FFCP PHASE1:Hg19::chr17:42298201..42298284,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12511 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKP7,P17480 | |||
|association_with_transcript=0bp_to_ENST00000527034,NM_001076683,uc002igd.2_5end | |||
|description=CAGE_peak_1_at_UBTF_5end | |||
|id=chr17:42298201..42298284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-19!115;UBERON:0001049!8.95e-12!57;UBERON:0005068!8.95e-12!57;UBERON:0006241!8.95e-12!57;UBERON:0007135!8.95e-12!57;UBERON:0003080!3.54e-10!42;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0002616!1.19e-09!59;UBERON:0002346!5.17e-09!90;UBERON:0002619!9.47e-09!22;UBERON:0001893!9.55e-09!34;UBERON:0003075!2.03e-08!86;UBERON:0007284!2.03e-08!86;UBERON:0002791!2.10e-08!33;UBERON:0000955!2.29e-08!69;UBERON:0006238!2.29e-08!69;UBERON:0001869!2.98e-08!32;UBERON:0001950!3.90e-08!20;UBERON:0005743!8.13e-08!86;UBERON:0001017!1.50e-07!82;UBERON:0003056!2.06e-07!61;UBERON:0002020!2.07e-07!34;UBERON:0003528!2.07e-07!34;UBERON:0000073!2.50e-07!94;UBERON:0001016!2.50e-07!94;UBERON:0000956!6.13e-07!25;UBERON:0000203!6.13e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.74e-09;22!UBERON:0001950;2.94e-08;20!UBERON:0001893;1.65e-07;34!UBERON:0001869;1.75e-07;32!UBERON:0002780;2.17e-07;41!UBERON:0001890;2.17e-07;41!UBERON:0002791;2.27e-07;32!UBERON:0000956;4.53e-07;25!UBERON:0000203;4.53e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.93e-19,114;UBERON:0001049,2.49e-11,56;UBERON:0005068,2.49e-11,56;UBERON:0006241,2.49e-11,56;UBERON:0007135,2.49e-11,56;UBERON:0000073,3.08e-11,53;UBERON:0002616,3.08e-11,53;UBERON:0002780,1.01e-09,41;UBERON:0001890,1.01e-09,41;UBERON:0003080,1.01e-09,41;UBERON:0006240,1.01e-09,41;UBERON:0002346,5.92e-09,86;UBERON:0002619,9.47e-09,22;UBERON:0001893,9.55e-09,34;UBERON:0003075,2.34e-08,82;UBERON:0007284,2.34e-08,82;UBERON:0001869,2.98e-08,32;UBERON:0001950,3.90e-08,20;UBERON:0000955,5.31e-08,68;UBERON:0006238,5.31e-08,68;UBERON:0010371,5.49e-08,104;UBERON:0002791,5.53e-08,32;UBERON:0003056,1.84e-07,61;UBERON:0003528,2.07e-07,34;UBERON:0002020,2.07e-07,34;UBERON:0001017,3.22e-07,81;UBERON:0000956,6.13e-07,25;UBERON:0000203,6.13e-07,25;UBERON:0001016,9.49e-07,89 | |||
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| |||
|short_description=p1@UBTF | |||
}} |
Revision as of 15:38, 20 January 2014
Short description: | p1@UBTF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBTF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527034, NM_001076683, uc002igd.2_5end |
EntrezGene: | UBTF |
HGNC: | 12511 |
UniProt: | E9PKP7P17480 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.93e-19 | 114 |
neural tube | 2.49e-11 | 56 |
neural rod | 2.49e-11 | 56 |
future spinal cord | 2.49e-11 | 56 |
neural keel | 2.49e-11 | 56 |
regional part of nervous system | 3.08e-11 | 53 |
regional part of brain | 3.08e-11 | 53 |
regional part of forebrain | 1.01e-09 | 41 |
forebrain | 1.01e-09 | 41 |
anterior neural tube | 1.01e-09 | 41 |
future forebrain | 1.01e-09 | 41 |
neurectoderm | 5.92e-09 | 86 |
regional part of cerebral cortex | 9.47e-09 | 22 |
telencephalon | 9.55e-09 | 34 |
neural plate | 2.34e-08 | 82 |
presumptive neural plate | 2.34e-08 | 82 |
cerebral hemisphere | 2.98e-08 | 32 |
neocortex | 3.90e-08 | 20 |
brain | 5.31e-08 | 68 |
future brain | 5.31e-08 | 68 |
ecto-epithelium | 5.49e-08 | 104 |
regional part of telencephalon | 5.53e-08 | 32 |
pre-chordal neural plate | 1.84e-07 | 61 |
brain grey matter | 2.07e-07 | 34 |
gray matter | 2.07e-07 | 34 |
central nervous system | 3.22e-07 | 81 |
cerebral cortex | 6.13e-07 | 25 |
pallium | 6.13e-07 | 25 |
nervous system | 9.49e-07 | 89 |