FFCP PHASE1:Hg19::chr12:10871049..10871064,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000539204_5end | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_19_at_CSDA_5end | |||
|id=chr12:10871049..10871064,- | |||
|ontology_enrichment_celltype=CL:0002334!5.29e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.32e-12;1!CL:0002581;2.32e-12;1!CL:0002616;2.32e-12;1!CL:0002561;8.28e-07;2!CL:0002600;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.40e-12,1;CL:0002581,1.57e-12,1;CL:0002600,5.73e-07,2;CL:0002561,7.20e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.90e-13;1!DOID:4549;9.90e-13;1!DOID:5861;9.90e-13;1!DOID:6496;9.90e-13;1!DOID:3307;8.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.92e-13,1;DOID:4549,9.92e-13,1;DOID:5861,9.92e-13,1;DOID:6496,9.92e-13,1;DOID:3307,6.07e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;7.99e-24;2!UBERON:0001630;7.99e-24;2!UBERON:0005406;6.10e-23;2!UBERON:0001389;7.87e-13;1!UBERON:0000026;7.87e-13;1!UBERON:0008784;7.87e-13;1!UBERON:0006058;7.87e-13;1!UBERON:0003663;7.87e-13;1!UBERON:0004256;7.87e-13;1!UBERON:0004708;7.87e-13;1!UBERON:0002101;7.87e-13;1!UBERON:0004709;7.87e-13;1!UBERON:0002529;7.87e-13;1!UBERON:0010538;7.87e-13;1!UBERON:0003661;7.87e-13;1!UBERON:0010890;7.87e-13;1!UBERON:0002471;7.87e-13;1!UBERON:0001383;7.87e-13;1!UBERON:0010758;7.87e-13;1!UBERON:0010707;7.87e-13;1!UBERON:0000978;7.87e-13;1!UBERON:0002103;7.87e-13;1!UBERON:0001665;7.87e-13;1!UBERON:0003823;7.87e-13;1!UBERON:0000154;7.87e-13;1!UBERON:0010709;7.87e-13;1!UBERON:0001013;7.88e-13;14!UBERON:0002426;8.83e-13;1!UBERON:0003831;8.83e-13;1!UBERON:0003898;8.83e-13;1!UBERON:0004830;8.83e-13;1!UBERON:0003830;8.83e-13;1!UBERON:0005175;8.83e-13;1!UBERON:0001774;8.83e-13;1!UBERON:0001103;8.83e-13;1!UBERON:0001134;1.36e-11;16!UBERON:0002036;1.36e-11;16!UBERON:0005933;8.28e-07;2!UBERON:0005942;8.28e-07;2!UBERON:0005932;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,8.02e-24,2;UBERON:0001630,8.02e-24,2;UBERON:0005406,2.49e-23,2;UBERON:0001013,6.35e-13,14;UBERON:0005418,7.89e-13,1;UBERON:0001389,7.89e-13,1;UBERON:0000026,7.89e-13,1;UBERON:0008784,7.89e-13,1;UBERON:0006058,7.89e-13,1;UBERON:0003663,7.89e-13,1;UBERON:0004256,7.89e-13,1;UBERON:0004708,7.89e-13,1;UBERON:0002101,7.89e-13,1;UBERON:0004709,7.89e-13,1;UBERON:0002529,7.89e-13,1;UBERON:0010538,7.89e-13,1;UBERON:0003661,7.89e-13,1;UBERON:0010890,7.89e-13,1;UBERON:0002471,7.89e-13,1;UBERON:0001383,7.89e-13,1;UBERON:0004357,7.89e-13,1;UBERON:0004347,7.89e-13,1;UBERON:0005420,7.89e-13,1;UBERON:0005732,7.89e-13,1;UBERON:0010758,7.89e-13,1;UBERON:0010707,7.89e-13,1;UBERON:0000978,7.89e-13,1;UBERON:0002103,7.89e-13,1;UBERON:0001665,7.89e-13,1;UBERON:0003823,7.89e-13,1;UBERON:0000154,7.89e-13,1;UBERON:0010709,7.89e-13,1;UBERON:0005733,7.89e-13,1;UBERON:0005730,7.89e-13,1;UBERON:0002426,8.85e-13,1;UBERON:0003831,8.85e-13,1;UBERON:0003898,8.85e-13,1;UBERON:0004830,8.85e-13,1;UBERON:0003830,8.85e-13,1;UBERON:0005175,8.85e-13,1;UBERON:0001774,8.85e-13,1;UBERON:0001103,8.85e-13,1;UBERON:0010084,8.85e-13,1;UBERON:0005933,7.20e-07,2;UBERON:0005942,7.20e-07,2;UBERON:0005932,7.20e-07,2 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.908144565869588,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0,0,1.31693286264251,0,0.751190294532984,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0,0,0,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0.447792613514241,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.434418072340414,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.246381468041427,0.519254429183621,0.464841513839837,0,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.917870904715969,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.290012154876366,0,0,0,0.107420244868274,0.145016693914229,0,1.06838442776085,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.855877976067841,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,4.01288823649394,0,0,0.391329237864179,0.485560759068186,0,0,0,0.126373159256976,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,3.17722056089401,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687697182986169,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0.378806010550178,0.251567901752575,0,0.915360273587694,0.302461847526478,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,1.34699795506368,1.26184898228651,0,0,0,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0,0,0.801711364730253,0.828864656652147,0.51215543128185,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,6.47428837187895,10.9849203336184,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.61193297845189,0.26721740526556,1.01084389488329,0.250707539292375,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0.665320713092027,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p19@CSDA | |||
}} |
Revision as of 12:08, 11 January 2014
Short description: | p19@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CSDA_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -20bp_to_ENST00000539204_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.40e-12 | 1 |
perirenal preadipocyte | 1.57e-12 | 1 |
smooth muscle cell of trachea | 5.73e-07 | 2 |
outer root sheath cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.92e-13 | 1 |
extraosseous chondrosarcoma | 9.92e-13 | 1 |
myxoid chondrosarcoma | 9.92e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 9.92e-13 | 1 |
teratoma | 6.07e-07 | 2 |