!42;UBERON:0004572!1.98e-20!42;UBERON:0001134!3.80e-18!61;UBERON:0002036!3.80e-18!61;UBERON:0003082!3.80e-18!61;UBERON:0002385!6.00e-18!63;UBERON:0001015!6.00e-18!63;UBERON:0000383!6.00e-18!63;UBERON:0004872!1.57e-17!84;UBERON:0004535!2.17e-17!110;UBERON:0000055!2.90e-17!69;UBERON:0001009!3.67e-17!113;UBERON:0004573!1.76e-16!33;UBERON:0004571!1.76e-16!33;UBERON:0000486!3.22e-16!82;UBERON:0003914!4.70e-13!118;UBERON:0000490!8.87e-13!138;UBERON:0005256!1.36e-12!143;UBERON:0000475!1.99e-12!365;UBERON:0000119!4.73e-10!312;UBERON:0000947!4.78e-10!21;UBERON:0010191!4.78e-10!21;UBERON:0003102!1.60e-09!95;UBERON:0000483!4.31e-09!309;UBERON:0002199!6.16e-09!45;UBERON:0002416!6.16e-09!45;UBERON:0002100!1.19e-08!216;UBERON:0002097!7.83e-08!40;UBERON:0004237!7.59e-07!10;UBERON:0004695!7.59e-07!10;UBERON:0002111!7.59e-07!10;UBERON:0004178!7.59e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.16e-22;33!UBERON:0004571;3.16e-22;33!UBERON:0001637;4.40e-21;42!UBERON:0003509;4.40e-21;42!UBERON:0004572;4.40e-21;42!UBERON:0000947;1.19e-14;21!UBERON:0010191;1.19e-14;21!UBERON:0007500;4.44e-14;56!UBERON:0001981;4.44e-14;56!UBERON:0004537;4.44e-14;56!UBERON:0002049;5.22e-12;75!UBERON:0007798;5.22e-12;75!UBERON:0000055;8.64e-10;65!UBERON:0004237;2.78e-09;10!UBERON:0004695;2.78e-09;10!UBERON:0002111;2.78e-09;10!UBERON:0004178;2.78e-09;10!UBERON:0006876;3.22e-08;11!UBERON:0003914;1.78e-07;74!UBERON:0001009;4.18e-07;112!UBERON:0004535;4.42e-07;109!UBERON:0002199;4.65e-07;46!UBERON:0002416;4.65e-07;46!UBERON:0002097;6.06e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.21e-30,78;UBERON:0007798,2.21e-30,78;UBERON:0001637,3.10e-29,42;UBERON:0003509,3.10e-29,42;UBERON:0004572,3.10e-29,42;UBERON:0007500,3.88e-26,59;UBERON:0001981,3.88e-26,59;UBERON:0004537,3.88e-26,59;UBERON:0006965,3.88e-26,59;UBERON:0004573,2.59e-24,33;UBERON:0004571,2.59e-24,33;UBERON:0002329,6.13e-23,71;UBERON:0003059,6.13e-23,71;UBERON:0007282,6.13e-23,71;UBERON:0004290,6.13e-23,71;UBERON:0009618,6.13e-23,71;UBERON:0000055,7.17e-23,68;UBERON:0007524,1.14e-22,73;UBERON:0004535,2.16e-22,109;UBERON:0003077,2.30e-22,72;UBERON:0007285,2.30e-22,72;UBERON:0004872,1.34e-21,83;UBERON:0001009,3.53e-21,112;UBERON:0007503,7.20e-21,78;UBERON:0001134,3.54e-19,62;UBERON:0002036,3.54e-19,62;UBERON:0003082,3.54e-19,62;UBERON:0002385,4.28e-18,64;UBERON:0001015,4.28e-18,64;UBERON:0000383,4.28e-18,64;UBERON:0000486,4.81e-17,83;UBERON:0000490,3.81e-16,148;UBERON:0003914,2.10e-15,117;UBERON:0000947,1.13e-14,21;UBERON:0010191,1.13e-14,21;UBERON:0005256,5.90e-14,122;UBERON:0002199,3.94e-10,46;UBERON:0002416,3.94e-10,46;UBERON:0000926,9.17e-10,315;UBERON:0004120,9.17e-10,315;UBERON:0006603,9.17e-10,315;UBERON:0004237,1.86e-09,10;UBERON:0004695,1.86e-09,10;UBERON:0002111,1.86e-09,10;UBERON:0004178,1.86e-09,10;UBERON:0003104,2.58e-09,160;UBERON:0009142,2.58e-09,160;UBERON:0002097,6.42e-09,41;UBERON:0006876,2.11e-08,11;UBERON:0000119,9.78e-08,309 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,1.89515962028049,0.261185628199839,0.982935746006035,0,0,0.791300934685361,0.247532705920093,1.98838425436749,8.74022690387308,10.2458069764076,6.57279081348636,3.90346239032406,1.35433163884467,3.87601313364081,0.313454721478088,0,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,1.80719576192283,0.50133791063589,1.59331170856906,4.7717156823066,5.83961844363163,2.07976597760949,3.76939975686359,2.89854792787316,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,2.18638648103376,3.4409383804245,2.77712401286075,3.95715559346807,3.77549492588915,0.550236083880135,2.08994966536811,0,0,0,0,0,0,2.57364156242108,0,0.892997282840798,0.673588117878509,0.675668882899933,6.13266549863533,3.79706263827252,1.83201743930407,0,0,0,0.993943903390637,3.16576279161449,25.2901535353248,3.15520282823695,3.19201543978521,0.560677600142307,0,0.74000264525148,2.48968828319813,1.75123873690594,1.9615428373615,6.35701196108712,6.91411109375999,0.70296429550139,7.49184184392769,5.70471821544449,6.57574194427925,1.52664848236894,1.29498355494505,1.26405726032024,2.24569