FFCP PHASE1:Mm9::chr12:112908837..112908848,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112908837..112908848,-|id=chr12:112908837..112908848,-|ontology_enrichment_celltype=CL:0002453!1.27e-10!8;CL:0000333!5.50e-10!10;CL:0000095!5.50e-10!10;CL:0000243!5.50e-10!10;CL:0000123!5.50e-10!10;CL:0000125!5.50e-10!10;CL:0000030!5.50e-10!10;CL:0000339!5.50e-10!10;CL:0000128!1.29e-07!6;CL:0000126!1.29e-07!6;CL:0000127!1.29e-07!6|ontology_enrichment_celltype_v019_2=CL:0002453,6.43e-37,8;CL:0000333,1.90e-29,10;CL:0000095,1.90e-29,10;CL:0000243,1.90e-29,10;CL:0000123,1.90e-29,10;CL:0000125,1.90e-29,10;CL:0000030,1.90e-29,10;CL:0000339,1.90e-29,10;CL:0000128,1.58e-25,6;CL:0000126,1.58e-25,6;CL:0000127,1.58e-25,6;CL:0002605,2.42e-13,2;CL:0002604,2.42e-13,2;CL:0000878,3.20e-13,2;CL:0000129,3.20e-13,2;CL:0002319,2.01e-10,43;CL:0000221,3.67e-10,44;CL:0000133,3.67e-10,44;CL:0002194,4.85e-07,4;CL:0000766,4.85e-07,4;CL:0000234,4.85e-07,4;CL:0000576,4.85e-07,4;CL:0000235,4.85e-07,4;CL:0000864,4.85e-07,4;CL:0002009,4.85e-07,4;CL:0000040,4.85e-07,4;CL:0000559,4.85e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.95e-12!75;UBERON:0001016!1.95e-12!75;UBERON:0001017!3.91e-12!73;UBERON:0005743!3.91e-12!73;UBERON:0002616!1.38e-11!49;UBERON:0000955!3.22e-11!50;UBERON:0006238!3.22e-11!50;UBERON:0000033!3.86e-11!63;UBERON:0004121!2.00e-10!102;UBERON:0000924!2.00e-10!102;UBERON:0006601!2.00e-10!102;UBERON:0001049!2.35e-10!52;UBERON:0005068!2.35e-10!52;UBERON:0006241!2.35e-10!52;UBERON:0007135!2.35e-10!52;UBERON:0002346!5.20e-08!71;UBERON:0003075!5.20e-08!71;UBERON:0007284!5.20e-08!71;UBERON:0003076!3.18e-07!12;UBERON:0003057!3.18e-07!12;UBERON:0004733!4.16e-07!6;UBERON:0004732!4.16e-07!6;UBERON:0002028!4.16e-07!6;UBERON:0007277!4.16e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0004733,9.54e-16,6;UBERON:0004732,9.54e-16,6;UBERON:0002028,9.54e-16,6;UBERON:0007277,9.54e-16,6;UBERON:0002037,7.73e-14,4;UBERON:0002680,7.73e-14,4;UBERON:0001895,7.73e-14,4;UBERON:0010092,7.73e-14,4;UBERON:0006215,7.73e-14,4;UBERON:0001017,2.30e-10,73;UBERON:0001016,4.79e-10,75;UBERON:0003076,5.41e-08,12;UBERON:0003057,5.41e-08,12;UBERON:0004121,1.34e-07,95;UBERON:0000924,1.34e-07,95;UBERON:0006601,1.34e-07,95;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,3.73466510648602,9.3326351555656,3.21968769738334,10.062679505548,0,0,0,0,0,0,0,0,0,1.69422266034566,0.889294796111139,0,0,0,2.99600110518405,13.0634223809329,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,0.127687338085188,0.921639199537461,0,0,0,2.51264699101243,0,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,3.14170060220183,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0.648965052271031,0.101839363850316,0,0,0,0.130120442962704,0,0.360124259610698,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,1.87737366450968,0.21183207086382,0.441056796109924,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0,0,1.00314420807073,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr12:112908837..112908848,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:112908837..112908848,- | |||
|description=CAGE_peak_at_chr12:112908837..112908848,- | |||
|id=chr12:112908837..112908848,- | |||
|ontology_enrichment_celltype=CL:0002453!1.27e-10!8;CL:0000333!5.50e-10!10;CL:0000095!5.50e-10!10;CL:0000243!5.50e-10!10;CL:0000123!5.50e-10!10;CL:0000125!5.50e-10!10;CL:0000030!5.50e-10!10;CL:0000339!5.50e-10!10;CL:0000128!1.29e-07!6;CL:0000126!1.29e-07!6;CL:0000127!1.29e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.43e-37,8;CL:0000333,1.90e-29,10;CL:0000095,1.90e-29,10;CL:0000243,1.90e-29,10;CL:0000123,1.90e-29,10;CL:0000125,1.90e-29,10;CL:0000030,1.90e-29,10;CL:0000339,1.90e-29,10;CL:0000128,1.58e-25,6;CL:0000126,1.58e-25,6;CL:0000127,1.58e-25,6;CL:0002605,2.42e-13,2;CL:0002604,2.42e-13,2;CL:0000878,3.20e-13,2;CL:0000129,3.20e-13,2;CL:0002319,2.01e-10,43;CL:0000221,3.67e-10,44;CL:0000133,3.67e-10,44;CL:0002194,4.85e-07,4;CL:0000766,4.85e-07,4;CL:0000234,4.85e-07,4;CL:0000576,4.85e-07