FFCP PHASE1:Hg19::chr6:116600399..116600450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21144 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=91bp_to_uc003pwq.1_5end | |||
|description=CAGE_peak_3_at_DSE_5end | |||
|id=chr6:116600399..116600450,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-16!115;UBERON:0002616!5.33e-09!59;UBERON:0001049!1.34e-08!57;UBERON:0005068!1.34e-08!57;UBERON:0006241!1.34e-08!57;UBERON:0007135!1.34e-08!57;UBERON:0001869!2.61e-08!32;UBERON:0001950!5.07e-08!20;UBERON:0000955!6.85e-08!69;UBERON:0006238!6.85e-08!69;UBERON:0001017!7.35e-08!82;UBERON:0002619!7.89e-08!22;UBERON:0005743!9.34e-08!86;UBERON:0001893!1.21e-07!34;UBERON:0002020!1.29e-07!34;UBERON:0003528!1.29e-07!34;UBERON:0000481!2.52e-07!347;UBERON:0003075!3.31e-07!86;UBERON:0007284!3.31e-07!86;UBERON:0002791!3.86e-07!33;UBERON:0003080!4.49e-07!42;UBERON:0002780!7.54e-07!41;UBERON:0001890!7.54e-07!41;UBERON:0006240!7.54e-07!41;UBERON:0000073!8.10e-07!94;UBERON:0001016!8.10e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.44e-08;20!UBERON:0002619;3.68e-08;22!UBERON:0001869;5.16e-08;32!UBERON:0001893;1.65e-07;34!UBERON:0003528;2.46e-07;34!UBERON:0002020;2.46e-07;34!UBERON:0002791;4.86e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.50e-17,114;UBERON:0000073,7.80e-10,53;UBERON:0002616,7.80e-10,53;UBERON:0001049,3.21e-09,56;UBERON:0005068,3.21e-09,56;UBERON:0006241,3.21e-09,56;UBERON:0007135,3.21e-09,56;UBERON:0001950,5.25e-09,20;UBERON:0001869,5.34e-09,32;UBERON:0001893,1.52e-08,34;UBERON:0003528,1.66e-08,34;UBERON:0002020,1.66e-08,34;UBERON:0000955,2.03e-08,68;UBERON:0006238,2.03e-08,68;UBERON:0002619,2.15e-08,22;UBERON:0001017,2.41e-08,81;UBERON:0002780,7.16e-08,41;UBERON:0001890,7.16e-08,41;UBERON:0003080,7.16e-08,41;UBERON:0006240,7.16e-08,41;UBERON:0002791,7.89e-08,32;UBERON:0003075,3.34e-07,82;UBERON:0007284,3.34e-07,82;UBERON:0001016,8.86e-07,89 | |||
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| |||
|short_description=p3@DSE | |||
}} |
Revision as of 13:32, 22 January 2014
Short description: | p3@DSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DSE_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_uc003pwq.1_5end |
EntrezGene: | DSE |
HGNC: | 21144 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.50e-17 | 114 |
regional part of nervous system | 7.80e-10 | 53 |
regional part of brain | 7.80e-10 | 53 |
neural tube | 3.21e-09 | 56 |
neural rod | 3.21e-09 | 56 |
future spinal cord | 3.21e-09 | 56 |
neural keel | 3.21e-09 | 56 |
neocortex | 5.25e-09 | 20 |
cerebral hemisphere | 5.34e-09 | 32 |
telencephalon | 1.52e-08 | 34 |
brain grey matter | 1.66e-08 | 34 |
gray matter | 1.66e-08 | 34 |
brain | 2.03e-08 | 68 |
future brain | 2.03e-08 | 68 |
regional part of cerebral cortex | 2.15e-08 | 22 |
central nervous system | 2.41e-08 | 81 |
regional part of forebrain | 7.16e-08 | 41 |
forebrain | 7.16e-08 | 41 |
anterior neural tube | 7.16e-08 | 41 |
future forebrain | 7.16e-08 | 41 |
regional part of telencephalon | 7.89e-08 | 32 |
neural plate | 3.34e-07 | 82 |
presumptive neural plate | 3.34e-07 | 82 |
nervous system | 8.86e-07 | 89 |