FFCP PHASE1:Hg19::chr5:78281092..78281154,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |||
|TSSclassifier=strong | |||
|UniProt=P15848 | |||
|association_with_transcript=453bp_to_ENST00000264914_5end | |||
|description=CAGE_peak_1_at_ARSB_5end | |||
|id=chr5:78281092..78281154,- | |||
|ontology_enrichment_celltype=CL:0000048!7.71e-44!430;CL:0000723!1.28e-40!436;CL:0000034!2.08e-39!444;CL:0000134!3.54e-39!358;CL:0002320!2.90e-38!365;CL:0000763!7.94e-35!112;CL:0000049!7.94e-35!112;CL:0000766!1.31e-34!76;CL:0000557!8.50e-33!71;CL:0002009!5.69e-31!65;CL:0000219!1.85e-30!390;CL:0002194!8.49e-30!63;CL:0000576!8.49e-30!63;CL:0000040!8.49e-30!63;CL:0000559!8.49e-30!63;CL:0000839!4.53e-29!70;CL:0000988!5.27e-27!182;CL:0000037!1.17e-25!172;CL:0000566!1.17e-25!172;CL:0000738!2.16e-24!140;CL:0002032!4.70e-24!165;CL:0000837!4.70e-24!165;CL:0002057!7.80e-23!42;CL:0000860!1.97e-19!45;CL:0002371!2.15e-19!591;CL:0002031!1.79e-17!124;CL:0002087!2.08e-17!119;CL:0000144!5.21e-16!625;CL:0000451!7.31e-08!10;CL:0000990!6.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.18e-18;39!CL:0000234;5.18e-18;39!CL:0000860;2.48e-17;33!CL:0002057;2.48e-17;33!CL:0000576;3.88e-17;48!CL:0000766;9.30e-16;69!CL:0000763;1.36e-10;100!CL:0000451;6.41e-08;10!CL:0000738;2.78e-07;136!CL:0000990;6.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.15e-45,427;CL:0000723,4.79e-42,433;CL:0000034,9.24e-41,441;CL:0000134,9.88e-41,354;CL:0002320,8.81e-40,361;CL:0000766,1.42e-37,72;CL:0000763,7.05e-37,108;CL:0000049,7.05e-37,108;CL:0000557,8.41e-36,67;CL:0002009,4.62e-34,61;CL:0002194,7.16e-33,59;CL:0000576,7.16e-33,59;CL:0000040,7.16e-33,59;CL:0000559,7.16e-33,59;CL:0000839,8.00e-32,66;CL:0000219,1.06e-31,386;CL:0000988,2.45e-28,177;CL:0000473,5.58e-27,48;CL:0000234,5.58e-27,48;CL:0000037,1.11e-26,168;CL:0000738,1.23e-25,136;CL:0002032,5.41e-25,161;CL:0000837,5.41e-25,161;CL:0000860,7.14e-23,42;CL:0002057,7.14e-23,42;CL:0002031,1.85e-18,120;CL:0002087,2.01e-18,115;CL:0000451,7.12e-08,10;CL:0000990,6.78e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.45e-17;42!CL:0000049;1.24e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.21e-37!375;UBERON:0002390!2.86e-35!102;UBERON:0003061!2.86e-35!102;UBERON:0002193!5.20e-34!112;UBERON:0002371!2.92e-32!80;UBERON:0003081!2.46e-31!216;UBERON:0001474!1.53e-28!86;UBERON:0002204!6.89e-28!167;UBERON:0004765!3.19e-26!101;UBERON:0001434!3.19e-26!101;UBERON:0002405!6.92e-26!115;UBERON:0000479!1.53e-10!787;UBERON:0004535!2.07e-09!110;UBERON:0001009!3.97e-09!113;UBERON:0000926!8.83e-08!448;UBERON:0004120!8.83e-08!448;UBERON:0006603!8.83e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.82e-39,371;UBERON:0002390,1.26e-37,98;UBERON:0003061,1.26e-37,98;UBERON:0002193,3.95e-36,108;UBERON:0003081,4.76e-35,203;UBERON:0002371,6.11e-35,76;UBERON:0002405,3.99e-31,93;UBERON:0001474,1.09e-30,82;UBERON:0002204,1.35e-27,167;UBERON:0004765,3.25e-26,90;UBERON:0001434,4.50e-26,100;UBERON:0000926,2.05e-25,315;UBERON:0004120,2.05e-25,315;UBERON:0006603,2.05e-25,315;UBERON:0000479,2.22e-13,773;UBERON:0004535,3.84e-09,109;UBERON:0001009,7.27e-09,112 | |||
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| |||
|short_description=p1@ARSB | |||
}} |
Revision as of 06:07, 22 January 2014
Short description: | p1@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARSB_5end |
Coexpression cluster: | NA |
Association with transcript: | 453bp_to_ENST00000264914_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | P15848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.15e-45 | 427 |
somatic stem cell | 4.79e-42 | 433 |
stem cell | 9.24e-41 | 441 |
mesenchymal cell | 9.88e-41 | 354 |
connective tissue cell | 8.81e-40 | 361 |
myeloid leukocyte | 1.42e-37 | 72 |
myeloid cell | 7.05e-37 | 108 |
common myeloid progenitor | 7.05e-37 | 108 |
granulocyte monocyte progenitor cell | 8.41e-36 | 67 |
macrophage dendritic cell progenitor | 4.62e-34 | 61 |
monopoietic cell | 7.16e-33 | 59 |
monocyte | 7.16e-33 | 59 |
monoblast | 7.16e-33 | 59 |
promonocyte | 7.16e-33 | 59 |
myeloid lineage restricted progenitor cell | 8.00e-32 | 66 |
motile cell | 1.06e-31 | 386 |
hematopoietic cell | 2.45e-28 | 177 |
defensive cell | 5.58e-27 | 48 |
phagocyte | 5.58e-27 | 48 |
hematopoietic stem cell | 1.11e-26 | 168 |
leukocyte | 1.23e-25 | 136 |
hematopoietic oligopotent progenitor cell | 5.41e-25 | 161 |
hematopoietic multipotent progenitor cell | 5.41e-25 | 161 |
classical monocyte | 7.14e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.14e-23 | 42 |
hematopoietic lineage restricted progenitor cell | 1.85e-18 | 120 |
nongranular leukocyte | 2.01e-18 | 115 |
dendritic cell | 7.12e-08 | 10 |
conventional dendritic cell | 6.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.82e-39 | 371 |
hematopoietic system | 1.26e-37 | 98 |
blood island | 1.26e-37 | 98 |
hemolymphoid system | 3.95e-36 | 108 |
lateral plate mesoderm | 4.76e-35 | 203 |
bone marrow | 6.11e-35 | 76 |
immune system | 3.99e-31 | 93 |
bone element | 1.09e-30 | 82 |
musculoskeletal system | 1.35e-27 | 167 |
skeletal element | 3.25e-26 | 90 |
skeletal system | 4.50e-26 | 100 |
mesoderm | 2.05e-25 | 315 |
mesoderm-derived structure | 2.05e-25 | 315 |
presumptive mesoderm | 2.05e-25 | 315 |
tissue | 2.22e-13 | 773 |
cardiovascular system | 3.84e-09 | 109 |
circulatory system | 7.27e-09 | 112 |