FFCP PHASE1:Hg19::chr2:47077315..47077335,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:47077315..47077335,+ | |||
|id=chr2:47077315..47077335,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.00e-30!180;CL:0000183!7.01e-28!59;CL:0000680!2.60e-27!57;CL:0000056!2.60e-27!57;CL:0000355!2.60e-27!57;CL:0000187!1.26e-26!54;CL:0000192!3.18e-23!42;CL:0000514!3.18e-23!42;CL:0000393!1.24e-22!60;CL:0000211!1.24e-22!60;CL:0000057!1.02e-16!75;CL:0000048!2.80e-16!430;CL:0000723!1.38e-15!436;CL:0000034!3.56e-15!444;CL:0000359!3.90e-15!32;CL:0000222!3.83e-13!119;CL:0000144!2.68e-10!625;CL:0002371!3.21e-09!591;CL:0002334!1.42e-08!12;CL:0002494!5.29e-08!16;CL:0000548!8.44e-07!679;CL:0000004!8.44e-07!679;CL:0000255!8.44e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.00e-12;43!CL:0000359;5.37e-10;32!CL:0002539;1.15e-09;10!CL:0002334;4.07e-08;12!CL:0000134;7.48e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.48e-14,43;CL:0000514,1.48e-14,43;CL:0000048,1.00e-10,427;CL:0000187,1.09e-10,55;CL:0000723,1.96e-10,433;CL:0000359,2.83e-10,32;CL:0000034,4.67e-10,441;CL:0000680,5.63e-10,58;CL:0000056,5.63e-10,58;CL:0000355,5.63e-10,58;CL:0002539,1.02e-09,10;CL:0000393,2.46e-09,61;CL:0000211,2.46e-09,61;CL:0002334,3.99e-08,12;CL:0000057,5.40e-08,76 | |||
|ontology_enrichment_development_v019=CL:0000514;3.00e-12;43 | |||
|ontology_enrichment_disease=DOID:2394!2.29e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.10e-13;3!DOID:127;4.10e-13;3!DOID:0060072;6.15e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.21e-13,3;DOID:127,4.21e-13,3;DOID:0060072,6.27e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.32e-24!61;UBERON:0002036!1.32e-24!61;UBERON:0003082!1.32e-24!61;UBERON:0002385!1.42e-24!63;UBERON:0001015!1.42e-24!63;UBERON:0000383!1.42e-24!63;UBERON:0004290!1.91e-24!70;UBERON:0000914!2.69e-20!83;UBERON:0002329!2.69e-20!83;UBERON:0003077!2.69e-20!83;UBERON:0003059!2.69e-20!83;UBERON:0007282!2.69e-20!83;UBERON:0009618!2.69e-20!83;UBERON:0007285!2.69e-20!83;UBERON:0000486!9.47e-19!82;UBERON:0005256!4.89e-13!143;UBERON:0001637!2.21e-11!42;UBERON:0003509!2.21e-11!42;UBERON:0004572!2.21e-11!42;UBERON:0000490!2.86e-11!138;UBERON:0004573!1.11e-09!33;UBERON:0004571!1.11e-09!33;UBERON:0004872!1.76e-09!84;UBERON:0002100!4.76e-09!216;UBERON:0004535!1.36e-08!110;UBERON:0002049!2.57e-08!79;UBERON:0007798!2.57e-08!79;UBERON:0001009!4.41e-08!113;UBERON:0003914!9.33e-08!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.80e-10;33!UBERON:0004571;1.80e-10;33!UBERON:0004237;1.15e-09;10!UBERON:0004695;1.15e-09;10!UBERON:0002111;1.15e-09;10!UBERON:0004178;1.15e-09;10!UBERON:0000947;2.06e-08;21!UBERON:0010191;2.06e-08;21!UBERON:0001637;2.51e-08;42!UBERON:0003509;2.51e-08;42!UBERON:0004572;2.51e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.42e-12,33;UBERON:0004571,2.42e-12,33;UBERON:0001637,6.04e-11,42;UBERON:0003509,6.04e-11,42;UBERON:0004572,6.04e-11,42;UBERON:0004237,1.02e-09,10;UBERON:0004695,1.02e-09,10;UBERON:0002111,1.02e-09,10;UBERON:0004178,1.02e-09,10;UBERON:0001134,3.90e-09,62;UBERON:0002036,3.90e-09,62;UBERON:0003082,3.90e-09,62;UBERON:0002385,9.37e-09,64;UBERON:0001015,9.37e-09,64;UBERON:0000383,9.37e-09,64;UBERON:0000947,1.94e-08,21;UBERON:0010191,1.94e-08,21;UBERON:0000926,3.03e-08,315;UBERON:0004120,3.03e-08,315;UBERON:0006603,3.03e-08,315;UBERON:0007503,1.05e-07,78;UBERON:0002329,1.35e-07,71;UBERON:0003059,1.35e-07,71;UBERON:0007282,1.35e-07,71;UBERON:0004290,1.35e-07,71;UBERON:0009618,1.35e-07,71;UBERON:0003077,1.88e-07,72;UBERON:0007285,1.88e-07,72;UBERON:0007524,2.61e-07,73;UBERON:0004872,2.71e-07,83;UBERON:0007500,4.52e-07,59;UBERON:0001981,4.52e-07,59;UBERON:0004537,4.52e-07,59;UBERON:0006965,4.52e-07,59;UBERON:0000055,5.99e-07,68;UBERON:0005256,8.35e-07,122 