FFCP PHASE1:Hg19::chr12:51986236..51986261,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:51986236..51986261,- | |||
|id=chr12:51986236..51986261,- | |||
|ontology_enrichment_celltype=CL:0000055!7.42e-32!180;CL:0002620!1.99e-22!23;CL:0000057!1.21e-21!75;CL:0000680!1.12e-14!57;CL:0000056!1.12e-14!57;CL:0000355!1.12e-14!57;CL:0000359!2.40e-14!32;CL:0000192!1.27e-13!42;CL:0000514!1.27e-13!42;CL:0000187!1.19e-12!54;CL:0000183!1.26e-10!59;CL:0000222!1.27e-10!119;CL:0000393!2.89e-10!60;CL:0000211!2.89e-10!60;CL:0000077!1.24e-09!19;CL:0000048!1.32e-08!430;CL:0000723!1.43e-08!436;CL:0002539!3.67e-08!10;CL:0000034!8.53e-08!444;CL:0002334!1.21e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.78e-38;23!CL:0002539;1.47e-12;10!CL:0002551;1.03e-11;6!CL:0000359;1.97e-09;32!CL:0000056;7.82e-09;4!CL:0002594;3.92e-08;4!CL:0000057;1.42e-07;73!CL:0000515;7.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.79e-38,23;CL:0000057,6.61e-19,76;CL:0002539,1.37e-12,10;CL:0002551,4.53e-12,6;CL:0000048,8.79e-12,427;CL:0000723,2.34e-11,433;CL:0000034,8.25e-11,441;CL:0000359,1.79e-09,32;CL:0000515,5.10e-09,4;CL:0000680,3.34e-08,58;CL:0000056,3.34e-08,58;CL:0000355,3.34e-08,58;CL:0002594,3.60e-08,4;CL:0000192,2.43e-07,43;CL:0000514,2.43e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000515;7.82e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!6.95e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.34e-12;14!DOID:17;5.96e-12;5!DOID:450;5.96e-12;5!DOID:66;5.96e-12;5!DOID:423;5.96e-12;5!DOID:0080000;5.96e-12;5!DOID:11722;5.96e-12;5!DOID:0060084;7.23e-08;3!DOID:127;7.23e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.34e-12,14;DOID:17,5.26e-12,5;DOID:450,5.26e-12,5;DOID:66,5.26e-12,5;DOID:423,5.26e-12,5;DOID:0080000,5.26e-12,5;DOID:11722,5.26e-12,5;DOID:0060084,4.71e-08,3;DOID:127,4.71e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.77e-15!70;UBERON:0000914!3.09e-15!83;UBERON:0002329!3.09e-15!83;UBERON:0003077!3.09e-15!83;UBERON:0003059!3.09e-15!83;UBERON:0007282!3.09e-15!83;UBERON:0009618!3.09e-15!83;UBERON:0007285!3.09e-15!83;UBERON:0000486!7.76e-15!82;UBERON:0001134!7.05e-13!61;UBERON:0002036!7.05e-13!61;UBERON:0003082!7.05e-13!61;UBERON:0002199!9.41e-13!45;UBERON:0002416!9.41e-13!45;UBERON:0002385!4.48e-12!63;UBERON:0001015!4.48e-12!63;UBERON:0000383!4.48e-12!63;UBERON:0002097!7.04e-12!40;UBERON:0001637!2.27e-09!42;UBERON:0003509!2.27e-09!42;UBERON:0004572!2.27e-09!42;UBERON:0003102!3.49e-09!95;UBERON:0000475!1.01e-08!365;UBERON:0004237!3.67e-08!10;UBERON:0004695!3.67e-08!10;UBERON:0002111!3.67e-08!10;UBERON:0004178!3.67e-08!10;UBERON:0004573!4.21e-08!33;UBERON:0004571!4.21e-08!33;UBERON:0005256!1.30e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.99e-15;41!UBERON:0002199;6.44e-15;46!UBERON:0002416;6.44e-15;46!UBERON:0004237;1.47e-12;10!UBERON:0004695;1.47e-12;10!UBERON:0002111;1.47e-12;10!UBERON:0004178;1.47e-12;10!UBERON:0003102;1.16e-10;50!UBERON:0001310;3.92e-08;4!UBERON:0001135;7.25e-08;15!UBERON:0002067;1.46e-07;9!UBERON:0002385;3.61e-07;31!UBERON:0001015;3.61e-07;31!UBERON:0000383;3.61e-07;31!UBERON:0000947;9.00e-07;21!UBERON:0010191;9.00e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.51e-21,46;UBERON:0002416,1.51e-21,46;UBERON:0002097,7.98e-21,41;UBERON:0004237,1.37e-12,10;UBERON:0004695,1.37e-12,10;UBERON:0002111,1.37e-12,10;UBERON:0004178,1.37e-12,10;UBERON:0002329,1.23e-11,71;UBERON:0003059,1.23e-11,71;UBERON:0007282,1.23e-11,71;UBERON:0004290,1.23e-11,