588380383,0.122834317311768,0.619954687054593,1.18800285728205,2.47266929278557,3.64064544775211,4.31170885089743,0.336672227908132,0.750711119231785,4.15596173226274,1.31693286264251,3.37136575378922,3.30523729594513,2.60894021268048,4.84352016359927,1.06778694409284,5.08636562782948,6.30191301777245,3.50378599410692,2.57640540045629,2.23340227597908,4.05063197379039,0.876933046450788,3.78650661366172,1.65689817556139,2.10139873864455,4.26011511019937,1.5112814734146,2.03472710772585,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0.756962552626885,0,1.56449532329816,0,1.38134921352481,0.928735856063958,3.60939740834793,0,0,0,0,0,0,0,0,0,0,7.01208869017229,0.8231480226628,0,0,0,0.590789906681404,0,0,3.94605963686609,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.977424915930974,2.07986957055916,1.44331342025273,0.463721619900307,4.69634776943287,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.761974731506028,3.81988425558278,0,6.84289784090821,0.822619941626588,1.8020583470635,0,16.5954004831134,10.899001720832,13.4942445910548,19.3907573636667,0,0.845302752556,1.32969058292435,2.08014873822732,0.771622122786426,2.83698264046557,2.39779961114489,0.428933980974443,0,0.823240336780769,3.90883421152482,0.355391948742546,0.791951872933429,8.44030255766841,2.61460037580088,5.19859554146697,0,0,0,6.9491208092559,0,2.85273810081437,4.1986578933598,6.78071864416265,3.04403637507822,0,0,0,0,1.77866236955724,2.60279707715243,0,0,0.637938751653163,0,0,0,0.736148950314839,0,0.813795071099207,1.45579603071565,4.81758269752337,1.10391690523754,4.09994952474496,3.31040709700491,0,0,2.65690239414175,1.29058417979192,1.73767228936166,1.17480694477644,3.43143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,1.68808170616869,0.561320188866147,1.92208723883551,1.02341449813341,3.37793234401576,0,1.07946785661859,2.48586415438378,0.657017248110473,5.71179872101983,1.16210378459959,0,0.601519410909855,0.276242966807689,2.87036120411517,4.37018803216121,1.04899531967539,0,0,0,0,0,1.13733384070897,0.680374821106063,1.0795795805107,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.551346289938122,0.107420244868274,0,0.426133137080504,0.801288320820636,0.330569830721956,0.576570202095319,0.382838137483752,0.30347334256665,1.39453664789186,9.75918275174984,2.7881490806424,7.08477234405004,7.45228442443831,1.73986598415015,7.96894142146856,12.4518651465532,2.97726695487734,5.06207079549961,1.90630193923825,2.81487570442467,1.28381696410176,4.13664222303718,1.56989728039846,1.2591072030832,0.823611089208164,0.824686816419805,12.7374963391189,4.75530963519025,4.21258456238981,0,6.58026422004468,6.33900880540533,1.77449884830381,1.1312434556297,7.910568163417,1.10273068709225,5.30751180192976,7.89211593456773,1.73632660280006,2.62357900818653,8.52223583243357,2.16876448669825,2.53526042279017,2.15117028306077,1.17898849215745,11.0568025959188,2.83808851256478,0.211107635297664,0,1.13841952129715,1.39973888097993,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0.879049075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| |||
|short_description=p@chr11:94528140..94528188,+ | |||
}} |
Revision as of 09:54, 11 January 2014
Short description: | p@chr11:94528140..94528188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94528140..94528188, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.13e-26 | 43 |
smooth muscle myoblast | 3.13e-26 | 43 |
vascular associated smooth muscle cell | 8.06e-26 | 32 |
muscle precursor cell | 1.23e-20 | 58 |
myoblast | 1.23e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-20 | 58 |
muscle cell | 1.59e-18 | 55 |
fibroblast | 2.32e-16 | 76 |
electrically responsive cell | 2.49e-15 | 61 |
electrically active cell | 2.49e-15 | 61 |
multi fate stem cell | 1.14e-14 | 427 |
somatic stem cell | 2.76e-14 | 433 |
mesodermal cell | 6.76e-14 | 121 |
stem cell | 2.98e-13 | 441 |
skin fibroblast | 1.41e-12 | 23 |
aortic smooth muscle cell | 1.86e-09 | 10 |
embryonic cell | 1.16e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.18e-13 | 14 |