FFCP PHASE1:Mm9::chr13:83803326..83803335,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83803326..83803335,+|id=chr13:83803326..83803335,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.51e-10!10;UBERON:0000411!7.51e-10!10;UBERON:0001950!7.51e-10!10;UBERON:0000956!8.79e-09!21;UBERON:0001869!8.79e-09!21;UBERON:0000203!8.79e-09!21;UBERON:0002619!5.32e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.27e-40,10;UBERON:0000411,1.27e-40,10;UBERON:0001950,1.27e-40,10;UBERON:0000956,6.20e-24,21;UBERON:0001869,6.20e-24,21;UBERON:0000203,6.20e-24,21;UBERON:0002619,1.19e-23,17;UBERON:0003528,4.28e-17,29;UBERON:0002791,4.28e-17,29;UBERON:0001893,4.28e-17,29;UBERON:0002020,1.90e-14,34;UBERON:0002780,1.78e-12,39;UBERON:0001890,1.78e-12,39;UBERON:0006240,1.78e-12,39;UBERON:0003080,3.86e-12,40;UBERON:0002616,1.98e-10,46;UBERON:0000955,3.47e-10,47;UBERON:0006238,3.47e-10,47;UBERON:0003056,9.91e-10,49;UBERON:0001049,4.13e-09,52;UBERON:0005068,4.13e-09,52;UBERON:0006241,4.13e-09,52;UBERON:0007135,4.13e-09,52;UBERON:0000073,9.78e-09,54;UBERON:0001851,1.14e-07,1;UBERON:0005889,1.14e-07,1;UBERON:0001374,2.37e-07,1;UBERON:0004252,2.37e-07,1;UBERON:0003663,2.37e-07,1;UBERON:0005090,2.37e-07,1;UBERON:0001630,2.37e-07,1;UBERON:0003661,2.37e-07,1;UBERON:0010890,2.37e-07,1;UBERON:0001383,2.37e-07,1;UBERON:0002346,3.29e-07,64;UBERON:0003075,3.29e-07,64;UBERON:0007284,3.29e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0.340173160604279,0.496454756004426,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0,0,0.489963196859816,0.191690942036473,0,0,0.510749352340751,0,0,0,0,0,0,0,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0,0,0,0.144599356919912,0,0.808834249737046,0.662524555381181,1.45462575940567,0,0,0,0,0.838705871541442,0.599902730993408,0.635351135365324,0.149790639404823,0.457500602818626,0.251308704225729,1.39059456153821,2.81287003063364,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0.930135779001631,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.658650345873152,0,0.420579897128254,0,0,0,0,0.928946687441754,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.295220295959204,0,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,1.26235463602186,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0.690999869022119,0,0,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,4.51801474093653,0.920650473014354,5.15605962095457,6.18671456437275,4.11049511862385,0.755393897389701,3.37511250115903,3.15224842256954,1.35942722695261,2.07104124700728,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0,0,0.618105171716683,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.593175090620871,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0.441182838239031,0.231867835620421|short_description=p@chr13:83803326..83803335,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:83803326..83803335,+ | |||
|description=CAGE_peak_at_chr13:83803326..83803335,+ | |||
|id=chr13:83803326..83803335,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.51e-10!10;UBERON:0000411!7.51e-10!10;UBERON:0001950!7.51e-10!10;UBERON:0000956!8.79e-09!21;UBERON:0001869!8.79e-09!21;UBERON:0000203!8.79e-09!21;UBERON:0002619!5.32e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.27e-40,10;UBERON:0000411,1.27e-40,10;UBERON:0001950,1.27e-40,10;UBERON:0000956,6.20e-24,21;UBERON:0001869,6.20e-24,21;UBERON:0000203,6.20e-24,21;UBERON:0002619,1.19e-23,17;UBERON:0003528,4.28e-17,29;UBERON:0002791,4.28e-17,29;UBERON:0001893,4.28e-17,29;UBERON:0002020,1.90e-14,34;UBERON:0002780,1.78e-12,39;UBERON:0001890,1.78e-12,39;UBERON:0006240,1.78e-12,39;UBERON:0003080,3.86e-12,40;UBERON:0002616,1.98e-10,46;UBERON:0000955,3.47e-10,47;UBERON:0006238,3.47e-10,47;UBERON:0003056,9.91e-10,49;UBERON:0001049,4.13e-09,52;UBERON:0005068,4.13e-09,52;UBERON:0006241,4.13e-09,52;UBERON:0007135,4.13e-09,52;UBERON:0000073,9.78e-09,54;UBERON:0001851,1.14e-07,1;UBERON:0005889,1.14e-07,1;UBERON:0001374,2.37e-07,1;UBERON:0004252,2.37e-07,1;UBERON:0003663,2.37e-07,1;UBERON:0005090,2.37e-07,1;UBERON:0001630,2.37e-07,1;UBERON:0003661,2.37e-07,1;UBERON:0010890,2.37e-07,1;UBERON:0001383,2.37e-07,1;UBERON:0002346,3.29e-07,64;UBERON:0003075,3.29e-07,64;UBERON:0007284,3.29e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0.340173160604279,0.496454756004426,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0,0,0.489963196859816,0.191690942036473,0,0,0.510749352340751,0,0,0,0,0,0,0,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0,0,0,0.144599356919912,0,0.808834249737046,0.662524555381181,1.45462575940567,0,0,0,0,0.838705871541442,0.599902730993408,0.635351135365324,0.149790639404823,0.457500602818626,0.251308704225729,1.39059456153821,2.81287003063364,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0.930135779001631,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.658650345873152,0,0.420579897128254,0,0,0,0,0.928946687441754,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.295220295959204,0,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,1.26235463602186,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0.690999869022119,0,0,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,4.51801474093653,0.920650473014354,5.15605962095457,6.18671456437275,4.11049511862385,0.755393897389701,3.37511250115903,3.15224842256954,1.35942722695261,2.07104124700728,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0,0,0.618105171716683,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.593175090620871,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr13:83803326..83803335,+ | |||
}} |
Latest revision as of 09:00, 6 August 2015
Short description: | p@chr13:83803326..83803335, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83803326..83803335, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.27e-40 | 10 |
visual cortex | 1.27e-40 | 10 |
neocortex | 1.27e-40 | 10 |
cerebral cortex | 6.20e-24 | 21 |
cerebral hemisphere | 6.20e-24 | 21 |
pallium | 6.20e-24 | 21 |
regional part of cerebral cortex | 1.19e-23 | 17 |
brain grey matter | 4.28e-17 | 29 |
regional part of telencephalon | 4.28e-17 | 29 |
telencephalon | 4.28e-17 | 29 |
gray matter | 1.90e-14 | 34 |
regional part of forebrain | 1.78e-12 | 39 |
forebrain | 1.78e-12 | 39 |
future forebrain | 1.78e-12 | 39 |
anterior neural tube | 3.86e-12 | 40 |
regional part of brain | 1.98e-10 | 46 |
brain | 3.47e-10 | 47 |
future brain | 3.47e-10 | 47 |
pre-chordal neural plate | 9.91e-10 | 49 |
neural tube | 4.13e-09 | 52 |
neural rod | 4.13e-09 | 52 |
future spinal cord | 4.13e-09 | 52 |
neural keel | 4.13e-09 | 52 |
regional part of nervous system | 9.78e-09 | 54 |
cortex | 1.14e-07 | 1 |
zygote cortex | 1.14e-07 | 1 |
biceps femoris | 2.37e-07 | 1 |
hindlimb stylopod muscle | 2.37e-07 | 1 |
hindlimb muscle | 2.37e-07 | 1 |
muscle structure | 2.37e-07 | 1 |
muscle organ | 2.37e-07 | 1 |
limb muscle | 2.37e-07 | 1 |
pelvic complex muscle | 2.37e-07 | 1 |
muscle of leg | 2.37e-07 | 1 |
neurectoderm | 3.29e-07 | 64 |
neural plate | 3.29e-07 | 64 |
presumptive neural plate | 3.29e-07 | 64 |