FFCP PHASE1:Hg19::chr5:95158599..95158620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4330 | |||
|TSSclassifier=strong | |||
|UniProt=P35754 | |||
|association_with_transcript=-22bp_to_NM_001118890,NM_001243658,NM_001243659,NM_002064,uc003kln.3,uc003klo.3_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_GLRX_5end | |||
|id=chr5:95158599..95158620,- | |||
|ontology_enrichment_celltype=CL:0002057!1.93e-33!42;CL:0000860!3.22e-31!45;CL:0000766!2.60e-25!76;CL:0002009!6.87e-25!65;CL:0002194!3.20e-23!63;CL:0000576!3.20e-23!63;CL:0000040!3.20e-23!63;CL:0000559!3.20e-23!63;CL:0000557!3.23e-23!71;CL:0000839!4.48e-22!70;CL:0000048!4.03e-17!430;CL:0000723!3.33e-16!436;CL:0000134!1.26e-15!358;CL:0000034!4.94e-15!444;CL:0002320!6.59e-15!365;CL:0000763!7.63e-14!112;CL:0000049!7.63e-14!112;CL:0000219!4.14e-12!390;CL:0000738!5.19e-12!140;CL:0002031!1.48e-10!124;CL:0002087!2.91e-10!119;CL:0002334!6.14e-08!12;CL:0002371!1.07e-07!591;CL:0000144!4.29e-07!625;CL:0000037!4.47e-07!172;CL:0000566!4.47e-07!172;CL:0002032!5.82e-07!165;CL:0000837!5.82e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-94;33!CL:0002057;1.09e-94;33!CL:0000473;4.98e-69;39!CL:0000234;4.98e-69;39!CL:0000576;3.52e-45;48!CL:0000766;8.29e-28;69!CL:0000763;2.09e-14;100!CL:0002087;6.00e-11;104!CL:0002579;3.02e-10;3!CL:0000738;6.26e-09;136!CL:0001014;1.04e-07;2!CL:0001016;1.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.50e-85,42;CL:0002057,4.50e-85,42;CL:0000473,8.51e-78,48;CL:0000234,8.51e-78,48;CL:0002009,9.09e-66,61;CL:0002194,1.97e-60,59;CL:0000576,1.97e-60,59;CL:0000040,1.97e-60,59;CL:0000559,1.97e-60,59;CL:0000557,3.91e-59,67;CL:0000766,1.32e-57,72;CL:0000839,3.55e-53,66;CL:0000763,5.67e-40,108;CL:0000049,5.67e-40,108;CL:0000738,8.73e-30,136;CL:0002031,3.88e-29,120;CL:0002087,6.06e-27,115;CL:0002032,1.12e-23,161;CL:0000837,1.12e-23,161;CL:0000037,2.72e-22,168;CL:0000988,1.13e-20,177;CL:0000134,4.70e-14,354;CL:0002320,1.47e-13,361;CL:0000219,1.33e-12,386;CL:0000048,2.11e-10,427;CL:0000723,4.25e-10,433;CL:0002579,5.02e-10,3;CL:0000034,1.05e-09,441;CL:0001014,7.26e-08,2;CL:0001016,7.26e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-61;42!CL:0000049;6.22e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.25e-24!80;UBERON:0002390!1.31e-22!102;UBERON:0003061!1.31e-22!102;UBERON:0001474!9.53e-21!86;UBERON:0004765!3.18e-20!101;UBERON:0001434!3.18e-20!101;UBERON:0002193!4.84e-20!112;UBERON:0002204!1.52e-18!167;UBERON:0002405!3.68e-17!115;UBERON:0003081!2.14e-14!216;UBERON:0002384!2.06e-13!375;UBERON:0000926!7.21e-09!448;UBERON:0004120!7.21e-09!448;UBERON:0006603!7.21e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.23e-09;6!UBERON:0002358;9.23e-09;6!UBERON:0003684;9.23e-09;6!UBERON:0001178;9.23e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.01e-51,76;UBERON:0001474,9.50e-47,82;UBERON:0004765,8.16e-42,90;UBERON:0002405,3.51e-40,93;UBERON:0002390,5.64e-40,98;UBERON:0003061,5.64e-40,98;UBERON:0001434,9.49e-37,100;UBERON:0002193,1.96e-35,108;UBERON:0002204,1.02e-19,167;UBERON:0003081,9.85e-17,203;UBERON:0002384,6.96e-13,371;UBERON:0000926,1.34e-12,315;UBERON:0004120,1.34e-12,315;UBERON:0006603,1.34e-12,315;UBERON:0003688,9.86e-09,6;UBERON:0002358,9.86e-09,6;UBERON:0003684,9.86e-09,6;UBERON:0001178,9.86e-09,6 | |||
