FFCP PHASE1:Hg19::chr14:30832699..30832708,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:30832699..30832708,- | |||
|id=chr14:30832699..30832708,- | |||
|ontology_enrichment_celltype=CL:0000066!3.94e-12!254;CL:0002251!2.65e-08!21;CL:0002076!2.75e-08!43;CL:0002553!5.90e-07!1;CL:0000082!9.11e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.78e-26;1!CL:0000082;1.99e-12;19!CL:0000322;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.78e-26,1;CL:0000082,2.15e-12,19;CL:0000322,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.27e-08;29!UBERON:0001041;4.12e-08;30 | |||
|ontology_enrichment_disease=DOID:305!4.84e-23!106;DOID:0050687!6.01e-19!143;DOID:1749!1.88e-17!14;DOID:162!8.30e-15!235;DOID:14566!2.30e-14!239;DOID:1325!3.52e-12!7;DOID:3904!3.52e-12!7;DOID:0050615!2.91e-11!16;DOID:1324!1.19e-08!15;DOID:3151!7.77e-07!1;DOID:3149!7.77e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;7.62e-26;1!DOID:3149;7.62e-26;1!DOID:1324;1.52e-15;15!DOID:1325;4.69e-15;7!DOID:3904;4.69e-15;7!DOID:0050615;1.27e-14;16!DOID:3451;1.21e-13;2!DOID:4159;1.21e-13;2!DOID:0060122;1.21e-13;2!DOID:3910;1.21e-13;2!DOID:3905;6.16e-12;9!DOID:5409;1.80e-07;4!DOID:305;6.00e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.79e-26,1;DOID:3149,9.79e-26,1;DOID:1324,1.67e-15,15;DOID:1325,5.41e-15,7;DOID:3904,5.41e-15,7;DOID:0050615,1.40e-14,16;DOID:3451,1.37e-13,2;DOID:4159,1.37e-13,2;DOID:0060122,1.37e-13,2;DOID:3910,1.55e-13,2;DOID:3905,6.88e-12,9;DOID:305,1.66e-08,106;DOID:5409,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004802!9.11e-07!19;UBERON:0000115!9.11e-07!19;UBERON:0005911!9.47e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.21e-13;2!UBERON:0004903;1.21e-13;2!UBERON:0002173;1.21e-13;2!UBERON:0002186;1.21e-13;2!UBERON:0004802;1.99e-12;19!UBERON:0000115;1.99e-12;19!UBERON:0002048;7.93e-11;22!UBERON:0004807;7.93e-11;22!UBERON:0000117;7.93e-11;22!UBERON:0000171;7.93e-11;22!UBERON:0000170;7.93e-11;22!UBERON:0004821;1.53e-09;3!UBERON:0007499;1.53e-09;3!UBERON:0003215;1.53e-09;3!UBERON:0010368;1.53e-09;3!UBERON:0009911;1.53e-09;3!UBERON:0002299;1.53e-09;3!UBERON:0006524;1.53e-09;3!UBERON:0008874;1.53e-09;3!UBERON:0002169;1.53e-09;3!UBERON:0004894;1.53e-09;3!UBERON:0000014;1.80e-07;4!UBERON:0009856;1.80e-07;4!UBERON:0005911;6.20e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.55e-13,2;UBERON:0002173,1.55e-13,2;UBERON:0002186,1.55e-13,2;UBERON:0004802,2.15e-12,19;UBERON:0000115,2.15e-12,19;UBERON:0002048,8.48e-11,22;UBERON:0000117,8.48e-11,22;UBERON:0000171,8.48e-11,22;UBERON:0000170,8.48e-11,22;UBERON:0005597,8.48e-11,22;UBERON:0000118,8.48e-11,22;UBERON:0004821,1.81e-09,3;UBERON:0003215,1.81e-09,3;UBERON:0010368,1.81e-09,3;UBERON:0009911,1.81e-09,3;UBERON:0002299,1.81e-09,3;UBERON:0006524,1.81e-09,3;UBERON:0008874,1.81e-09,3;UBERON:0002169,1.81e-09,3;UBERON:0004894,1.81e-09,3;UBERON:0004807,1.27e-08,28;UBERON:0000014,1.92e-07,4;UBERON:0005178,3.29e-07,34;UBERON:0002224,3.29e-07,34;UBERON:0005181,5.08e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27586896570999,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0.19980960958213,0,0,0.514784993585894,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53314913167514,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61454712309054,0,0,0.11294608203896,0,1.35866559210006,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.546327859818478,1.77377901416012,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:30832699..30832708,- | |||
}} |
Revision as of 19:34, 11 January 2014
Short description: | p@chr14:30832699..30832708, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:30832699..30832708, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.78e-26 | 1 |
epithelial cell of lung | 2.15e-12 | 19 |
pneumocyte | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.55e-13 | 2 |
alveolar duct | 1.55e-13 | 2 |
bronchiole | 1.55e-13 | 2 |
respiratory tract epithelium | 2.15e-12 | 19 |
lung epithelium | 2.15e-12 | 19 |
lung | 8.48e-11 | 22 |
respiratory tube | 8.48e-11 | 22 |
respiration organ | 8.48e-11 | 22 |
pair of lungs | 8.48e-11 | 22 |
lung primordium | 8.48e-11 | 22 |
lung bud | 8.48e-11 | 22 |
pulmonary alveolus epithelium | 1.81e-09 | 3 |
alveolus | 1.81e-09 | 3 |
pulmonary lobule | 1.81e-09 | 3 |
lobule | 1.81e-09 | 3 |
alveolus of lung | 1.81e-09 | 3 |
alveolar system | 1.81e-09 | 3 |
pulmonary acinus | 1.81e-09 | 3 |
alveolar sac | 1.81e-09 | 3 |
alveolar wall | 1.81e-09 | 3 |
respiratory system epithelium | 1.27e-08 | 28 |
zone of skin | 1.92e-07 | 4 |
thoracic cavity element | 3.29e-07 | 34 |
thoracic cavity | 3.29e-07 | 34 |
thoracic segment organ | 5.08e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.79e-26 | 1 |
keratoacanthoma | 9.79e-26 | 1 |
lung cancer | 1.67e-15 | 15 |
bronchus cancer | 5.41e-15 | 7 |
bronchogenic carcinoma | 5.41e-15 | 7 |
respiratory system cancer | 1.40e-14 | 16 |
skin carcinoma | 1.37e-13 | 2 |
skin cancer | 1.37e-13 | 2 |
integumentary system cancer | 1.37e-13 | 2 |
lung adenocarcinoma | 1.55e-13 | 2 |
lung carcinoma | 6.88e-12 | 9 |
carcinoma | 1.66e-08 | 106 |
lung small cell carcinoma | 1.80e-07 | 4 |