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.704772020479856,0,0,0.872338524100369,0,1.26343974685366,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,1.02000345622126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,7.0176865831006,4.01571269048339,0,0,2.1349799145941,0.24666754841716,0.311211035399766,0.134710672069688,0.980771418680752,1.05950199351452,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,2.73048408581408,0.718618141816238,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,1.05965950579781,0,0.309157587715317,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,1.59562869950922,1.04007436911366,0.514414748524284,1.41849132023278,1.8649552531127,0.285955987316295,0,1.64648067356154,0,0,0,1.20575750823834,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.468565659970853,0,0,0,0,0.921845842708516,0,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,2.91577749247319,0.561320188866147,1.28139149255701,0,0.965123526861645,0,0.616838775210622,4.43904313282818,3.36721339656617,0,3.48631135379878,0,0,0,1.37777337797528,0.364182336013434,1.18011973463482,0,0,0,0,0,0,0,0,0,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.460511024178389,0.413509717453592,0.107420244868274,0.435050081742686,0.767039646744908,0.0890320356467374,0,0,0,0,0,1.5740617341532,4.8792608911242,1.23213432070436,2.66153015158511,6.08953094452551,0.9266210955196,0.572499546967965,0.744316738719335,0,0.38126038784765,1.535386747868,0,11.1371136774078,0.78494864019923,0.359744915166629,0.823611089208164,0.942499218765491,0.808729926293264,1.58510321173008,0,0.48763373908959,0.243713489631284,1.05650146756755,1.50149902548784,0.282810863907425,1.13008116620243,6.06501877900737,0,0.438450885253763,2.31510213706675,0,0.202910376962704,0.6196469961995,0.845086807596724,0.143411352204052,0,0,2.83808851256478,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,3.25799761052228,8.64221491201268,3.5924609612035,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,1.49254802886874,0.934853239388898,3.88364103051829,1.32582103692562,0,0.889811221596536,0,9.22508634955758,3.41961841282117,0.887130899937803,0.477890301491107,0,0.465788870628778,8.29412415681711,1.86089200190596,0,0.150257608997218,0.761610424337591,0.406870733204662,1.27294061441792,0.429642228169954,1.39210127963548,0.398095888698616,0,0.686791410365586,1.34699795506368,0,0,0,0,0.226705925512272,0,0,0.71635536432595,0.308801447160972,0.219284049578707,0.353378291891762,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0.924351257262837,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:47077315..47077335,+ | |||
}} |
Revision as of 02:58, 21 January 2014
Short description: | p@chr2:47077315..47077335, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47077315..47077335, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.48e-14 | 43 |
smooth muscle myoblast | 1.48e-14 | 43 |
multi fate stem cell | 1.00e-10 | 427 |
muscle cell | 1.09e-10 | 55 |
somatic stem cell | 1.96e-10 | 433 |
vascular associated smooth muscle cell | 2.83e-10 | 32 |
stem cell | 4.67e-10 | 441 |
muscle precursor cell | 5.63e-10 | 58 |
myoblast | 5.63e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.63e-10 | 58 |
aortic smooth muscle cell | 1.02e-09 | 10 |
electrically responsive cell | 2.46e-09 | 61 |
electrically active cell | 2.46e-09 | 61 |
preadipocyte | 3.99e-08 | 12 |
fibroblast | 5.40e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.21e-13 | 3 |
leiomyoma | 4.21e-13 | 3 |
benign neoplasm | 6.27e-10 | 4 |