FFCP PHASE1:Hg19::chr1:114471926..114471960,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=204851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19006 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SQL3,Q86Z02,B4DZ33 | |||
|association_with_transcript=-35bp_to_ENST00000369554,ENST00000369559,ENST00000443627,NM_152696,NM_198268,uc001eel.2,uc001eem.2_5end | |||
|description=CAGE_peak_5_at_HIPK1_5end | |||
|id=chr1:114471926..114471960,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.20e-28!140;CL:0000037!6.85e-24!172;CL:0000566!6.85e-24!172;CL:0002031!2.63e-23!124;CL:0000766!3.61e-23!76;CL:0000557!6.69e-23!71;CL:0000839!4.75e-22!70;CL:0002057!6.57e-22!42;CL:0000988!1.68e-21!182;CL:0002087!2.06e-21!119;CL:0000860!9.52e-21!45;CL:0002009!1.10e-20!65;CL:0002032!1.68e-20!165;CL:0000837!1.68e-20!165;CL:0002194!2.67e-19!63;CL:0000576!2.67e-19!63;CL:0000040!2.67e-19!63;CL:0000559!2.67e-19!63;CL:0000763!7.26e-18!112;CL:0000049!7.26e-18!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.03e-39;33!CL:0002057;7.03e-39;33!CL:0000473;1.90e-26;39!CL:0000234;1.90e-26;39!CL:0000576;2.70e-22;48!CL:0000766;7.57e-18;69!CL:0002087;1.81e-12;104!CL:0000738;1.03e-10;136!CL:0000624;9.61e-10;6!CL:0000094;3.36e-09;8!CL:0000791;5.11e-09;18!CL:0000789;5.11e-09;18!CL:0002419;5.11e-09;18!CL:0000763;5.33e-09;100!CL:0000623;2.78e-08;3!CL:0000988;3.56e-08;177!CL:0000226;1.93e-07;3!CL:0000842;1.93e-07;3!CL:0000767;3.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.20e-53,136;CL:0000037,2.60e-47,168;CL:0000988,5.84e-44,177;CL:0002031,5.93e-42,120;CL:0000766,7.31e-42,72;CL:0002032,2.99e-40,161;CL:0000837,2.99e-40,161;CL:0000860,3.33e-40,42;CL:0002057,3.33e-40,42;CL:0000557,3.98e-39,67;CL:0000839,4.64e-37,66;CL:0002087,1.55e-35,115;CL:0000763,4.40e-35,108;CL:0000049,4.40e-35,108;CL:0000473,5.27e-34,48;CL:0000234,5.27e-34,48;CL:0002009,1.26e-32,61;CL:0002194,2.48e-29,59;CL:0000576,2.48e-29,59;CL:0000040,2.48e-29,59;CL:0000559,2.48e-29,59;CL:0000134,1.35e-15,354;CL:0002320,6.16e-15,361;CL:0000219,1.27e-12,386;CL:0000048,7.81e-10,427;CL:0000624,1.17e-09,6;CL:0000034,1.51e-09,441;CL:0000723,1.88e-09,433;CL:0000094,2.76e-09,8;CL:0000791,6.27e-09,18;CL:0000789,6.27e-09,18;CL:0002420,6.27e-09,18;CL:0002419,6.27e-09,18;CL:0000790,6.27e-09,18;CL:0000623,2.65e-08,3;CL:0000825,2.65e-08,3;CL:0000226,1.86e-07,3;CL:0000842,1.86e-07,3;CL:0000767,2.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.10e-30;42!CL:0000790;5.11e-09;18!CL:0000049;6.34e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.80e-22!102;UBERON:0003061!1.80e-22!102;UBERON:0001474!9.49e-20!86;UBERON:0002371!1.14e-19!80;UBERON:0002193!1.67e-19!112;UBERON:0004765!1.70e-14!101;UBERON:0001434!1.70e-14!101;UBERON:0002405!3.23e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.02e-36,98;UBERON:0003061,3.02e-36,98;UBERON:0002371,5.33e-35,76;UBERON:0002193,1.17e-31,108;UBERON:0001474,1.34e-31,82;UBERON:0004765,8.90e-28,90;UBERON:0002405,1.63e-26,93;UBERON:0001434,7.23e-24,100;UBERON:0002384,4.87e-14,371;UBERON:0003081,5.92e-11,203;UBERON:0002204,5.08e-10,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.236132343941038,1.96682138424452,3.45446458287491,2.16742572642506,0,0,0,0.0774672005803016,0,1.17440175733939,1.10799081706375,4.41197784434312,5.64228263861215,0,0,0,2.18097358169347,0.377875943688809,3.15359279544161,3.48643555358527,3.70051099219643,2.47765096716083,3.16461631554365,2.30544635876191,1.89185783910868,3.10271112662957,7.74581620300591,0,1.88242339542605,1.63743690034707,1.12361742222542,2.44867113896722,0.641858054152187,5.75403413219137,1.31940520074686,3.59034583718937,2.13112375266347