FFCP PHASE1:Hg19::chr18:77723080..77723086,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr18:77723080..77723086,- | |||
|id=chr18:77723080..77723086,- | |||
|ontology_enrichment_celltype=CL:0000623!1.66e-18!3;CL:0000825!1.66e-18!3;CL:0000084!1.22e-17!25;CL:0000827!1.22e-17!25;CL:0000838!1.86e-16!52;CL:0000542!4.27e-16!53;CL:0000051!4.27e-16!53;CL:0000080!8.09e-10!6;CL:0000791!4.38e-08!18;CL:0000789!4.38e-08!18;CL:0002420!4.38e-08!18;CL:0002419!4.38e-08!18;CL:0000790!4.38e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000625;6.11e-13;11!CL:0000084;1.30e-12;25!CL:0000791;2.70e-08;18!CL:0000789;2.70e-08;18!CL:0002419;2.70e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.49e-13,11;CL:0000084,1.33e-12,25;CL:0000827,1.33e-12,25;CL:0000791,2.80e-08,18;CL:0000789,2.80e-08,18;CL:0002420,2.80e-08,18;CL:0002419,2.80e-08,18;CL:0000790,2.80e-08,18;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.70e-08;18 | |||
|ontology_enrichment_disease=DOID:0060058!2.06e-09!10;DOID:0060060!2.10e-07!1;DOID:0060061!2.10e-07!1;DOID:8691!2.10e-07!1;DOID:178!5.45e-07!1;DOID:326!5.45e-07!1;DOID:3978!5.45e-07!1;DOID:3394!5.45e-07!1;DOID:5844!5.45e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.06e-15!20;UBERON:0002619!3.09e-14!22;UBERON:0000956!1.83e-12!25;UBERON:0000203!1.83e-12!25;UBERON:0001872!1.43e-10!5;UBERON:0001869!1.40e-09!32;UBERON:0002791!2.90e-09!33;UBERON:0002020!5.75e-09!34;UBERON:0003528!5.75e-09!34;UBERON:0001893!5.75e-09!34;UBERON:0002780!2.76e-07!41;UBERON:0001890!2.76e-07!41;UBERON:0006240!2.76e-07!41;UBERON:0003080!4.32e-07!42;UBERON:0002902!7.29e-07!1;UBERON:0009899!7.29e-07!1;UBERON:0002581!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.16e-30;10!UBERON:0000178;1.42e-20;15!UBERON:0000179;1.42e-20;15!UBERON:0000463;1.42e-20;15!UBERON:0000478;3.55e-13;24!UBERON:0002390;3.64e-10;32!UBERON:0000922;9.87e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.06e-30,10;UBERON:0000358,2.06e-30,10;UBERON:0000307,2.06e-30,10;UBERON:0000091,2.06e-30,10;UBERON:0000087,2.06e-30,10;UBERON:0007010,2.06e-30,10;UBERON:0007806,2.06e-30,10;UBERON:0008780,2.06e-30,10;UBERON:0005728,2.06e-30,10;UBERON:0000178,1.37e-20,15;UBERON:0000179,1.37e-20,15;UBERON:0000463,1.37e-20,15;UBERON:0000478,3.48e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,1.06976078313403,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.19215498909928,3.08909847366257,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6804229599104,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.551369397209069,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:77723080..77723086,- | |||
}} |
Revision as of 20:02, 20 January 2014
Short description: | p@chr18:77723080..77723086, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:77723080..77723086, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.49e-13 | 11 |
T cell | 1.33e-12 | 25 |
pro-T cell | 1.33e-12 | 25 |
mature alpha-beta T cell | 2.80e-08 | 18 |
alpha-beta T cell | 2.80e-08 | 18 |
immature T cell | 2.80e-08 | 18 |
mature T cell | 2.80e-08 | 18 |
immature alpha-beta T cell | 2.80e-08 | 18 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.06e-30 | 10 |
blastocyst | 2.06e-30 | 10 |
blastula | 2.06e-30 | 10 |
bilaminar disc | 2.06e-30 | 10 |
inner cell mass | 2.06e-30 | 10 |
cleaving embryo | 2.06e-30 | 10 |
connecting stalk | 2.06e-30 | 10 |
inner cell mass derived epiblast | 2.06e-30 | 10 |
extraembryonic mesoderm | 2.06e-30 | 10 |
blood | 1.37e-20 | 15 |
haemolymphatic fluid | 1.37e-20 | 15 |
organism substance | 1.37e-20 | 15 |
extraembryonic structure | 3.48e-13 | 24 |