71;UBERON:0009618,1.23e-11,71;UBERON:0003077,2.20e-11,72;UBERON:0007285,2.20e-11,72;UBERON:0007524,3.87e-11,73;UBERON:0007503,5.14e-10,78;UBERON:0000486,6.58e-10,83;UBERON:0003102,8.57e-09,99;UBERON:0001310,3.60e-08,4;UBERON:0001135,6.95e-08,15;UBERON:0002067,8.67e-08,9;UBERON:0004016,8.67e-08,9;UBERON:0010083,8.67e-08,9;UBERON:0001637,1.08e-07,42;UBERON:0003509,1.08e-07,42;UBERON:0004572,1.08e-07,42;UBERON:0001134,2.21e-07,62;UBERON:0002036,2.21e-07,62;UBERON:0003082,2.21e-07,62;UBERON:0005256,2.42e-07,122;UBERON:0002385,5.15e-07,64;UBERON:0001015,5.15e-07,64;UBERON:0000383,5.15e-07,64;UBERON:0000947,8.71e-07,21;UBERON:0010191,8.71e-07,21 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,1.89515962028049,0,0,0,0,0,0,0,3.36162573225888,1.80808358407193,1.46062018077475,0.975865597581014,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,2.00535164254356,1.01392563272577,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,0.379891534993739,9.1362334761121,0.573673241497627,0,0,0,0,0,0,0,0,0,0.234321431833797,1.5608003841516,2.2818872861778,1.04614076386261,1.76151747965647,1.94247533241758,1.82586048712923,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.500474079487857,0.554128230968366,0.877955241761676,0.612975591598039,0.150238058906597,0,5.56107870635472,2.77624605464138,2.33125091275518,3.00091096084402,2.26715564324566,5.41045134095821,2.04728541964749,5.90717162844432,1.26668106709558,4.79624171063818,2.02509777013059,0.161646056818812,6.39017266529906,3.62707553619505,1.86516651541536,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23179289394444,0,0,0.26593811658487,0,0,0,0.799266537048298,0,0,0,0.65147236858747,0,0,2.41151501647669,0.871533458600294,1.79951384127703,0,0,0,0.239624855491583,0,2.85273810081437,1.30303176000821,1.84928690295345,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,2.14114786556594,0.157702415033935,0.585707074963566,0.601892199455438,0,0,0.664225598535437,1.47495334833363,1.91143951829782,0,0,0,0,0,0,1.66435439510497,0,1.24053903909388,0.920771839728375,1.12264037773229,0.256278298511402,0.511707249066704,1.93024705372329,0,0.771048469013278,1.42049380250502,1.47828880824856,0.519254429183621,0.348631135379878,0,0,0,1.03333003348146,2.00300284807389,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,3.21367859688319,0.96670718292122,0,0,0.413509717453592,0.107420244868274,0,0,0.445160178233687,0,0,0,0,3.71876439437829,3.1481234683064,1.3940745403212,0,1.06461206063404,1.73986598415015,0.55597265731176,0,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0,0.353437207037059,0.606547444719948,0,0.421258456238981,0,3.65570234446927,0,0.545999645631943,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0,1.62328301570163,1.54911749049875,1.69017361519345,0.286822704408103,0.392996164052485,1.07001315444375,2.12856638442359,1.05553817648832,0.987884678879706,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,4.44547960578548,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0,1.48124672601102,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0,0,0,0,0,0.189932387867636,0,0.240476460754601,0,0,0,0,0.171594997861965,0,0.248505071130865,0,0.407712618220842,0.418411385249333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0.191915197319445,0,0,0,2.71499800876856,6.04955043840887,2.93928624098468,2.39460383124975,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.701139929541673,1.10961172300523,2.27283606330107,