FFCP PHASE1:Hg19::chr3:77129800..77129824,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1201 | |||
|description=CAGE_peak_at_chr3:77129800..77129824,+ | |||
|id=chr3:77129800..77129824,+ | |||
|ontology_enrichment_celltype=CL:0002557!3.91e-19!1;CL:0002605!2.63e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease=DOID:5409!3.92e-19!4;DOID:1325!2.30e-11!7;DOID:3904!2.30e-11!7;DOID:3905!4.80e-09!9 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.89e-37!2;UBERON:0002757!1.89e-37!2;UBERON:0010134!1.89e-37!2;UBERON:0002784!1.89e-37!2;UBERON:0005408!1.89e-37!2;UBERON:0001899!1.89e-37!2;UBERON:0003296!2.71e-19!4;UBERON:0010133!2.71e-19!4;UBERON:0001894!1.87e-11!7;UBERON:0006222!1.87e-11!7;UBERON:0002360!2.07e-10!2;UBERON:0000094!2.07e-10!2;UBERON:0007645!2.07e-10!2;UBERON:0007497!2.99e-10!2;UBERON:0003643!2.99e-10!2;UBERON:0003504!2.99e-10!2;UBERON:0003469!2.99e-10!2;UBERON:0003496!2.99e-10!2;UBERON:0004797!2.99e-10!2;UBERON:0002012!2.99e-10!2;UBERON:0008886!2.99e-10!2;UBERON:0007303!2.99e-10!2;UBERON:0002061!2.99e-10!2;UBERON:0005432!2.99e-10!2;UBERON:0004363!2.99e-10!2;UBERON:0003075!2.36e-07!86;UBERON:0007284!2.36e-07!86;UBERON:0010188!2.97e-07!3;UBERON:0002539!2.97e-07!3;UBERON:0004145!2.97e-07!3;UBERON:0008816!2.97e-07!3;UBERON:0002346!5.10e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.34e-79;2!UBERON:0002757;2.34e-79;2!UBERON:0010134;2.34e-79;2!UBERON:0005408;2.34e-79;2!UBERON:0001899;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002784;2.22e-40;4!UBERON:0001894;1.28e-23;7!UBERON:0002360;6.30e-21;2!UBERON:0000094;6.30e-21;2!UBERON:0010743;6.30e-21;2!UBERON:0000966;3.35e-09;5!UBERON:0005388;3.35e-09;5!UBERON:0001802;3.35e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.34e-79,2;UBERON:0002757,2.34e-79,2;UBERON:0010134,2.34e-79,2;UBERON:0005408,2.34e-79,2;UBERON:0001899,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0002784,2.22e-40,4;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0002360,6.96e-21,2;UBERON:0000094,6.96e-21,2;UBERON:0010743,6.96e-21,2;UBERON:0001017,2.75e-08,81;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0001016,1.56e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8923715992532,22.86729311088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,27.7050102198481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:77129800..77129824,+ | |||
}} |
Revision as of 19:53, 21 January 2014
Short description: | p@chr3:77129800..77129824, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:77129800..77129824, + |
Coexpression cluster: | C1201_pineal_small_retinoblastoma_medulloblastoma_eye_retina_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.34e-79 | 2 |
regional part of epithalamus | 2.34e-79 | 2 |
secretory circumventricular organ | 2.34e-79 | 2 |
circumventricular organ | 2.34e-79 | 2 |
epithalamus | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
regional part of diencephalon | 2.22e-40 | 4 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
meninx | 6.96e-21 | 2 |
membrane organ | 6.96e-21 | 2 |
meningeal cluster | 6.96e-21 | 2 |
central nervous system | 2.75e-08 | 81 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
nervous system | 1.56e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |