FFCP PHASE1:Hg19::chr2:55844849..55844865,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29267 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_uc002rze.2_5end | |||
|description=CAGE_peak_4_at_SMEK2_5end | |||
|id=chr2:55844849..55844865,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.98e-20!235;DOID:14566!6.52e-19!239;DOID:305!2.54e-16!106;DOID:0050687!1.45e-15!143;DOID:0050686!8.50e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.81e-20,235;DOID:14566,1.60e-18,239;DOID:305,7.63e-17,106;DOID:0050687,5.20e-16,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-09!57;UBERON:0005068!1.68e-09!57;UBERON:0006241!1.68e-09!57;UBERON:0007135!1.68e-09!57;UBERON:0000073!4.40e-09!94;UBERON:0001016!4.40e-09!94;UBERON:0001017!6.49e-09!82;UBERON:0005743!7.66e-09!86;UBERON:0003080!1.82e-07!42;UBERON:0002780!1.91e-07!41;UBERON:0001890!1.91e-07!41;UBERON:0006240!1.91e-07!41;UBERON:0000955!3.49e-07!69;UBERON:0006238!3.49e-07!69;UBERON:0002346!8.51e-07!90;UBERON:0002616!9.30e-07!59;UBERON:0003075!9.42e-07!86;UBERON:0007284!9.42e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.60e-10,56;UBERON:0005068,2.60e-10,56;UBERON:0006241,2.60e-10,56;UBERON:0007135,2.60e-10,56;UBERON:0000073,4.15e-09,53;UBERON:0002616,4.15e-09,53;UBERON:0001017,4.20e-09,81;UBERON:0001016,5.56e-09,89;UBERON:0002780,8.43e-08,41;UBERON:0001890,8.43e-08,41;UBERON:0003080,8.43e-08,41;UBERON:0006240,8.43e-08,41;UBERON:0000955,1.55e-07,68;UBERON:0006238,1.55e-07,68;UBERON:0011216,6.27e-07,223 | |||
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| |||
|short_description=p4@SMEK2 | |||
}} |
Revision as of 03:16, 21 January 2014
Short description: | p4@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_uc002rze.2_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.60e-10 | 56 |
neural rod | 2.60e-10 | 56 |
future spinal cord | 2.60e-10 | 56 |
neural keel | 2.60e-10 | 56 |
regional part of nervous system | 4.15e-09 | 53 |
regional part of brain | 4.15e-09 | 53 |
central nervous system | 4.20e-09 | 81 |
nervous system | 5.56e-09 | 89 |
regional part of forebrain | 8.43e-08 | 41 |
forebrain | 8.43e-08 | 41 |
anterior neural tube | 8.43e-08 | 41 |
future forebrain | 8.43e-08 | 41 |
brain | 1.55e-07 | 68 |
future brain | 1.55e-07 | 68 |
organ system subdivision | 6.27e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.81e-20 | 235 |
disease of cellular proliferation | 1.60e-18 | 239 |
carcinoma | 7.63e-17 | 106 |
cell type cancer | 5.20e-16 | 143 |