FFCP PHASE1:Hg19::chr17:39974337..39974365,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1227 | |||
|description=CAGE_peak_at_chr17:39974337..39974365,+ | |||
|id=chr17:39974337..39974365,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.75e-33!180;CL:0000057!1.83e-15!75;CL:0000183!2.32e-15!59;CL:0000680!5.03e-14!57;CL:0000056!5.03e-14!57;CL:0000355!5.03e-14!57;CL:0000222!8.22e-14!119;CL:0000192!9.74e-14!42;CL:0000514!9.74e-14!42;CL:0000393!1.80e-13!60;CL:0000211!1.80e-13!60;CL:0000187!2.06e-13!54;CL:0002321!3.88e-13!248;CL:0000220!6.41e-13!246;CL:0000144!8.02e-12!625;CL:0000548!8.17e-12!679;CL:0000004!8.17e-12!679;CL:0000255!8.17e-12!679;CL:0000012!2.92e-11!682;CL:0002371!9.30e-11!591;CL:0000359!1.62e-10!32;CL:0000003!4.11e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.61e-10;43!CL:0000359;4.23e-10;32!CL:0002595;1.00e-07;5!CL:0000134;7.13e-07;55!CL:0000187;9.36e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.13e-16,76;CL:0000192,1.06e-13,43;CL:0000514,1.06e-13,43;CL:0000048,5.90e-12,427;CL:0000187,1.19e-11,55;CL:0000680,1.27e-11,58;CL:0000056,1.27e-11,58;CL:0000355,1.27e-11,58;CL:0000723,2.26e-11,433;CL:0000359,6.95e-11,32;CL:0000034,1.26e-10,441;CL:0000393,1.10e-09,61;CL:0000211,1.10e-09,61;CL:0002595,1.49e-07,5;CL:0002320,5.20e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;2.61e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.53e-13!70;UBERON:0000914!4.03e-13!83;UBERON:0002329!4.03e-13!83;UBERON:0003077!4.03e-13!83;UBERON:0003059!4.03e-13!83;UBERON:0007282!4.03e-13!83;UBERON:0009618!4.03e-13!83;UBERON:0007285!4.03e-13!83;UBERON:0001637!2.84e-12!42;UBERON:0003509!2.84e-12!42;UBERON:0004572!2.84e-12!42;UBERON:0001134!3.78e-12!61;UBERON:0002036!3.78e-12!61;UBERON:0003082!3.78e-12!61;UBERON:0000490!2.24e-11!138;UBERON:0002049!2.56e-11!79;UBERON:0007798!2.56e-11!79;UBERON:0000486!3.94e-11!82;UBERON:0002385!3.95e-11!63;UBERON:0001015!3.95e-11!63;UBERON:0000383!3.95e-11!63;UBERON:0001981!1.54e-10!60;UBERON:0007500!1.54e-10!60;UBERON:0004537!1.54e-10!60;UBERON:0006965!1.54e-10!60;UBERON:0004872!3.32e-10!84;UBERON:0005256!1.23e-09!143;UBERON:0000055!1.23e-09!69;UBERON:0004573!3.83e-09!33;UBERON:0004571!3.83e-09!33;UBERON:0003914!8.42e-09!118;UBERON:0000483!7.54e-08!309;UBERON:0000119!8.94e-08!312;UBERON:0002100!1.01e-07!216;UBERON:0004535!1.51e-07!110;UBERON:0000468!7.39e-07!659;UBERON:0002199!7.52e-07!45;UBERON:0002416!7.52e-07!45;UBERON:0000475!8.35e-07!365;UBERON:0001009!8.63e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.85e-11;33!UBERON:0004571;4.85e-11;33!UBERON:0001637;1.63e-10;42!UBERON:0003509;1.63e-10;42!UBERON:0004572;1.63e-10;42!UBERON:0003834;1.00e-07;5!UBERON:0001533;1.00e-07;5!UBERON:0004905;2.63e-07;8!UBERON:0000982;2.63e-07;8!UBERON:0004770;2.63e-07;8!UBERON:0002384;9.46e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.32e-13,42;UBERON:0003509,1.32e-13,42;UBERON:0004572,1.32e-13,42;UBERON:0007524,2.62e-12,73;UBERON:0007503,4.45e-12,78;UBERON:0004573,6.97e-12,33;UBERON:0004571,6.97e-12,33;UBERON:0002329,7.10e-12,71;UBERON:0003059,7.10e-12,71;UBERON:0007282,7.10e-12,71;UBERON:0004290,7.10e-12,71;UBERON:0009618