FFCP PHASE1:Hg19::chr2:241544820..241544829,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4492 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HC97,A8K2J1 | |||
|association_with_transcript=0bp_to_NM_001195381,NM_001195382_5end | |||
|coexpression_cluster_id=C2192 | |||
|description=CAGE_peak_6_at_GPR35_5end | |||
|id=chr2:241544820..241544829,+ | |||
|ontology_enrichment_celltype=CL:0000223!8.72e-10!59;CL:0002178!1.06e-08!3;CL:0000181!4.40e-08!12;CL:0000417!4.40e-08!12;CL:0000668!4.40e-08!12;CL:0000414!4.40e-08!12;CL:0000412!4.40e-08!12;CL:0000182!4.40e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.29e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.59e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.99e-20;13!UBERON:0004161;1.78e-15;11!UBERON:0001041;4.28e-12;30!UBERON:0003104;2.57e-08;31!UBERON:0006595;1.04e-07;86 | |||
|ontology_enrichment_disease=DOID:4929!1.36e-12!2;DOID:3493!1.52e-12!2;DOID:299!1.40e-10!25;DOID:305!1.48e-10!106;DOID:3119!3.38e-10!14;DOID:0050687!5.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.02e-07;14!DOID:299;5.96e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.90e-08,106;DOID:3119,3.12e-07,14;DOID:299,6.25e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.94e-33!35;UBERON:0000160!5.39e-28!27;UBERON:0004921!4.39e-27!129;UBERON:0004185!4.39e-27!129;UBERON:0001007!1.64e-25!155;UBERON:0001555!1.64e-25!155;UBERON:0007026!1.64e-25!155;UBERON:0004119!6.12e-23!169;UBERON:0000925!6.12e-23!169;UBERON:0006595!6.12e-23!169;UBERON:0002294!4.75e-20!7;UBERON:0001173!4.75e-20!7;UBERON:0004912!4.75e-20!7;UBERON:0000059!7.37e-19!11;UBERON:0009497!3.37e-17!25;UBERON:0000015!3.37e-17!25;UBERON:0002423!3.37e-17!25;UBERON:0006235!3.37e-17!25;UBERON:0004161!3.37e-17!25;UBERON:0000077!1.59e-16!130;UBERON:0009856!1.63e-16!26;UBERON:0001155!2.36e-16!9;UBERON:0009854!5.43e-15!23;UBERON:0007499!1.09e-13!25;UBERON:0002394!1.59e-13!4;UBERON:0003928!1.59e-13!4;UBERON:0003929!5.75e-13!54;UBERON:0008835!3.63e-12!22;UBERON:0003894!3.63e-12!22;UBERON:0001041!1.49e-11!98;UBERON:0004907!7.29e-11!5;UBERON:0005911!8.02e-11!82;UBERON:0000481!5.29e-10!347;UBERON:0002108!9.32e-10!14;UBERON:0002110!2.55e-08!3;UBERON:0006242!2.55e-08!3;UBERON:0004913!3.20e-07!1;UBERON:0003703!3.20e-07!1;UBERON:0001174!3.20e-07!1;UBERON:0004914!3.20e-07!1;UBERON:0003104!5.80e-07!238;UBERON:0009142!5.80e-07!238;UBERON:0000945!5.86e-07!8;UBERON:0010039!5.86e-07!8;UBERON:0001154!6.49e-07!1;UBERON:0001153!6.49e-07!1;UBERON:0002372!8.18e-07!1;UBERON:0001961!8.18e-07!1;UBERON:0001744!8.18e-07!1;UBERON:0001735!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.55e-46;17!UBERON:0005409;2.60e-44;22!UBERON:0002108;5.51e-34;4!UBERON:0004921;2.64e-25;33!UBERON:0000059;1.11e-15;11!UBERON:0002114;1.23e-14;2!UBERON:0002423;1.38e-14;25!UBERON:0004913;1.32e-11;1!UBERON:0003703;1.32e-11;1!UBERON:0001174;1.32e-11;1!UBERON:0004914;1.32e-11;1!UBERON:0001155;2.51e-11;9!UBERON:0002394;3.24e-11;4!UBERON:0003928;3.24e-11;4!UBERON:0001007;1.75e-10;81!UBERON:0002107;4.70e-09;19!UBERON:0006925;4.70e-09;19!UBERON:0001555;2.74e-08;54!UBERON:0002294;8.84e-07;7!UBERON:0001173;8.84e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.69e-46,17;UBERON:0005409,4.36e-39,25;UBERON:0002108,4.28e-34,4;UBERON:0004921,2.79e-20,118;UBERON:0008835,1.19e-16,22;UBERON:0003894,1.19e-16,22;UBERON:0001007,4.12e-16,145;UBERON:0001555,4.12e-16,145;UBERON:0007026,4.12e-16,145;UBERON:0009854,6.53e-16,23;UBERON:0000059,9.90e-16,11;UBERON:0002114,9.97e-15,2;UBERON:0007499,1.30e-14,25;UBERON:0009497,1.30e-14,25;UBERON:0000015,1.30e-14,25;UBERON:0002423,1.30e-14,25;UBERON:0006235,1.30e-14,25;UBERON:0004161,1.30e-14,25;UBERON:0004119,2.14e-14,160;UBERON:0000925,2.14e-14,160;UBERON:0006595,2.14e-14,160;UBERON:0009856,4.90e-14,26;UBERON:0004913,1.07e-11,1;UBERON:0003703,1.07e-11,1;UBERON:0001174,1.07e-11,1;UBERON:0004914,1.07e-11,1;UBERON:0001155,2.18e-11,9;UBERON:0011216,5.37e-11,223;UBERON:0002107,4.95e-09,19;UBERON:0006925,4.95e-09,19;UBERON:0008836,4.95e-09,19;UBERON:0003929,9.38e-09,54;UBERON:0002394,7.58e-08,6;UBERON:0003928,7.58e-08,6;UBERON:0005911,3.66e-07,82;UBERON:0001041,9.90e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,3.98104772431402,3.80367527364358,5.49927130440263,0,0,0,0.067401132980677,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,3.16998917739033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.9937609276745,2.96697090172199,3.30277364885506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77427303460454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,2.07260472469858,0,0,0,0,0,0,0,0,0,0,7.87176412701035,6.99390593612663,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.134704106029175,0.215166616178029,0,0,0,0,0.898252021065869,0,0,0,0,0,0 | |||
|short_description=p6@GPR35 | |||
}} |
Revision as of 09:35, 21 January 2014
Short description: | p6@GPR35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPR35_5end |
Coexpression cluster: | C2192_small_signet_gastric_adenocarcinoma_colon_bile_duodenum |
Association with transcript: | 0bp_to_NM_001195381, NM_001195382_5end |
EntrezGene: | GPR35 |
HGNC: | 4492 |
UniProt: | Q9HC97A8K2J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.59e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.69e-46 | 17 |
gastrointestinal system | 4.36e-39 | 25 |
small intestine | 4.28e-34 | 4 |
subdivision of digestive tract | 2.79e-20 | 118 |
hepatic diverticulum | 1.19e-16 | 22 |
liver primordium | 1.19e-16 | 22 |
digestive system | 4.12e-16 | 145 |
digestive tract | 4.12e-16 | 145 |
primitive gut | 4.12e-16 | 145 |
digestive tract diverticulum | 6.53e-16 | 23 |
large intestine | 9.90e-16 | 11 |
duodenum | 9.97e-15 | 2 |
epithelial sac | 1.30e-14 | 25 |
epithelium of foregut-midgut junction | 1.30e-14 | 25 |
anatomical boundary | 1.30e-14 | 25 |
hepatobiliary system | 1.30e-14 | 25 |
foregut-midgut junction | 1.30e-14 | 25 |
septum transversum | 1.30e-14 | 25 |
endoderm-derived structure | 2.14e-14 | 160 |
endoderm | 2.14e-14 | 160 |
presumptive endoderm | 2.14e-14 | 160 |
sac | 4.90e-14 | 26 |
hepatopancreatic ampulla | 1.07e-11 | 1 |
extrahepatic bile duct | 1.07e-11 | 1 |
common bile duct | 1.07e-11 | 1 |
duodenal papilla | 1.07e-11 | 1 |
colon | 2.18e-11 | 9 |
organ system subdivision | 5.37e-11 | 223 |
liver | 4.95e-09 | 19 |
digestive gland | 4.95e-09 | 19 |
liver bud | 4.95e-09 | 19 |
gut epithelium | 9.38e-09 | 54 |
bile duct | 7.58e-08 | 6 |
digestive system duct | 7.58e-08 | 6 |
endo-epithelium | 3.66e-07 | 82 |
foregut | 9.90e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.90e-08 | 106 |
gastrointestinal system cancer | 3.12e-07 | 14 |
adenocarcinoma | 6.25e-07 | 25 |