2.0125432140206,1.77962244319307,2.28840068396924,0.302461847526478,0.15543720058278,0.147855149989634,1.43367090447332,2.24901556081802,1.39736661188633,0,1.59505028734797,1.5652351854352,1.6528336989694,2.66563648518157,1.62748293281865,0.545545977607678,1.28892668450986,1.39210127963548,0.796191777397232,3.20022211730523,1.03018711554838,0.336749488765919,0,0.385239660814607,0.214441591374926,0.260994291965212,1.58694147858591,1.389134845943,0.489473409012935,0.358177682162975,0.926404341482917,1.31570429747224,5.12398523243055,0.964570191354574,0,0,0,0.607719912354764,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,2.27006381426734,0.736423801007363,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0.558644917973244,0.318004350653419,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,1.90691047733584,0.690359926060101,0,0,0,0,0,0.49131575253029,0,0.067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| |||
|short_description=p@chr12:51986236..51986261,- | |||
}} |
Revision as of 13:29, 11 January 2014
Short description: | p@chr12:51986236..51986261, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:51986236..51986261, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.79e-38 | 23 |
fibroblast | 6.61e-19 | 76 |
aortic smooth muscle cell | 1.37e-12 | 10 |
fibroblast of dermis | 4.53e-12 | 6 |
multi fate stem cell | 8.79e-12 | 427 |
somatic stem cell | 2.34e-11 | 433 |
stem cell | 8.25e-11 | 441 |
vascular associated smooth muscle cell | 1.79e-09 | 32 |
skeletal muscle myoblast | 5.10e-09 | 4 |
muscle precursor cell | 3.34e-08 | 58 |
myoblast | 3.34e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.34e-08 | 58 |
smooth muscle cell of the umbilical artery | 3.60e-08 | 4 |
smooth muscle cell | 2.43e-07 | 43 |
smooth muscle myoblast | 2.43e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
integument | 1.51e-21 | 46 |
integumental system | 1.51e-21 | 46 |
skin of body | 7.98e-21 | 41 |
blood vessel smooth muscle | 1.37e-12 | 10 |
arterial system smooth muscle | 1.37e-12 | 10 |
artery smooth muscle tissue | 1.37e-12 | 10 |
aorta smooth muscle tissue | 1.37e-12 | 10 |
somite | 1.23e-11 | 71 |
presomitic mesoderm | 1.23e-11 | 71 |
presumptive segmental plate | 1.23e-11 | 71 |
dermomyotome | 1.23e-11 | 71 |
trunk paraxial mesoderm | 1.23e-11 | 71 |
paraxial mesoderm | 2.20e-11 | 72 |
presumptive paraxial mesoderm | 2.20e-11 | 72 |
dense mesenchyme tissue | 3.87e-11 | 73 |
epithelial vesicle | 5.14e-10 | 78 |
multilaminar epithelium | 6.58e-10 | 83 |
surface structure | 8.57e-09 | 99 |
umbilical artery | 3.60e-08 | 4 |
smooth muscle tissue | 6.95e-08 | 15 |
dermis | 8.67e-08 | 9 |
dermatome | 8.67e-08 | 9 |
future dermis | 8.67e-08 | 9 |
artery | 1.08e-07 | 42 |
arterial blood vessel | 1.08e-07 | 42 |
arterial system | 1.08e-07 | 42 |
skeletal muscle tissue | 2.21e-07 | 62 |
striated muscle tissue | 2.21e-07 | 62 |
myotome | 2.21e-07 | 62 |
trunk mesenchyme | 2.42e-07 | 122 |
muscle tissue | 5.15e-07 | 64 |
musculature | 5.15e-07 | 64 |
musculature of body | 5.15e-07 | 64 |
aorta | 8.71e-07 | 21 |
aortic system | 8.71e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.34e-12 | 14 |
musculoskeletal system disease | 5.26e-12 | 5 |
myotonic disease | 5.26e-12 | 5 |
muscle tissue disease | 5.26e-12 | 5 |
myopathy | 5.26e-12 | 5 |
muscular disease | 5.26e-12 | 5 |
myotonic dystrophy | 5.26e-12 | 5 |
cell type benign neoplasm | 4.71e-08 | 3 |
leiomyoma | 4.71e-08 | 3 |