|phase1_expression=0.908391896352783,0.856402095563933,1.69145284915165,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,1.39334510984468,0,0,0,0,0,0,0.553995408531877,1.40381113229099,0.651032612147555,0,0,0.257575567634187,13.9582309228382,9.06902264853143,5.82201746850759,11.1565937714729,4.93401465626191,4.02618282163635,9.20615655430881,4.35473201099471,9.93225365532058,9.65287906062532,7.10033151942209,1.35426486594342,12.9887214284397,4.63940455098338,6.74170453335254,11.3251040177234,10.9115869205872,8.31138263538754,9.56568770541477,10.3721101963249,6.81959600852311,12.1887880224005,6.80862269629368,13.7020894779026,5.27622197039161,4.17186334736161,6.5156653411535,13.3187890579341,16.2042159834528,15.1901945971625,0.422510572623884,0,0.209658645508376,1.12328631146495,1.35159203557356,0.803627933485401,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,3.1811437882044,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0,0,0,0.453728732640084,0.358779271377724,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0.37223371266318,0,0.194874010322397,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.258543431515556,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,1.42636905040718,0.868687840005475,0.61642896765115,0.537182889719687,0,0,0,0.256686072559497,0,0,0,0.167516265334349,0,1.49801404789436,0,0.828831026872071,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0.496215615637554,0.61384789315225,0,1.02511319404561,1.53512174720011,1.12597744800525,1.48418066444991,0.771048469013278,0.710246901252508,0.410635780069046,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0.459257792658427,0.546273504020151,0.131124414959424,0,1.38627606787947,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.974853958525138,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.288109595976299,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,5.84932118033901,1.5476039091159,0,0,0,0.0524545881349981,0.950403028674658,0.717149357331379,0.191915197319445,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0.197611631897944,0,0,1.08803560673895,0.7520696820681,1.22538230705385,0.983617892129413,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0,1.66441758450784,0.568209015825267,0.50313580350515,0.889811221596536,1.14420034198462,0.604923695052956,0.466311601748341,0,0.477890301491107,0,0.155262956876259,1.24411862352257,0.265841714557995,0.521745061811734,0,0.380805212168795,1.22061219961398,0.363697318405119,0.107410557042488,0,0,0,0.343395705182793,0,1.26184898228651,0.192619830407303,0,0,0.453411851024545,0,0,0.358177682162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| |||
|short_description=p5@GLRX | |||
}} |
Revision as of 06:34, 22 January 2014
Short description: | p5@GLRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GLRX_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -22bp_to_NM_001118890, NM_001243658, NM_001243659, NM_002064, uc003kln.3, uc003klo.3_5end |
EntrezGene: | GLRX |
HGNC: | 4330 |
UniProt: | P35754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.01e-51 | 76 |
bone element | 9.50e-47 | 82 |
skeletal element | 8.16e-42 | 90 |
immune system | 3.51e-40 | 93 |
hematopoietic system | 5.64e-40 | 98 |
blood island | 5.64e-40 | 98 |
skeletal system | 9.49e-37 | 100 |
hemolymphoid system | 1.96e-35 | 108 |
musculoskeletal system | 1.02e-19 | 167 |
lateral plate mesoderm | 9.85e-17 | 203 |
connective tissue | 6.96e-13 | 371 |
mesoderm | 1.34e-12 | 315 |
mesoderm-derived structure | 1.34e-12 | 315 |
presumptive mesoderm | 1.34e-12 | 315 |
omentum | 9.86e-09 | 6 |
peritoneum | 9.86e-09 | 6 |
abdominal cavity | 9.86e-09 | 6 |
visceral peritoneum | 9.86e-09 | 6 |