FFCP PHASE1:Hg19::chr2:56145014..56145064,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56145014..56145064,+ | |||
|id=chr2:56145014..56145064,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.17e-26!119;CL:0000213!2.86e-17!57;CL:0000215!2.86e-17!57;CL:0002139!7.05e-17!24;CL:0000055!2.55e-15!180;CL:0000220!2.85e-15!246;CL:0002321!9.84e-15!248;CL:0000071!1.12e-12!18;CL:0002546!1.12e-12!18;CL:0002078!3.43e-12!44;CL:0000076!6.10e-12!62;CL:0000115!1.61e-11!35;CL:0000680!5.14e-11!57;CL:0000056!5.14e-11!57;CL:0000355!5.14e-11!57;CL:0000187!6.18e-11!54;CL:0000057!4.21e-10!75;CL:0000183!8.53e-10!59;CL:0000393!2.82e-09!60;CL:0000211!2.82e-09!60;CL:0000192!1.70e-08!42;CL:0000514!1.70e-08!42;CL:0000359!3.02e-08!32;CL:1000413!5.09e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.06e-22;24!CL:0000071;1.59e-16;18!CL:0000115;4.38e-14;36!CL:0000213;9.80e-13;58!CL:0000215;9.80e-13;58!CL:0002078;3.09e-12;45!CL:1000413;5.14e-09;9!CL:0002138;2.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.46e-29,121;CL:0000213,9.20e-23,58;CL:0000215,9.20e-23,58;CL:0002139,2.62e-22,24;CL:0002078,2.23e-17,45;CL:0000071,1.30e-16,18;CL:0002546,1.30e-16,18;CL:0000115,1.45e-16,36;CL:0002321,8.20e-13,250;CL:0000057,1.15e-11,76;CL:0000076,2.32e-11,63;CL:0000187,1.35e-09,55;CL:0000680,4.14e-09,58;CL:0000056,4.14e-09,58;CL:0000355,4.14e-09,58;CL:1000413,5.85e-09,9;CL:0000393,1.18e-07,61;CL:0000211,1.18e-07,61;CL:0000192,1.29e-07,43;CL:0000514,1.29e-07,43;CL:0005020,2.89e-07,6;CL:0002138,2.89e-07,6;CL:0005022,2.89e-07,6;CL:0000359,3.29e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;1.59e-16;18!CL:0000222;2.35e-08;121!CL:0005022;2.74e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.06e-26!84;UBERON:0002049!1.55e-25!79;UBERON:0007798!1.55e-25!79;UBERON:0000055!1.55e-22!69;UBERON:0001009!2.87e-21!113;UBERON:0004535!5.37e-21!110;UBERON:0001981!5.96e-21!60;UBERON:0007500!5.96e-21!60;UBERON:0004537!5.96e-21!60;UBERON:0006965!5.96e-21!60;UBERON:0003914!6.91e-19!118;UBERON:0000477!1.96e-17!286;UBERON:0000490!2.94e-16!138;UBERON:0001637!5.19e-15!42;UBERON:0003509!5.19e-15!42;UBERON:0004572!5.19e-15!42;UBERON:0000483!8.74e-15!309;UBERON:0000119!4.49e-14!312;UBERON:0006914!2.76e-13!25;UBERON:0004111!7.36e-13!241;UBERON:0001986!1.12e-12!18;UBERON:0004638!1.12e-12!18;UBERON:0004852!1.12e-12!18;UBERON:0004573!1.76e-12!33;UBERON:0004571!1.76e-12!33;UBERON:0000487!8.15e-12!22;UBERON:0000468!2.99e-11!659;UBERON:0002385!2.90e-10!63;UBERON:0001015!2.90e-10!63;UBERON:0000383!2.90e-10!63;UBERON:0001134!3.68e-10!61;UBERON:0002036!3.68e-10!61;UBERON:0003082!3.68e-10!61;UBERON:0000025!7.49e-10!194;UBERON:0000947!9.35e-10!21;UBERON:0010191!9.35e-10!21;UBERON:0000467!2.13e-09!625;UBERON:0000486!2.16e-09!82;UBERON:0000480!3.09e-09!626;UBERON:0000475!1.82e-08!365;UBERON:0007100!2.19e-08!27;UBERON:0000948!2.65e-08!24;UBERON:0005498!2.65e-08!24;UBERON:0004140!2.65e-08!24;UBERON:0009881!2.65e-08!24;UBERON:0004141!2.65e-08!24;UBERON:0003084!2.65e-08!24;UBERON:0007005!2.65e-08!24;UBERON:0004139!2.65e-08!24;UBERON:0004291!2.65e-08!24;UBERON:0004290!9.44e-08!70;UBERON:0000914!4.61e-07!83;UBERON:0002329!4.61e-07!83;UBERON:0003077!4.61e-07!83;UBERON:0003059!4.61e-07!83;UBERON:0007282!4.61e-07!83;UBERON:0009618!4.61e-07!83;UBERON:0007285!4.61e-07!83;UBERON:0003915!5.09e-07!9;UBERON:0004700!5.09e-07!9;UBERON:0001917!5.09e-07!9;UBERON:0002100!7.11e-07!216;UBERON:0005256!7.79e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.59e-16;18!UBERON:0001986;1.59e-16;18!UBERON:0004852;1.59