,7.10e-12,71;UBERON:0003077,1.43e-11,72;UBERON:0007285,1.43e-11,72;UBERON:0004872,3.72e-11,83;UBERON:0000486,1.92e-10,83;UBERON:0001134,2.59e-10,62;UBERON:0002036,2.59e-10,62;UBERON:0003082,2.59e-10,62;UBERON:0002385,9.99e-10,64;UBERON:0001015,9.99e-10,64;UBERON:0000383,9.99e-10,64;UBERON:0007500,2.66e-08,59;UBERON:0001981,2.66e-08,59;UBERON:0004537,2.66e-08,59;UBERON:0006965,2.66e-08,59;UBERON:0002199,4.42e-08,46;UBERON:0002416,4.42e-08,46;UBERON:0000055,9.41e-08,68;UBERON:0003834,1.49e-07,5;UBERON:0001533,1.49e-07,5;UBERON:0004905,1.49e-07,8;UBERON:0000982,1.49e-07,8;UBERON:0004770,1.49e-07,8;UBERON:0003104,1.67e-07,160;UBERON:0009142,1.67e-07,160;UBERON:0004535,1.97e-07,109;UBERON:0002384,2.06e-07,371;UBERON:0002049,4.31e-07,78;UBERON:0007798,4.31e-07,78;UBERON:0003914,5.16e-07,117;UBERON:0001009,5.67e-07,112;UBERON:0005256,8.46e-07,122 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.422863212287913,0,1.78784437770915,6.97870819280295,2.53299878168311,1.26343974685366,0,0.491467873003018,0,0.873765488520689,1.05506791291381,1.11389717664042,2.98257638155124,3.36162573225888,3.01347264011988,2.19093027116212,1.95173119516203,0.61560529038394,0.816002764977012,0.313454721478088,0,1.09499540058307,0.502170558379211,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,2.31754430337318,0,5.35298357332899,0.661743720148475,1.99556457716308,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.838998872419812,2.20094433552054,1.04497483268405,0.258416759169329,0,0,0.805658634218294,0.760272105718513,1.46437234528902,0,7.29127753093584,0.267899184852239,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,4.47274756525787,1.8994576749687,0.397227542439656,4.01571269048339,1.41867352879343,1.68203280042692,0,4.44001587150888,1.55605517699883,1.61652806483626,1.63461903113459,0.908144565869588,0,0,0.624320153660641,0,1.34503812496621,1.17434498643765,0.161872944368132,1.12360645361799,1.02077085627447,1.71968044236475,2.06651562351531,2.37600571456411,3.4617370098998,0,5.74894513452991,0.505008341862199,1.62654075833553,0,0,2.75839016219118,2.40380894250555,0.567160915800105,1.79389635688862,0.427114777637135,1.27159140695737,3.60109315301283,1.13357782162283,1.54584324027377,1.48893485065272,0.843881661206331,1.07180705677318,1.00973509697646,1.19664868234989,0.969876340912871,2.13005755509969,0.403008392910561,0.847802961552438,0,0,0,0.365921118388786,0.397589304964456,0.69716365721711,0,0.504641701751257,0,0,3.85944562915731,1.38134921352481,0.464367928031979,2.16563844500876,0.473227200159376,0.337169380156203,0,0.441175890929576,0.435758888184812,0,0.134831308160164,0,1.15424147083917,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0.977424915930974,0,2.88662684050547,0.115930404975077,0.70445216541493,0.288732895522148,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0.144119953416961,0,0.063497894292169,1.14596527667483,0,0,1.02827492703324,2.70308752059526,0.571652865261156,0.112131084345361,0,0.36669142910475,0.646358578788889,3.57656445851882,0,0.797814349754612,3.12022310734098,0,1.41849132023278,1.5985330740966,0.857867961948885,2.71310802695