,4;CL:0000235,4.85e-07,4;CL:0000864,4.85e-07,4;CL:0002009,4.85e-07,4;CL:0000040,4.85e-07,4;CL:0000559,4.85e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.95e-12!75;UBERON:0001016!1.95e-12!75;UBERON:0001017!3.91e-12!73;UBERON:0005743!3.91e-12!73;UBERON:0002616!1.38e-11!49;UBERON:0000955!3.22e-11!50;UBERON:0006238!3.22e-11!50;UBERON:0000033!3.86e-11!63;UBERON:0004121!2.00e-10!102;UBERON:0000924!2.00e-10!102;UBERON:0006601!2.00e-10!102;UBERON:0001049!2.35e-10!52;UBERON:0005068!2.35e-10!52;UBERON:0006241!2.35e-10!52;UBERON:0007135!2.35e-10!52;UBERON:0002346!5.20e-08!71;UBERON:0003075!5.20e-08!71;UBERON:0007284!5.20e-08!71;UBERON:0003076!3.18e-07!12;UBERON:0003057!3.18e-07!12;UBERON:0004733!4.16e-07!6;UBERON:0004732!4.16e-07!6;UBERON:0002028!4.16e-07!6;UBERON:0007277!4.16e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,9.54e-16,6;UBERON:0004732,9.54e-16,6;UBERON:0002028,9.54e-16,6;UBERON:0007277,9.54e-16,6;UBERON:0002037,7.73e-14,4;UBERON:0002680,7.73e-14,4;UBERON:0001895,7.73e-14,4;UBERON:0010092,7.73e-14,4;UBERON:0006215,7.73e-14,4;UBERON:0001017,2.30e-10,73;UBERON:0001016,4.79e-10,75;UBERON:0003076,5.41e-08,12;UBERON:0003057,5.41e-08,12;UBERON:0004121,1.34e-07,95;UBERON:0000924,1.34e-07,95;UBERON:0006601,1.34e-07,95;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,3.73466510648602,9.3326351555656,3.21968769738334,10.062679505548,0,0,0,0,0,0,0,0,0,1.69422266034566,0.889294796111139,0,0,0,2.99600110518405,13.0634223809329,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,0.127687338085188,0.921639199537461,0,0,0,2.51264699101243,0,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,3.14170060220183,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0.648965052271031,0.101839363850316,0,0,0,0.130120442962704,0,0.360124259610698,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,1.87737366450968,0.21183207086382,0.441056796109924,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0,0,1.00314420807073,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:112908837..112908848,- | |||
}} |
Latest revision as of 18:33, 4 August 2015
Short description: | p@chr12:112908837..112908848, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112908837..112908848, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.43e-37 | 8 |
migratory neural crest cell | 1.90e-29 | 10 |
neuron associated cell | 1.90e-29 | 10 |
glial cell (sensu Vertebrata) | 1.90e-29 | 10 |
neuron associated cell (sensu Vertebrata) | 1.90e-29 | 10 |
glial cell | 1.90e-29 | 10 |
glioblast | 1.90e-29 | 10 |
glioblast (sensu Vertebrata) | 1.90e-29 | 10 |
oligodendrocyte | 1.58e-25 | 6 |
macroglial cell | 1.58e-25 | 6 |
astrocyte | 1.58e-25 | 6 |
astrocyte of the cerebral cortex | 2.42e-13 | 2 |
astrocyte of the hippocampus | 2.42e-13 | 2 |
central nervous system macrophage | 3.20e-13 | 2 |
microglial cell | 3.20e-13 | 2 |
neural cell | 2.01e-10 | 43 |
ectodermal cell | 3.67e-10 | 44 |
neurectodermal cell | 3.67e-10 | 44 |
monopoietic cell | 4.85e-07 | 4 |
myeloid leukocyte | 4.85e-07 | 4 |
phagocyte | 4.85e-07 | 4 |
monocyte | 4.85e-07 | 4 |
macrophage | 4.85e-07 | 4 |
tissue-resident macrophage | 4.85e-07 | 4 |
macrophage dendritic cell progenitor | 4.85e-07 | 4 |
monoblast | 4.85e-07 | 4 |
promonocyte | 4.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 9.54e-16 | 6 |
segmental subdivision of nervous system | 9.54e-16 | 6 |
hindbrain | 9.54e-16 | 6 |
presumptive hindbrain | 9.54e-16 | 6 |
cerebellum | 7.73e-14 | 4 |
regional part of metencephalon | 7.73e-14 | 4 |
metencephalon | 7.73e-14 | 4 |
future metencephalon | 7.73e-14 | 4 |
rhombic lip | 7.73e-14 | 4 |
central nervous system | 2.30e-10 | 73 |
nervous system | 4.79e-10 | 75 |
posterior neural tube | 5.41e-08 | 12 |
chordal neural plate | 5.41e-08 | 12 |
ectoderm-derived structure | 1.34e-07 | 95 |
ectoderm | 1.34e-07 | 95 |
presumptive ectoderm | 1.34e-07 | 95 |
seminal vesicle | 8.26e-07 | 1 |
vesicular gland | 8.26e-07 | 1 |
seminal fluid secreting gland | 8.26e-07 | 1 |