e-16;18!UBERON:0006914;6.43e-16;25!UBERON:0000487;6.04e-15;22!UBERON:0001637;1.04e-13;42!UBERON:0003509;1.04e-13;42!UBERON:0004572;1.04e-13;42!UBERON:0000055;8.74e-13;65!UBERON:0007500;9.50e-13;56!UBERON:0001981;9.50e-13;56!UBERON:0004537;9.50e-13;56!UBERON:0004573;1.07e-12;33!UBERON:0004571;1.07e-12;33!UBERON:0002049;1.67e-12;75!UBERON:0007798;1.67e-12;75!UBERON:0000947;1.96e-10;21!UBERON:0010191;1.96e-10;21!UBERON:0000490;9.20e-10;33!UBERON:0003915;5.14e-09;9!UBERON:0004700;5.14e-09;9!UBERON:0001917;5.14e-09;9!UBERON:0001009;4.51e-08;112!UBERON:0003914;5.47e-08;74!UBERON:0004535;1.07e-07;109!UBERON:0001638;2.62e-07;9!UBERON:0003920;2.62e-07;9!UBERON:0004582;2.62e-07;9!UBERON:0004457;3.56e-07;9!UBERON:0000042;3.56e-07;9!UBERON:0000948;8.80e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.85e-28,78;UBERON:0007798,1.85e-28,78;UBERON:0004872,1.89e-27,83;UBERON:0000055,7.56e-26,68;UBERON:0004535,1.80e-25,109;UBERON:0001009,4.42e-24,112;UBERON:0007500,8.01e-23,59;UBERON:0001981,8.01e-23,59;UBERON:0004537,8.01e-23,59;UBERON:0006965,8.01e-23,59;UBERON:0003914,3.39e-21,117;UBERON:0004638,1.30e-16,18;UBERON:0001986,1.30e-16,18;UBERON:0004852,1.30e-16,18;UBERON:0006914,4.42e-16,25;UBERON:0001637,5.70e-16,42;UBERON:0003509,5.70e-16,42;UBERON:0004572,5.70e-16,42;UBERON:0000487,4.11e-15,22;UBERON:0000490,7.86e-14,148;UBERON:0004573,6.71e-13,33;UBERON:0004571,6.71e-13,33;UBERON:0000947,1.99e-10,21;UBERON:0010191,1.99e-10,21;UBERON:0000483,2.72e-09,306;UBERON:0003915,5.85e-09,9;UBERON:0004700,5.85e-09,9;UBERON:0001917,5.85e-09,9;UBERON:0000119,6.46e-09,309;UBERON:0004111,3.65e-08,240;UBERON:0000948,6.63e-08,24;UBERON:0005498,6.63e-08,24;UBERON:0004140,6.63e-08,24;UBERON:0009881,6.63e-08,24;UBERON:0004141,6.63e-08,24;UBERON:0003084,6.63e-08,24;UBERON:0007005,6.63e-08,24;UBERON:0004139,6.63e-08,24;UBERON:0004291,6.63e-08,24;UBERON:0001134,7.36e-08,62;UBERON:0002036,7.36e-08,62;UBERON:0003082,7.36e-08,62;UBERON:0002385,7.75e-08,64;UBERON:0001015,7.75e-08,64;UBERON:0000383,7.75e-08,64;UBERON:0000025,1.80e-07,192;UBERON:0001638,2.19e-07,9;UBERON:0003920,2.19e-07,9;UBERON:0004582,2.19e-07,9;UBERON:0000926,8.54e-07,315;UBERON:0004120,8.54e-07,315;UBERON:0006603,8.54e-07,315 | |||
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| |||
|short_description=p@chr2:56145014..56145064,+ | |||
}} |
Revision as of 03:17, 21 January 2014
Short description: | p@chr2:56145014..56145064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56145014..56145064, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.46e-29 | 121 |
lining cell | 9.20e-23 | 58 |
barrier cell | 9.20e-23 | 58 |
endothelial cell of vascular tree | 2.62e-22 | 24 |
meso-epithelial cell | 2.23e-17 | 45 |
blood vessel endothelial cell | 1.30e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.30e-16 | 18 |
endothelial cell | 1.45e-16 | 36 |
embryonic cell | 8.20e-13 | 250 |
fibroblast | 1.15e-11 | 76 |
squamous epithelial cell | 2.32e-11 | 63 |
muscle cell | 1.35e-09 | 55 |
muscle precursor cell | 4.14e-09 | 58 |
myoblast | 4.14e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.14e-09 | 58 |
endothelial cell of artery | 5.85e-09 | 9 |
electrically responsive cell | 1.18e-07 | 61 |
electrically active cell | 1.18e-07 | 61 |
smooth muscle cell | 1.29e-07 | 43 |
smooth muscle myoblast | 1.29e-07 | 43 |
lymphangioblast | 2.89e-07 | 6 |
endothelial cell of lymphatic vessel | 2.89e-07 | 6 |
vascular lymphangioblast | 2.89e-07 | 6 |
vascular associated smooth muscle cell | 3.29e-07 | 32 |