,4.35313857942876,5.10646702222026,4.9825779919646,1.7587406567972,2.60741459210101,2.17188844705117,5.44859552370032,4.05105399586321,4.1140110367315,0,0.850417199860174,0.419317291016752,0.112328631146495,0.600707571366025,0.64290234678832,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,2.93618594685469,2.6759125968766,0,3.36305137788922,0.526768169550154,15.1466522987651,11.3973121197258,4.5232329779892,0,2.60737813306872,1.4203434172042,1.94826728407911,0.557052284425868,1.17842362989935,1.10766947291811,0.541607727530031,0.128091319725675,0.260118695119756,0.328875809207352,0,0,3.41059095272739,1.87278579662799,3.1360657141493,0.113309342697566,0,1.03088233644789,0.759059076058509,0,0,0,0.451725357233318,0,1.24930726552346,0,0,9.27391018833769,7.75576567772171,11.1514790989755,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.0945348171640679,0,0,0.72038491523742,0.364295288292542,0,1.9472843619281,0.348259474598534,0.531831842075461,1.90792499444274,1.14398982156026,0.74291500265913,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,1.32438929824395,0.122988438543114,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0.702012795417713,0.297262324577456,0,0.16798212819886,0,0.179117045405697,0,0,1.47798971368783,0,1.24396869324463,1.8735593944205,1.8936365013957,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.179060963239896,0,6.89607660706745,6.90008239550455,5.77543663258868,0,0,0,0.167516265334349,0,0,2.99161459204025,2.07207756718018,0,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,5.39285502046542,3.09509917629989,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0.184161977871793,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,2.63111851975121,1.3071772551245,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.50578890427775,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0.842516912477962,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0.443430153536676,0,0,2.29391162142713,0.569647187174163,0.714695326373367,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0.245040215981032,0.371606350251437,0.144269212976445,0.142283686696828,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0.481764225311099,0.201799707191048,0,1.03051603426729,0.307240764308458,0.447352215784832,0.667396566847634,0,0,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0.284136146806413,0.47748896947538,0,0,1.9882952955326,0.281338832821026,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.269605053441981,1.61119057208048,0,0,0,0,0,0.74214478529481,0,1.04171104434093,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,1.77148277162768,0.482385754501632,0,1.3269511191747,0.886642856860642,0.438770794307945,0.10893846351899,0.278847488557207,0.0769502585037971,0.227884111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| |||
|short_description=p5@HIPK1 | |||
}} |
Revision as of 20:15, 10 January 2014
Short description: | p5@HIPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HIPK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000369554, ENST00000369559, ENST00000443627, NM_152696, NM_198268, uc001eel.2, uc001eem.2_5end |
EntrezGene: | HIPK1 |
HGNC: | 19006 |
UniProt: | Q5SQL3Q86Z02B4DZ33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.02e-36 | 98 |
blood island | 3.02e-36 | 98 |
bone marrow | 5.33e-35 | 76 |
hemolymphoid system | 1.17e-31 | 108 |
bone element | 1.34e-31 | 82 |
skeletal element | 8.90e-28 | 90 |
immune system | 1.63e-26 | 93 |
skeletal system | 7.23e-24 | 100 |
connective tissue | 4.87e-14 | 371 |
lateral plate mesoderm | 5.92e-11 | 203 |
musculoskeletal system | 5.08e-10 | 167 |