722,1.64648067356154,0.325736184293735,1.77695974371273,0.791951872933429,0.904318131178758,0,0.899756920638513,0,0,0,0.718874566474748,1.14861935834114,0,0.723906533337896,2.05476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,1.8403723757871,3.00102312635806,2.17012018959788,3.11956292296211,5.17444067511769,1.41932173530541,1.05427273493442,2.10662269809403,20.4666753650386,5.17365356462525,0.664225598535437,1.84369168541703,0.781952530212746,1.56640925970192,3.77457766191941,0,0,0,0,0,1.20956117331872,1.24053903909388,0.460385919864187,4.49056151092918,1.15325234330131,0,0.804269605718038,1.48418066444991,1.69630663182921,2.48586415438378,0.574890092096664,4.15403543346897,1.97557643381931,0.241718899183244,0.802025881213139,0.184161977871793,0.68888668898764,3.27764102412091,2.88473712910733,0,0.770153371044148,2.35304930753057,0,0.211103257785751,1.13733384070897,0.850468526382578,0.215915916102139,0,1.08378575017541,1.00337954770971,0,0,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0.0915694648183434,0.247528499761764,0,1.30012049207304,1.6068392984416,0.193341436584244,1.23238893691716,1.07452572308291,0.689182862422653,0.966782203814463,1.74020032697074,0.340906509664404,0.534192213880424,0.495854746082934,0.576570202095319,0.127612712494584,0.50578890427775,0.929691098594572,5.66662224295152,0,1.54016790088044,0,0,1.8532421910392,5.58187058293766,0.744316738719335,0.632758849437452,0.953150969619124,1.02359116524534,0.855877976067841,1.59101623962968,4.70969184119538,0.359744915166629,1.37268514868027,1.17812402345686,0.606547444719948,0,2.10629228119491,0.48763373908959,3.65570234446927,6.33900880540533,0.409499734223957,3.81794666275024,5.65040583101214,1.10273068709225,6.6343897524122,4.38450885253763,1.15755106853338,2.62357900818653,0.608731130888112,1.8589409885985,1.40847801266121,0.286822704408103,0.589494246078727,0.7133421029625,1.41904425628239,4.85547561184627,1.97576935775941,0,1.74967360122491,0.192444225451024,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.728163130497081,0,0.852408440419239,0.23874448473769,0.59392936166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| |||
|short_description=p@chr17:39974337..39974365,+ | |||
}} |
Revision as of 15:22, 20 January 2014
Short description: | p@chr17:39974337..39974365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39974337..39974365, + |
Coexpression cluster: | C1227_Osteoblast_Smooth_tenocyte_Fibroblast_Chondrocyte_Aortic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.13e-16 | 76 |
smooth muscle cell | 1.06e-13 | 43 |
smooth muscle myoblast | 1.06e-13 | 43 |
multi fate stem cell | 5.90e-12 | 427 |
muscle cell | 1.19e-11 | 55 |
muscle precursor cell | 1.27e-11 | 58 |
myoblast | 1.27e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-11 | 58 |
somatic stem cell | 2.26e-11 | 433 |
vascular associated smooth muscle cell | 6.95e-11 | 32 |
stem cell | 1.26e-10 | 441 |
electrically responsive cell | 1.10e-09 | 61 |
electrically active cell | 1.10e-09 | 61 |
smooth muscle cell of the subclavian artery | 1.49e-07 | 5 |
connective tissue cell | 5.20e-07 | 361 |