FFCP PHASE1:Hg19::chr1:40811665..40811670,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2301 | |||
|description=CAGE_peak_at_chr1:40811665..40811670,+ | |||
|id=chr1:40811665..40811670,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.66e-43!63;CL:0000576!4.66e-43!63;CL:0000040!4.66e-43!63;CL:0000559!4.66e-43!63;CL:0002009!6.87e-43!65;CL:0000557!3.61e-39!71;CL:0002057!4.54e-39!42;CL:0000766!7.82e-39!76;CL:0000839!2.13e-38!70;CL:0000860!1.66e-35!45;CL:0000738!3.48e-35!140;CL:0002087!1.84e-34!119;CL:0002031!1.47e-30!124;CL:0000763!4.43e-25!112;CL:0000049!4.43e-25!112;CL:0000037!4.48e-24!172;CL:0000566!4.48e-24!172;CL:0002032!3.35e-23!165;CL:0000837!3.35e-23!165;CL:0000988!2.20e-22!182;CL:0002393!2.66e-12!9;CL:0002397!2.66e-12!9;CL:0000990!2.72e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.54e-33;48!CL:0000473;1.75e-26;39!CL:0000234;1.75e-26;39!CL:0000860;5.71e-26;33!CL:0002057;5.71e-26;33!CL:0000766;2.90e-18;69!CL:0000990;6.78e-13;8!CL:0000875;1.18e-11;3!CL:0002396;1.18e-11;3!CL:0002619;2.61e-11;3!CL:0000763;6.93e-11;100!CL:0000738;9.43e-11;136!CL:0000451;2.03e-10;10!CL:0002393;1.72e-09;6!CL:0002397;1.72e-09;6!CL:0002087;2.59e-09;104!CL:0000235;3.91e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.78e-60,59;CL:0000576,1.78e-60,59;CL:0000040,1.78e-60,59;CL:0000559,1.78e-60,59;CL:0002009,3.21e-58,61;CL:0000839,3.58e-53,66;CL:0000557,2.98e-52,67;CL:0000473,1.22e-51,48;CL:0000234,1.22e-51,48;CL:0000766,6.80e-51,72;CL:0000860,8.59e-44,42;CL:0002057,8.59e-44,42;CL:0000738,1.17e-38,136;CL:0002087,1.43e-38,115;CL:0000763,3.06e-37,108;CL:0000049,3.06e-37,108;CL:0002031,1.33e-32,120;CL:0000037,3.13e-29,168;CL:0000988,1.18e-28,177;CL:0002032,9.24e-28,161;CL:0000837,9.24e-28,161;CL:0002393,1.73e-18,9;CL:0002397,1.73e-18,9;CL:0000990,7.66e-13,8;CL:0000875,1.15e-11,3;CL:0002396,1.15e-11,3;CL:0002619,2.62e-11,3;CL:0000451,2.24e-10,10;CL:0000235,3.92e-09,6;CL:0000134,6.13e-09,354;CL:0002320,1.46e-08,361;CL:0000219,3.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.80e-29;42!CL:0000049;2.72e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.52e-41!102;UBERON:0003061!4.52e-41!102;UBERON:0002193!1.99e-38!112;UBERON:0002371!2.06e-34!80;UBERON:0002405!8.22e-31!115;UBERON:0001474!9.94e-31!86;UBERON:0004765!1.67e-23!101;UBERON:0001434!1.67e-23!101;UBERON:0003081!5.63e-17!216;UBERON:0007023!2.18e-16!115;UBERON:0002204!1.38e-09!167;UBERON:0000178!2.84e-07!15;UBERON:0000179!2.84e-07!15;UBERON:0000463!2.84e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.23e-12;15!UBERON:0000179;7.23e-12;15!UBERON:0000463;7.23e-12;15!UBERON:0002390;3.51e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-57,98;UBERON:0003061,2.20e-57,98;UBERON:0002193,8.37e-54,108;UBERON:0002371,6.85e-48,76;UBERON:0001474,9.78e-44,82;UBERON:0002405,2.21e-42,93;UBERON:0004765,4.74e-39,90;UBERON:0001434,3.05e-34,100;UBERON:0003081,9.81e-25,203;UBERON:0002204,4.59e-18,167;UBERON:0000926,8.61e-13,315;UBERON:0004120,8.61e-13,315;UBERON:0006603,8.61e-13,315;UBERON:0000178,6.93e-12,15;UBERON:0000179,6.93e-12,15;UBERON:0000463,6.93e-12,15;UBERON:0002384,4.74e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0.309868802321207,0,0,3.32397245119126,0.200544447470142,0.217010870715852,3.58264758783879,5.50619232232265,7.21211589375722,1.59938062657521,1.51150377475524,1.21292030593908,0.232429036905685,0,0.309706370895104,3.45230870786581,5.37937483711111,4.02019790810595,0.344745680736619,0,2.70852973188684,0.564727018627814,0.545812300115692,0.224723484445085,1.22433556948361,1.28371610830437,0.639337125799041,4.28806690242731,12.3667467725412,15.344091019177,0.870627715885752,0,0.622822248995575,6.28121663141858,8.86520961314342,3.9093992046921,1.81619850790011,0,0.632924774881769,4.01385043992689,4.25208599930087,4.61249020118427,0.112328631146495,1.05123824989054,1.92870704036496,6.84030584978997,7.55883373356542,13.3344832248183,0,1.09227722252426,2.66852776159066,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0.668462741311041,0,0.221533894583621,0,1.28091319725675,1.43065282315866,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,4.54366351116557,2.61194605948901,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,0.936017060556951,2.22946743433092,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,4.86495122564762,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.72571360654893,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,1.52927441428475,1.70894156152249,1.19115887728894,1.23408681925858,0,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,1.18608451472249,0,0,0.202203398942031,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,4.20619766846903,0,0.916641696046735,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.747511887973863,0.471612915298998,2.48543433208317,3.96932817449561,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0.443716206147409,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,1.19578356282027,2.45348091383766,0,0,0,0.999936979274649,0,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.478901577171454,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,1.50374268767766,0.386747327841463,0,0,0,0,0,0,0.860037498908708,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.426467963801962,0,0,0.124149428591716,0,0,0,0,0,0.80822463617505,0.573777643141411,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p@chr1:40811665..40811670,+ | |||
}} |
Revision as of 18:03, 10 January 2014
Short description: | p@chr1:40811665..40811670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40811665..40811670, + |
Coexpression cluster: | C2301_CD14CD16_CD14_migratory_Dendritic_Basophils_Macrophage_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-57 | 98 |
blood island | 2.20e-57 | 98 |
hemolymphoid system | 8.37e-54 | 108 |
bone marrow | 6.85e-48 | 76 |
bone element | 9.78e-44 | 82 |
immune system | 2.21e-42 | 93 |
skeletal element | 4.74e-39 | 90 |
skeletal system | 3.05e-34 | 100 |
lateral plate mesoderm | 9.81e-25 | 203 |
musculoskeletal system | 4.59e-18 | 167 |
mesoderm | 8.61e-13 | 315 |
mesoderm-derived structure | 8.61e-13 | 315 |
presumptive mesoderm | 8.61e-13 | 315 |
blood | 6.93e-12 | 15 |
haemolymphatic fluid | 6.93e-12 | 15 |
organism substance | 6.93e-12 | 15 |
connective tissue | 4.74e-08 | 371 |